RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 BLOC1S1P78537 153 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 ZNF33AQ06730 810 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 SKP2Q13309 424 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 PEA15Q15121 130 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 CASP12Q6UXS9 341 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 ZNF621Q6ZSS3 439 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 RTL10Q7L3V2 364 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 REC114Q7Z4M0 266 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 RGL4Q8IZJ4 473 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 TTC16Q8NEE8 873 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 MRPS31Q92665 395 aaKnown RBP8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 SPACA7Q96KW9 195 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 ART5Q96L15 291 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 LRR1Q96L50 414 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 CMTM3Q96MX0 182 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 TSSK3Q96PN8 268 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 GPR21Q99679 349 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 OR10A4Q9H209 315 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 SLC38A1Q9H2H9 487 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 ACER3Q9NUN7 267 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 ASIC5Q9NY37 505 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 DLGAP4Q9Y2H0 992 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 HS3ST4Q9Y661 456 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 COL4A4P53420 1690 aaPredicted RBP8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 PLXNA3P51805 1871 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 EYSQ5T1H1 3165 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 A0A1B0GUH1 482 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 PRAMEF25A6NGN4 478 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 CD8B2A6NJW9 211 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 FPGTO14772 594 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 LINC01565O15544 149 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 MOSPD3O75425 235 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 LRATO95237 230 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 SOX14O95416 240 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 IGLV3-27P01718 113 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 KLKB1P03952 638 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 HNRNPA1P09651 372 aaKnown RBP eCLIP8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 OR8U8P0C7N1 319 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 PRSS56P0CW18 603 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 CD8BP10966 210 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 ABCD3P28288 659 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 NOS3P29474 1203 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 RAD52P43351 418 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 HTR5AP47898 357 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 RAB4BP61018 213 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 RAB2AP61019 212 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 AP1S1P61966 158 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 SELENOWP63302 87 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 TAP2Q03519 686 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 GTF2H2Q13888 395 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 GANABQ14697 944 aaKnown RBP8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 HEPACAMQ14CZ8 416 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 TCEAL5Q5H9L2 206 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 CRB2Q5IJ48 1285 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 SLC22A10Q63ZE4 541 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 SFRP4Q6FHJ7 346 aaPredicted RBP8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 MRNIPQ6NTE8 343 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 GTF2H2CQ6P1K8 395 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 CFAP206Q8IYR0 622 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 MEIOBQ8N635 442 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 POMGNT2Q8NAT1 580 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 MAL2Q969L2 176 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 CHFRQ96EP1 664 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 IFT27Q9BW83 186 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 SLC46A2Q9BY10 475 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 WNT5BQ9H1J7 359 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 TLNRD1Q9H1K6 362 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 ABCG8Q9H221 673 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 TMPRSS5Q9H3S3 457 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 IPPKQ9H8X2 491 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 NMNAT1Q9HAN9 279 aaPredicted RBP8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 ZNF69Q9UC07 566 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 ZNF629Q9UEG4 869 aaPredicted RBP8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 PISDQ9UG56 409 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 TESQ9UGI8 421 aaKnown RBP8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 CBLCQ9ULV8 474 aa8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 CARHSP1Q9Y2V2 147 aaKnown RBP8.85□□□□□ -0.99
CTNNA1-243ENST00000540387 DSPPQ9NZW4 1301 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 MYO16Q9Y6X6 1858 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 FAM227AF5H4B4 570 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 MATN3O15232 486 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 PPM1DO15297 605 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 BRINP1O60477 761 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 MAFKO60675 156 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 GCM2O75603 506 aaPredicted RBP8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 PEX11BO96011 259 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 OTCP00480 354 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 SRPRAP08240 638 aaKnown RBP8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 GAAP10253 952 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 IRF1P10914 325 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 ITGA3P26006 1051 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 RBP2P50120 134 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 RNF144AP50876 292 aaPredicted RBP8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 RING1Q06587 406 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 HYAL1Q12794 435 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 ATP13A5Q4VNC0 1218 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 C10orf91Q5T1B1 145 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 ARTNQ5T4W7 220 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 NCEH1Q6PIU2 408 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 CCDC116Q8IYX3 515 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms