RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 REEP3Q6NUK4 255 aa11.54□□□□□ -0.56
TSPAN9-207ENST00000539631 C8orf82Q6P1X6 216 aaPredicted RBP11.54□□□□□ -0.56
TSPAN9-207ENST00000539631 ARHGAP11AQ6P4F7 1023 aa11.54□□□□□ -0.56
TSPAN9-207ENST00000539631 ARSKQ6UWY0 536 aa11.54□□□□□ -0.56
TSPAN9-207ENST00000539631 HACD2Q6Y1H2 254 aa11.54□□□□□ -0.56
TSPAN9-207ENST00000539631 SERPINA11Q86U17 422 aa11.54□□□□□ -0.56
TSPAN9-207ENST00000539631 CALHM3Q86XJ0 350 aa11.54□□□□□ -0.56
TSPAN9-207ENST00000539631 PEX5LQ8IYB4 626 aa11.54□□□□□ -0.56
TSPAN9-207ENST00000539631 TMCO5AQ8N6Q1 288 aa11.54□□□□□ -0.56
TSPAN9-207ENST00000539631 METTL25Q8N6Q8 603 aa11.54□□□□□ -0.56
TSPAN9-207ENST00000539631 NEIL3Q8TAT5 605 aa11.54□□□□□ -0.56
TSPAN9-207ENST00000539631 OIT3Q8WWZ8 545 aa11.54□□□□□ -0.56
TSPAN9-207ENST00000539631 PMM1Q92871 262 aa11.54□□□□□ -0.56
TSPAN9-207ENST00000539631 ARSGQ96EG1 525 aa11.54□□□□□ -0.56
TSPAN9-207ENST00000539631 C1GALT1C1Q96EU7 318 aa11.54□□□□□ -0.56
TSPAN9-207ENST00000539631 ECSITQ9BQ95 431 aa11.54□□□□□ -0.56
TSPAN9-207ENST00000539631 HHATLQ9HCP6 504 aa11.54□□□□□ -0.56
TSPAN9-207ENST00000539631 CMTM6Q9NX76 183 aa11.54□□□□□ -0.56
TSPAN9-207ENST00000539631 TAS2R10Q9NYW0 307 aa11.54□□□□□ -0.56
TSPAN9-207ENST00000539631 USP22Q9UPT9 525 aa11.54□□□□□ -0.56
TSPAN9-207ENST00000539631 OSGIN2Q9Y236 505 aa11.54□□□□□ -0.56
TSPAN9-207ENST00000539631 RPH3AQ9Y2J0 694 aaPredicted RBP11.54□□□□□ -0.56
TSPAN9-207ENST00000539631 ZNF835Q9Y2P0 537 aa11.54□□□□□ -0.56
TSPAN9-207ENST00000539631 MRPS18CQ9Y3D5 142 aaKnown RBP11.54□□□□□ -0.56
TSPAN9-207ENST00000539631 GTF3C1Q12789 2109 aa11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 C15orf38-AP3S2A0A0A6YYH1 394 aa11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 CCT8L1PA6NM43 557 aa11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 SHISA8B8ZZ34 492 aa11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 NPIPA2E9PIF3 369 aa11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 NPIPA3F8WFD2 350 aa11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 EIF4E2O60573 245 aaKnown RBP11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 UBTFL6P0CB48 400 aaPredicted RBP11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 ABOP16442 354 aa11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 IL7RP16871 459 aa11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 PTGS2P35354 604 aa11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 RBBP4Q09028 425 aa11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 SKP2Q13309 424 aa11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 GANABQ14697 944 aaKnown RBP11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 KRT72Q14CN4 511 aa11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 ZNF836Q6ZNA1 936 aa11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 EIF3MQ7L2H7 374 aaKnown RBP11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 IFNEQ86WN2 208 aa11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 C11orf65Q8NCR3 313 aa11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 HIPK4Q8NE63 616 aa11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 FAM71CQ8NEG0 241 aa11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 OR5M1Q8NGP8 315 aa11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 PRR7Q8TB68 274 aa11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 CNOT9Q92600 299 aaKnown RBP11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 DTNBP1Q96EV8 351 aa11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 ZNF583Q96ND8 569 aa11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 NPAS1Q99742 590 aa11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 HOPXQ9BPY8 73 aaPredicted RBP11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 LAT2Q9GZY6 243 aa11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 GMPR2Q9P2T1 348 aaKnown RBP11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 ICAM5Q9UMF0 924 aa11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 ANGPT4Q9Y264 503 aa11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 VDAC3Q9Y277 283 aa11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 ZNF443Q9Y2A4 671 aaPredicted RBP11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 SLC35A3Q9Y2D2 325 aa11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 CFAP46Q8IYW2 2715 aa11.53□□□□□ -0.56
TSPAN9-207ENST00000539631 ZNF407Q9C0G0 2248 aa11.52□□□□□ -0.56
TSPAN9-207ENST00000539631 SLC19A2O60779 497 aa11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 GCM2O75603 506 aaPredicted RBP11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 WISP1O95388 367 aa11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 NUDT14O95848 222 aa11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 TPOP07202 933 aa11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 THBS1P07996 1170 aa11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 PABPC4LP0CB38 370 aaKnown RBP11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 NID1P14543 1247 aa11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 ETS2P15036 469 aa11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 BMP7P18075 431 aa11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 AQP1P29972 269 aa11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 PCGF2P35227 344 aa11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 CCR4P51679 360 aa11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 SLC7A2P52569 658 aa11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 SUMO3P55854 103 aaPredicted RBP11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 B3GALT5-AS1P59052 145 aa11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 PSME3P61289 254 aa11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 EEF1A1P68104 462 aaKnown RBP11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 CRYZQ08257 329 aaKnown RBP11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 TOMM34Q15785 309 aaPredicted RBP11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 C3AR1Q16581 482 aa11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 VMACQ2NL98 169 aa11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 PLPPR5Q32ZL2 321 aa11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 LIN52Q52LA3 116 aa11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 ZNF311Q5JNZ3 666 aa11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 DCST1Q5T197 706 aa11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 MRPL2Q5T653 305 aaKnown RBP11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 RAET1LQ5VY80 246 aa11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 Q6ZPB1 254 aaPredicted RBP11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 ARPINQ7Z6K5 226 aa11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 SLC15A3Q8IY34 581 aa11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 TOR1AIP2Q8NFQ8 470 aa11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 OR5W2Q8NH69 310 aa11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 FBXO27Q8NI29 283 aa11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 FAM57AQ8TBR7 257 aa11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 GPR119Q8TDV5 335 aa11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 ABTB1Q969K4 478 aaPredicted RBP11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 ZNF524Q96C55 264 aa11.52□□□□□ -0.57
TSPAN9-207ENST00000539631 SFXN2Q96NB2 322 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms