RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 ADARB1P78563 741 aaKnown RBP13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 PLAURQ03405 335 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 PLCXD2Q0VAA5 305 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 ST3GAL3Q11203 375 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 TBC1D25Q3MII6 688 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 KLHL26Q53HC5 615 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 ENTPD8Q5MY95 495 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 PLEKHM3Q6ZWE6 761 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 LINC00471Q8N535 108 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 ZNF614Q8N883 585 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 OR4C3Q8NH37 302 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 OMA1Q96E52 524 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 TOR3AQ9H497 397 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 TCFL5Q9UL49 500 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 SLC35A3Q9Y2D2 325 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 HS3ST3B1Q9Y662 390 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 TRBV11-1A0A0K0K1C0 115 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 CDC14CA4D256 554 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 SERINC4A6NH21 518 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 CPSF4LA6NMK7 179 aaKnown RBP13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 SCDO00767 359 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 REM1O75628 298 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 ZFAND5O76080 213 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 TNFSF15O95150 251 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 UTS2O95399 124 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 ABCD3P28288 659 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 IL12BP29460 328 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 RPS6KA3P51812 740 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 NRG3P56975 720 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 EXT1Q16394 746 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 FGD3Q5JSP0 725 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 FAM69BQ5VUD6 431 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 TTC23Q5W5X9 447 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 ZNF770Q6IQ21 691 aaPredicted RBP13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 TMEM154Q6P9G4 183 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 UGT2A3Q6UWM9 527 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 ZNF550Q7Z398 422 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 NLGN4XQ8N0W4 816 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 SLC5A8Q8N695 610 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 TOR1AIP2Q8NFQ8 470 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 NLGN4YQ8NFZ3 816 aaPredicted RBP13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 SLC7A13Q8TCU3 470 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 ELP5Q8TE02 316 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 ADAMTS16Q8TE57 1224 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 MBOAT4Q96T53 435 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 FEVQ99581 238 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 YTHDF1Q9BYJ9 559 aaKnown RBP13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 KRT84Q9NSB2 600 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 MAN2C1Q9NTJ4 1040 aa13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 DNAJB12Q9NXW2 375 aaKnown RBP13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 FARSAQ9Y285 508 aaKnown RBP13.1□□□□□ -0.31
CYB561A3-216ENST00000540755 SH3PXD2BA1X283 911 aa13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 C21orf140B9A014 251 aa13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 ABCB7O75027 752 aa13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 BCAS1O75363 584 aaPredicted RBP13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 CYP7B1O75881 506 aa13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 NGFRP08138 427 aa13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 ITGAMP11215 1152 aa13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 CYP4B1P13584 511 aa13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 TBXA2RP21731 343 aa13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 CBLP22681 906 aa13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 MYF6P23409 242 aa13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 RPS15P62841 145 aaKnown RBP13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 HOXC5Q00444 222 aa13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 TLE3Q04726 772 aa13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 SSPNQ14714 243 aa13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 TRAM2Q15035 370 aa13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 ZIK1Q3SY52 487 aaPredicted RBP13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 FNDC7Q5VTL7 733 aa13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 USP51Q70EK9 711 aa13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 PRR22Q8IZ63 422 aa13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 ZNF555Q8NEP9 628 aa13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 OR9Q2Q8NGE9 314 aa13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 CYGBQ8WWM9 190 aa13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 CNOT9Q92600 299 aaKnown RBP13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 FGF11Q92914 225 aa13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 SLC38A4Q969I6 547 aa13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 NACC2Q96BF6 587 aa13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 IMMP1LQ96LU5 166 aa13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 CNBD2Q96M20 576 aa13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 ADOQ96SZ5 270 aa13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 ZNF559Q9BR84 538 aa13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 GPR87Q9BY21 358 aa13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 ZNF696Q9H7X3 374 aa13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 FAM118AQ9NWS6 357 aa13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 POFUT2Q9Y2G5 429 aa13.09□□□□□ -0.31
CYB561A3-216ENST00000540755 A0A1W2PQD3 144 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 A6NHS1 94 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 OR6C70A6NIJ9 312 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 TMEM200CA6NKL6 621 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 SOCS6O14544 535 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 SLC16A6O15403 523 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 MITFO75030 526 aaPredicted RBP13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 ICOSLGO75144 302 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 DXOO77932 396 aaKnown RBP13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 ADAP00813 363 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 CSTAP01040 98 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 GKN3PP0CG01 181 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 HPGDP15428 266 aa13.08□□□□□ -0.32
CYB561A3-216ENST00000540755 NAGAP17050 411 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms