RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 CHRNA6Q15825 494 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 GSG1LQ6UXU4 331 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 ZNF704Q6ZNC4 412 aaPredicted RBP8.14□□□□□ -1.11
DDB1-217ENST00000540166 MSANTD1Q6ZTZ1 278 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 ZFP82Q8N141 532 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 SVBPQ8N300 66 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 PFDN5Q99471 154 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 SLC35A5Q9BS91 424 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 MARK1Q9P0L2 795 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 MRTO4Q9UKD2 239 aaKnown RBP8.14□□□□□ -1.11
DDB1-217ENST00000540166 NEU3Q9UQ49 428 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 SLC27A6Q9Y2P4 619 aa8.14□□□□□ -1.11
DDB1-217ENST00000540166 KANTRA0A1W2PQU2 76 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 OR5K4A6NMS3 321 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 TXNL1O43396 289 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 NDUFA2O43678 99 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 PEX14O75381 377 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 KLKB1P03952 638 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 GPX2P18283 190 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 ELK1P19419 428 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 PTPN6P29350 595 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 HLA-FP30511 346 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 SLC6A1P30531 599 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 CDH11P55287 796 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 FRG2Q64ET8 278 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 ARL9Q6T311 187 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 C10orf111Q8N326 155 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 C1orf52Q8N6N3 182 aaKnown RBP8.13□□□□□ -1.11
DDB1-217ENST00000540166 OR10K1Q8NGX5 313 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 FRG2BQ96QU4 278 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 ACPTQ9BZG2 426 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 SHARPINQ9H0F6 387 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 FN3KQ9H479 309 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 OSGEPL1Q9H4B0 414 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 CCDC86Q9H6F5 360 aaKnown RBP8.13□□□□□ -1.11
DDB1-217ENST00000540166 B3GAT2Q9NPZ5 323 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 DLL4Q9NR61 685 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 IL36AQ9UHA7 158 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 OARD1Q9Y530 152 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 A0A1W2PQU0 124 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 METTL21EPA6NDL7 271 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 PRAMEF2O60811 474 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 PRAF2O60831 178 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 MPC2O95563 127 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 HBQ1P09105 142 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 LAMP1P11279 417 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 PPP3CBP16298 524 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 GKP32189 559 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 MTNR1AP48039 350 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 KCNJ10P78508 379 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 BLOC1S1P78537 153 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 RGNQ15493 299 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 HIST2H2AA3Q6FI13 130 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 PGBD2Q6P3X8 592 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 MTFR2Q6P444 385 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 SBSNQ6UWP8 590 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 SLC30A8Q8IWU4 369 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 TBC1D19Q8N5T2 526 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 SUMF1Q8NBK3 374 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 OR5AK3PQ8NH89 298 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 LMX1AQ8TE12 382 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 APIPQ96GX9 242 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 QRSL1Q9H0R6 528 aaKnown RBP8.13□□□□□ -1.11
DDB1-217ENST00000540166 ZFP64Q9NPA5 681 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 VPS29Q9UBQ0 182 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 RPS6KB2Q9UBS0 482 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 SEC14L3Q9UDX4 400 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 MEIKINA0A087WXM9 373 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 RPS10-NUDT3A0A1W2PQS6 291 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 DRGXA6NNA5 263 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 METTL12A8MUP2 240 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 RNGTTO60942 597 aaKnown RBP8.13□□□□□ -1.11
DDB1-217ENST00000540166 ZDHHC11BP0C7U3 371 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 THEGLP0DJG4 465 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 AHCYP23526 432 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 PBLDP30039 288 aaPredicted RBP8.13□□□□□ -1.11
DDB1-217ENST00000540166 PCGF2P35227 344 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 CAPZA1P52907 286 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 HNRNPKP61978 463 aaKnown RBP eCLIP8.13□□□□□ -1.11
DDB1-217ENST00000540166 TAP2Q03519 686 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 SLC14A1Q13336 389 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 C3orf38Q5JPI3 329 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 TMEM164Q5U3C3 297 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 PRAMEF13Q5VWM6 474 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 LIN54Q6MZP7 749 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 TMEM107Q6UX40 140 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 TAF8Q7Z7C8 310 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 KIAA0907Q7Z7F0 614 aaPredicted RBP8.13□□□□□ -1.11
DDB1-217ENST00000540166 SIAH3Q8IW03 269 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 OR2I1PQ8NGU4 316 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 RNASE11Q8TAA1 199 aaKnown RBP8.13□□□□□ -1.11
DDB1-217ENST00000540166 TRMT10AQ8TBZ6 339 aaKnown RBP8.13□□□□□ -1.11
DDB1-217ENST00000540166 CHTF18Q8WVB6 975 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 YIPF5Q969M3 257 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 PPCDCQ96CD2 204 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 MNTQ99583 582 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 WDR26Q9H7D7 661 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 TRPC4Q9UBN4 977 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 SLC6A5Q9Y345 797 aa8.13□□□□□ -1.11
DDB1-217ENST00000540166 ZNF318Q5VUA4 2279 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms