RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 C9orf172C9J069 976 aa22.55■■□□□ 1.2
TTC3-225ENST00000540756 TO15178 435 aa22.55■■□□□ 1.2
TTC3-225ENST00000540756 TSPAN2O60636 221 aa22.55■■□□□ 1.2
TTC3-225ENST00000540756 PLCXD2Q0VAA5 305 aa22.55■■□□□ 1.2
TTC3-225ENST00000540756 C6orf141Q5SZD1 244 aa22.55■■□□□ 1.2
TTC3-225ENST00000540756 STPG1Q5TH74 334 aa22.55■■□□□ 1.2
TTC3-225ENST00000540756 NRMQ8IXM6 262 aa22.55■■□□□ 1.2
TTC3-225ENST00000540756 LIN37Q96GY3 246 aaPredicted RBP22.55■■□□□ 1.2
TTC3-225ENST00000540756 FAM46AQ96IP4 442 aaKnown RBP22.55■■□□□ 1.2
TTC3-225ENST00000540756 POLR2J3Q9H1A7 115 aaKnown RBP22.55■■□□□ 1.2
TTC3-225ENST00000540756 PCNX3Q9H6A9 2034 aa22.55■■□□□ 1.2
TTC3-225ENST00000540756 C9J4A7 227 aa22.55■■□□□ 1.2
TTC3-225ENST00000540756 PSMD4P55036 377 aaKnown RBP22.55■■□□□ 1.2
TTC3-225ENST00000540756 SLC26A5P58743 744 aa22.55■■□□□ 1.2
TTC3-225ENST00000540756 RAB15P59190 212 aa22.55■■□□□ 1.2
TTC3-225ENST00000540756 SMN1Q16637 294 aaKnown RBP22.55■■□□□ 1.2
TTC3-225ENST00000540756 FNDC7Q5VTL7 733 aa22.55■■□□□ 1.2
TTC3-225ENST00000540756 ENTHD1Q8IYW4 607 aa22.55■■□□□ 1.2
TTC3-225ENST00000540756 DEFB124Q8NES8 71 aa22.55■■□□□ 1.2
TTC3-225ENST00000540756 ACOT11Q8WXI4 607 aaPredicted RBP22.55■■□□□ 1.2
TTC3-225ENST00000540756 NR4A3Q92570 626 aa22.55■■□□□ 1.2
TTC3-225ENST00000540756 FOXJ2Q9P0K8 574 aa22.55■■□□□ 1.2
TTC3-225ENST00000540756 SYNDIG1LA6NDD5 238 aa22.54■■□□□ 1.2
TTC3-225ENST00000540756 TFAP2AP05549 437 aa22.54■■□□□ 1.2
TTC3-225ENST00000540756 IL12BP29460 328 aa22.54■■□□□ 1.2
TTC3-225ENST00000540756 FMO3P31513 532 aa22.54■■□□□ 1.2
TTC3-225ENST00000540756 IFNA8P32881 189 aa22.54■■□□□ 1.2
TTC3-225ENST00000540756 GGT2P36268 569 aa22.54■■□□□ 1.2
TTC3-225ENST00000540756 OMPP47874 163 aa22.54■■□□□ 1.2
TTC3-225ENST00000540756 IDH2P48735 452 aaKnown RBP22.54■■□□□ 1.2
TTC3-225ENST00000540756 CRISP1P54107 249 aa22.54■■□□□ 1.2
TTC3-225ENST00000540756 CBLN3Q6UW01 205 aa22.54■■□□□ 1.2
TTC3-225ENST00000540756 MARCH9Q86YJ5 346 aa22.54■■□□□ 1.2
TTC3-225ENST00000540756 TAAR9Q96RI9 348 aa22.54■■□□□ 1.2
TTC3-225ENST00000540756 ANKRD19PQ9H560 264 aa22.54■■□□□ 1.2
TTC3-225ENST00000540756 ZBTB20Q9HC78 741 aaPredicted RBP22.54■■□□□ 1.2
TTC3-225ENST00000540756 NXT1Q9UKK6 140 aaKnown RBP22.54■■□□□ 1.2
TTC3-225ENST00000540756 WWP2O00308 870 aa22.53■■□□□ 1.2
TTC3-225ENST00000540756 PLD2O14939 933 aa22.53■■□□□ 1.2
TTC3-225ENST00000540756 FMO6PO60774 539 aa22.53■■□□□ 1.2
TTC3-225ENST00000540756 OSMP13725 252 aa22.53■■□□□ 1.2
TTC3-225ENST00000540756 HPGDP15428 266 aa22.53■■□□□ 1.2
TTC3-225ENST00000540756 RPS18P62269 152 aaKnown RBP22.53■■□□□ 1.2
TTC3-225ENST00000540756 MAD2L1BPQ15013 274 aaPredicted RBP22.53■■□□□ 1.2
TTC3-225ENST00000540756 KCTD21Q4G0X4 260 aa22.53■■□□□ 1.2
TTC3-225ENST00000540756 SLC34A3Q8N130 599 aa22.53■■□□□ 1.2
TTC3-225ENST00000540756 FAM81AQ8TBF8 368 aa22.53■■□□□ 1.2
TTC3-225ENST00000540756 PHOSPHO1Q8TCT1 267 aa22.53■■□□□ 1.2
TTC3-225ENST00000540756 ZNF524Q96C55 264 aa22.53■■□□□ 1.2
TTC3-225ENST00000540756 VMP1Q96GC9 406 aa22.53■■□□□ 1.2
TTC3-225ENST00000540756 APOL4Q9BPW4 351 aa22.53■■□□□ 1.2
TTC3-225ENST00000540756 DSN1Q9H410 356 aa22.53■■□□□ 1.2
TTC3-225ENST00000540756 RNF6Q9Y252 685 aa22.53■■□□□ 1.2
TTC3-225ENST00000540756 A0A1B0GWA3 101 aa22.53■■□□□ 1.2
TTC3-225ENST00000540756 TRIM64A6NGJ6 449 aa22.53■■□□□ 1.2
TTC3-225ENST00000540756 SCDO00767 359 aa22.53■■□□□ 1.2
TTC3-225ENST00000540756 XPNPEP2O43895 674 aa22.53■■□□□ 1.2
TTC3-225ENST00000540756 CLPTM1O96005 669 aa22.53■■□□□ 1.2
TTC3-225ENST00000540756 CELA2AP08217 269 aa22.53■■□□□ 1.2
TTC3-225ENST00000540756 GPR4P46093 362 aa22.53■■□□□ 1.2
TTC3-225ENST00000540756 GTF2A1P52655 376 aaPredicted RBP22.53■■□□□ 1.2
TTC3-225ENST00000540756 PCOLCEQ15113 449 aa22.53■■□□□ 1.2
TTC3-225ENST00000540756 C3orf38Q5JPI3 329 aa22.53■■□□□ 1.2
TTC3-225ENST00000540756 KIF18BQ86Y91 864 aa22.53■■□□□ 1.2
TTC3-225ENST00000540756 CADM2Q8N3J6 435 aa22.53■■□□□ 1.2
TTC3-225ENST00000540756 SETD9Q8NE22 299 aa22.53■■□□□ 1.2
TTC3-225ENST00000540756 OR5M3Q8NGP4 307 aa22.53■■□□□ 1.2
TTC3-225ENST00000540756 PFN4Q8NHR9 129 aa22.53■■□□□ 1.2
TTC3-225ENST00000540756 APH1BQ8WW43 257 aa22.53■■□□□ 1.2
TTC3-225ENST00000540756 HSPBAP1Q96EW2 488 aa22.53■■□□□ 1.2
TTC3-225ENST00000540756 ZNF559Q9BR84 538 aa22.53■■□□□ 1.2
TTC3-225ENST00000540756 MRPS26Q9BYN8 205 aaKnown RBP22.53■■□□□ 1.2
TTC3-225ENST00000540756 CARD8Q9Y2G2 431 aa22.53■■□□□ 1.2
TTC3-225ENST00000540756 PCDHGA1Q9Y5H4 931 aa22.53■■□□□ 1.2
TTC3-225ENST00000540756 EXPH5Q8NEV8 1989 aa22.52■■□□□ 1.2
TTC3-225ENST00000540756 A0A0B4J2E0 115 aa22.52■■□□□ 1.2
TTC3-225ENST00000540756 A0A1B0GX12 115 aa22.52■■□□□ 1.2
TTC3-225ENST00000540756 H3BN98 237 aa22.52■■□□□ 1.2
TTC3-225ENST00000540756 MASP2O00187 686 aa22.52■■□□□ 1.2
TTC3-225ENST00000540756 TBXA2RP21731 343 aa22.52■■□□□ 1.2
TTC3-225ENST00000540756 CRHBPP24387 322 aa22.52■■□□□ 1.2
TTC3-225ENST00000540756 ST13P50502 369 aaKnown RBP22.52■■□□□ 1.2
TTC3-225ENST00000540756 PIGFQ07326 219 aa22.52■■□□□ 1.2
TTC3-225ENST00000540756 P3H2Q8IVL5 708 aa22.52■■□□□ 1.2
TTC3-225ENST00000540756 C17orf47Q8NEP4 570 aa22.52■■□□□ 1.2
TTC3-225ENST00000540756 BPIFB6Q8NFQ5 453 aa22.52■■□□□ 1.2
TTC3-225ENST00000540756 OR2Y1Q8NGV0 311 aa22.52■■□□□ 1.2
TTC3-225ENST00000540756 C20orf141Q9NUB4 165 aa22.52■■□□□ 1.2
TTC3-225ENST00000540756 C19orf25Q9UFG5 118 aaPredicted RBP22.52■■□□□ 1.2
TTC3-225ENST00000540756 MRTO4Q9UKD2 239 aaKnown RBP22.52■■□□□ 1.2
TTC3-225ENST00000540756 PADI1Q9ULC6 663 aa22.52■■□□□ 1.2
TTC3-225ENST00000540756 HS3ST3B1Q9Y662 390 aa22.52■■□□□ 1.2
TTC3-225ENST00000540756 CNOT1A5YKK6 2376 aaKnown RBP22.52■■□□□ 1.2
TTC3-225ENST00000540756 ASPMQ8IZT6 3477 aa22.52■■□□□ 1.2
TTC3-225ENST00000540756 ZAR1LA6NP61 321 aa22.52■■□□□ 1.19
TTC3-225ENST00000540756 KPNA4O00629 521 aaPredicted RBP22.52■■□□□ 1.19
TTC3-225ENST00000540756 GMFGO60234 142 aa22.52■■□□□ 1.19
TTC3-225ENST00000540756 WBP4O75554 376 aaKnown RBP22.52■■□□□ 1.19
TTC3-225ENST00000540756 ESRRGP62508 458 aa22.52■■□□□ 1.19
TTC3-225ENST00000540756 KIRREL2Q6UWL6 708 aa22.52■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms