RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 RDH8Q9NYR8 311 aa12.97□□□□□ -0.33
SCNN1A-215ENST00000540037 MEIKINA0A087WXM9 373 aa12.96□□□□□ -0.33
SCNN1A-215ENST00000540037 A0A0G2JPF8 293 aa12.96□□□□□ -0.33
SCNN1A-215ENST00000540037 A0A1W2PPV9 198 aa12.96□□□□□ -0.33
SCNN1A-215ENST00000540037 PRR23AA6NEV1 266 aa12.96□□□□□ -0.33
SCNN1A-215ENST00000540037 ANTXRLA6NF34 631 aa12.96□□□□□ -0.33
SCNN1A-215ENST00000540037 HNRNPCL2B2RXH8 293 aa12.96□□□□□ -0.33
SCNN1A-215ENST00000540037 HNRNPCL3B7ZW38 293 aa12.96□□□□□ -0.33
SCNN1A-215ENST00000540037 CASC3O15234 703 aaKnown RBP12.96□□□□□ -0.33
SCNN1A-215ENST00000540037 KLF4O43474 513 aa12.96□□□□□ -0.33
SCNN1A-215ENST00000540037 HNRNPCL4P0DMR1 293 aa12.96□□□□□ -0.33
SCNN1A-215ENST00000540037 RRASP10301 218 aa12.96□□□□□ -0.33
SCNN1A-215ENST00000540037 DRD2P14416 443 aa12.96□□□□□ -0.33
SCNN1A-215ENST00000540037 NDUFV2P19404 249 aa12.96□□□□□ -0.33
SCNN1A-215ENST00000540037 TGM3Q08188 693 aa12.96□□□□□ -0.33
SCNN1A-215ENST00000540037 CLLU1Q5K131 121 aa12.96□□□□□ -0.33
SCNN1A-215ENST00000540037 PYHIN1Q6K0P9 492 aa12.96□□□□□ -0.33
SCNN1A-215ENST00000540037 DGLUCYQ7Z3D6 616 aa12.96□□□□□ -0.33
SCNN1A-215ENST00000540037 OR5J2Q8NH18 312 aa12.96□□□□□ -0.33
SCNN1A-215ENST00000540037 ACOT11Q8WXI4 607 aaPredicted RBP12.96□□□□□ -0.33
SCNN1A-215ENST00000540037 KISS1RQ969F8 398 aaPredicted RBP12.96□□□□□ -0.33
SCNN1A-215ENST00000540037 NUS1Q96E22 293 aa12.96□□□□□ -0.33
SCNN1A-215ENST00000540037 PPP1R16AQ96I34 528 aa12.96□□□□□ -0.33
SCNN1A-215ENST00000540037 ZSWIM3Q96MP5 696 aa12.96□□□□□ -0.33
SCNN1A-215ENST00000540037 ARHGDIGQ99819 225 aa12.96□□□□□ -0.33
SCNN1A-215ENST00000540037 MS4A7Q9GZW8 240 aaPredicted RBP12.96□□□□□ -0.33
SCNN1A-215ENST00000540037 SPRTNQ9H040 489 aaPredicted RBP12.96□□□□□ -0.33
SCNN1A-215ENST00000540037 SYNPO2LQ9H987 977 aa12.96□□□□□ -0.33
SCNN1A-215ENST00000540037 C12orf10Q9HB07 376 aa12.96□□□□□ -0.33
SCNN1A-215ENST00000540037 TSPAN11A1L157 253 aa12.96□□□□□ -0.34
SCNN1A-215ENST00000540037 IFNA7P01567 189 aa12.96□□□□□ -0.34
SCNN1A-215ENST00000540037 LRG1P02750 347 aa12.96□□□□□ -0.34
SCNN1A-215ENST00000540037 C6P13671 934 aa12.96□□□□□ -0.34
SCNN1A-215ENST00000540037 PRG2P13727 222 aa12.96□□□□□ -0.34
SCNN1A-215ENST00000540037 IL9P15248 144 aa12.96□□□□□ -0.34
SCNN1A-215ENST00000540037 POU3F2P20265 443 aaPredicted RBP12.96□□□□□ -0.34
SCNN1A-215ENST00000540037 GPR162Q16538 588 aa12.96□□□□□ -0.34
SCNN1A-215ENST00000540037 WDR88Q6ZMY6 472 aa12.96□□□□□ -0.34
SCNN1A-215ENST00000540037 SLC39A11Q8N1S5 342 aa12.96□□□□□ -0.34
SCNN1A-215ENST00000540037 PTP4A1Q93096 173 aa12.96□□□□□ -0.34
SCNN1A-215ENST00000540037 LINC00052Q96N35 136 aa12.96□□□□□ -0.34
SCNN1A-215ENST00000540037 OR52D1Q9H346 318 aa12.96□□□□□ -0.34
SCNN1A-215ENST00000540037 EPHX3Q9H6B9 360 aa12.96□□□□□ -0.34
SCNN1A-215ENST00000540037 SPHK2Q9NRA0 654 aa12.96□□□□□ -0.34
SCNN1A-215ENST00000540037 MRPL39Q9NYK5 338 aaKnown RBP12.96□□□□□ -0.34
SCNN1A-215ENST00000540037 PRKAG2Q9UGJ0 569 aa12.96□□□□□ -0.34
SCNN1A-215ENST00000540037 SNRNP200O75643 2136 aaKnown RBP12.96□□□□□ -0.34
SCNN1A-215ENST00000540037 POM121CA8CG34 1229 aa12.95□□□□□ -0.34
SCNN1A-215ENST00000540037 NTSP30990 170 aa12.95□□□□□ -0.34
SCNN1A-215ENST00000540037 BMP8BP34820 402 aa12.95□□□□□ -0.34
SCNN1A-215ENST00000540037 STAT5AP42229 794 aa12.95□□□□□ -0.34
SCNN1A-215ENST00000540037 ACSM3Q53FZ2 586 aa12.95□□□□□ -0.34
SCNN1A-215ENST00000540037 LHX8Q68G74 356 aa12.95□□□□□ -0.34
SCNN1A-215ENST00000540037 FAAP20Q6NZ36 180 aa12.95□□□□□ -0.34
SCNN1A-215ENST00000540037 GET4Q7L5D6 327 aaPredicted RBP12.95□□□□□ -0.34
SCNN1A-215ENST00000540037 BMP8AQ7Z5Y6 402 aa12.95□□□□□ -0.34
SCNN1A-215ENST00000540037 ZBTB44Q8NCP5 570 aa12.95□□□□□ -0.34
SCNN1A-215ENST00000540037 ADAMTS14Q8WXS8 1223 aa12.95□□□□□ -0.34
SCNN1A-215ENST00000540037 HGDQ93099 445 aa12.95□□□□□ -0.34
SCNN1A-215ENST00000540037 MENTQ9BUN1 341 aa12.95□□□□□ -0.34
SCNN1A-215ENST00000540037 LGR4Q9BXB1 951 aa12.95□□□□□ -0.34
SCNN1A-215ENST00000540037 BRD7Q9NPI1 651 aa12.95□□□□□ -0.34
SCNN1A-215ENST00000540037 TRIM36Q9NQ86 728 aa12.95□□□□□ -0.34
SCNN1A-215ENST00000540037 A0A1W2PPL8 197 aa12.95□□□□□ -0.34
SCNN1A-215ENST00000540037 LRIT2A6NDA9 550 aa12.95□□□□□ -0.34
SCNN1A-215ENST00000540037 TRABD2BA6NFA1 517 aa12.95□□□□□ -0.34
SCNN1A-215ENST00000540037 NUPL2O15504 423 aaKnown RBP12.95□□□□□ -0.34
SCNN1A-215ENST00000540037 GATBO75879 557 aaKnown RBP12.95□□□□□ -0.34
SCNN1A-215ENST00000540037 GKN3PP0CG01 181 aa12.95□□□□□ -0.34
SCNN1A-215ENST00000540037 PTHLHP12272 177 aa12.95□□□□□ -0.34
SCNN1A-215ENST00000540037 MAKP20794 623 aa12.95□□□□□ -0.34
SCNN1A-215ENST00000540037 SNRPNP63162 240 aaKnown RBP12.95□□□□□ -0.34
SCNN1A-215ENST00000540037 CSNK1G2P78368 415 aa12.95□□□□□ -0.34
SCNN1A-215ENST00000540037 REEP5Q00765 189 aa12.95□□□□□ -0.34
SCNN1A-215ENST00000540037 BTN1A1Q13410 526 aa12.95□□□□□ -0.34
SCNN1A-215ENST00000540037 GNA13Q14344 377 aa12.95□□□□□ -0.34
SCNN1A-215ENST00000540037 THSD4Q6ZMP0 1018 aa12.95□□□□□ -0.34
SCNN1A-215ENST00000540037 DCUN1D3Q8IWE4 304 aa12.95□□□□□ -0.34
SCNN1A-215ENST00000540037 DPEP2Q9H4A9 486 aa12.95□□□□□ -0.34
SCNN1A-215ENST00000540037 DOCK9Q9BZ29 2069 aa12.95□□□□□ -0.34
SCNN1A-215ENST00000540037 ERI3O43414 337 aaKnown RBP12.94□□□□□ -0.34
SCNN1A-215ENST00000540037 PYCR1P32322 319 aa12.94□□□□□ -0.34
SCNN1A-215ENST00000540037 SNTB2Q13425 540 aaKnown RBP12.94□□□□□ -0.34
SCNN1A-215ENST00000540037 CAMK1Q14012 370 aa12.94□□□□□ -0.34
SCNN1A-215ENST00000540037 CCNJQ5T5M9 372 aa12.94□□□□□ -0.34
SCNN1A-215ENST00000540037 CDC73Q6P1J9 531 aa12.94□□□□□ -0.34
SCNN1A-215ENST00000540037 MBOAT2Q6ZWT7 520 aa12.94□□□□□ -0.34
SCNN1A-215ENST00000540037 MEPCEQ7L2J0 689 aaKnown RBP12.94□□□□□ -0.34
SCNN1A-215ENST00000540037 PRSS42Q7Z5A4 293 aa12.94□□□□□ -0.34
SCNN1A-215ENST00000540037 ARL14Q8N4G2 192 aa12.94□□□□□ -0.34
SCNN1A-215ENST00000540037 SLC16A11Q8NCK7 471 aa12.94□□□□□ -0.34
SCNN1A-215ENST00000540037 GHSRQ92847 366 aa12.94□□□□□ -0.34
SCNN1A-215ENST00000540037 RBPMSQ93062 196 aaKnown RBP12.94□□□□□ -0.34
SCNN1A-215ENST00000540037 PEX11GQ96HA9 241 aa12.94□□□□□ -0.34
SCNN1A-215ENST00000540037 AHCYL2Q96HN2 611 aaKnown RBP12.94□□□□□ -0.34
SCNN1A-215ENST00000540037 PGLYRP3Q96LB9 341 aa12.94□□□□□ -0.34
SCNN1A-215ENST00000540037 CAMK1GQ96NX5 476 aa12.94□□□□□ -0.34
SCNN1A-215ENST00000540037 OR10A4Q9H209 315 aa12.94□□□□□ -0.34
SCNN1A-215ENST00000540037 WSB2Q9NYS7 404 aaPredicted RBP12.94□□□□□ -0.34
SCNN1A-215ENST00000540037 CXXC1Q9P0U4 656 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms