RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 COX18Q8N8Q8 333 aa9.72□□□□□ -0.85
ATL3-204ENST00000540699 OR4D11Q8NGI4 311 aa9.72□□□□□ -0.85
ATL3-204ENST00000540699 OR2T29Q8NH02 315 aa9.72□□□□□ -0.85
ATL3-204ENST00000540699 SLC22A8Q8TCC7 542 aa9.72□□□□□ -0.85
ATL3-204ENST00000540699 SPPL2AQ8TCT8 520 aa9.72□□□□□ -0.85
ATL3-204ENST00000540699 DNAJC9Q8WXX5 260 aa9.72□□□□□ -0.85
ATL3-204ENST00000540699 PMM1Q92871 262 aa9.72□□□□□ -0.85
ATL3-204ENST00000540699 TMBIM1Q969X1 311 aa9.72□□□□□ -0.85
ATL3-204ENST00000540699 ZG16BQ96DA0 208 aa9.72□□□□□ -0.85
ATL3-204ENST00000540699 SCMH1Q96GD3 660 aa9.72□□□□□ -0.85
ATL3-204ENST00000540699 ZNF597Q96LX8 424 aa9.72□□□□□ -0.85
ATL3-204ENST00000540699 ZNF300Q96RE9 604 aaPredicted RBP9.72□□□□□ -0.85
ATL3-204ENST00000540699 SPATA5L1Q9BVQ7 753 aa9.72□□□□□ -0.85
ATL3-204ENST00000540699 PINK1Q9BXM7 581 aa9.72□□□□□ -0.85
ATL3-204ENST00000540699 AMBRA1Q9C0C7 1298 aa9.72□□□□□ -0.85
ATL3-204ENST00000540699 QRSL1Q9H0R6 528 aaKnown RBP9.72□□□□□ -0.85
ATL3-204ENST00000540699 LIN28AQ9H9Z2 209 aaKnown RBP9.72□□□□□ -0.85
ATL3-204ENST00000540699 C8orf4Q9NR00 106 aa9.72□□□□□ -0.85
ATL3-204ENST00000540699 SEC14L3Q9UDX4 400 aa9.72□□□□□ -0.85
ATL3-204ENST00000540699 WDR45Q9Y484 360 aa9.72□□□□□ -0.85
ATL3-204ENST00000540699 PCDHGA10Q9Y5H3 936 aa9.72□□□□□ -0.85
ATL3-204ENST00000540699 TRAV17A0A0B4J275 112 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 CENPVL1A0A0U1RR11 272 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 C7orf72A4D263 438 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 FRG2CA6NGY1 282 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 AGAP5A6NIR3 686 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 PDLIM1O00151 329 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 DLGAP1O14490 977 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 SEMA7AO75326 666 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 OR6B1O95007 311 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 DIRAS1O95057 198 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 LGI1O95970 557 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 IGKV1D-16P01601 117 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 FBXO45P0C2W1 286 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 ACADSP16219 412 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 NAGAP17050 411 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 PRKAR1BP31321 381 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 DCTP40126 519 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 SOX3P41225 446 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 OR1E2P47887 323 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 CYB561P49447 251 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 NR0B1P51843 470 aaKnown RBP9.71□□□□□ -0.86
ATL3-204ENST00000540699 IST1P53990 364 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 HPCAP84074 193 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 ZNF169Q14929 603 aaPredicted RBP9.71□□□□□ -0.86
ATL3-204ENST00000540699 OR1C1Q15619 314 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 ZNHIT3Q15649 155 aaPredicted RBP9.71□□□□□ -0.86
ATL3-204ENST00000540699 IGFBP7Q16270 282 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 PLEKHN1Q494U1 663 aaPredicted RBP9.71□□□□□ -0.86
ATL3-204ENST00000540699 ZBTB49Q6ZSB9 765 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 ZAR1Q86SH2 424 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 VRK2Q86Y07 508 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 LACC1Q8IV20 430 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 TAGAPQ8N103 731 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 SVOPLQ8N434 492 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 CBR4Q8N4T8 237 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 TEX19Q8NA77 164 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 OR4N2Q8NGD1 307 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 OR5K1Q8NHB7 308 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 GPR151Q8TDV0 419 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 ASB15Q8WXK1 588 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 HSPBAP1Q96EW2 488 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 LCORQ96JN0 433 aaPredicted RBP9.71□□□□□ -0.86
ATL3-204ENST00000540699 SGCZQ96LD1 299 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 DHRS1Q96LJ7 313 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 SIGLEC12Q96PQ1 595 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 GAL3ST4Q96RP7 486 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 ZNF347Q96SE7 839 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 ARHGDIGQ99819 225 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 WFDC6Q9BQY6 131 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 GABARAPL1Q9H0R8 117 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 NXF5Q9H1B4 397 aaKnown RBP9.71□□□□□ -0.86
ATL3-204ENST00000540699 MTHFD2LQ9H903 347 aaPredicted RBP9.71□□□□□ -0.86
ATL3-204ENST00000540699 SH2D2AQ9NP31 389 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 FBXO34Q9NWN3 711 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 LRFN1Q9P244 771 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 KCNE5Q9UJ90 142 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 MKLN1Q9UL63 735 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 ENPP4Q9Y6X5 453 aa9.71□□□□□ -0.86
ATL3-204ENST00000540699 CLEC18AA5D8T8 446 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 NPIPB9F8W1W9 429 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 EI24O14681 340 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 STX11O75558 287 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 F10P00742 488 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 IFNW1P05000 195 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 THBS1P07996 1170 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 SP1P08047 785 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 ZNF23P17027 643 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 RHCEP18577 417 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 ATP6V1C1P21283 382 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 FPR1P21462 350 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 ABCD3P28288 659 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 DNAJA1P31689 397 aaKnown RBP9.7□□□□□ -0.86
ATL3-204ENST00000540699 PIGAP37287 484 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 LIMS1P48059 325 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 EEF1A1P68104 462 aaKnown RBP9.7□□□□□ -0.86
ATL3-204ENST00000540699 PPP2R2BQ00005 443 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 PLAURQ03405 335 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 DAG1Q14118 895 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 NPTX1Q15818 432 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms