RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 GDPD4Q6W3E5 623 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 USP43Q70EL4 1123 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 LPCAT2Q7L5N7 544 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 NR2C2APQ86WQ0 139 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 RALGPS2Q86X27 583 aaPredicted RBP0.84□□□□□ -2.27
HIF1A-204ENST00000539097 TBC1D10CQ8IV04 446 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 NOXO1Q8NFA2 376 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 NUP37Q8NFH4 326 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 OR56B2PQ8NGI1 322 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 OR4C15Q8NGM1 316 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 NANPQ8TBE9 248 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 C11orf24Q96F05 449 aaPredicted RBP0.84□□□□□ -2.27
HIF1A-204ENST00000539097 MED30Q96HR3 178 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 NSL1Q96IY1 281 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 VPS35Q96QK1 796 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 TTYH2Q9BSA4 534 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 TMEM175Q9BSA9 504 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 CABLES2Q9BTV7 478 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 ZSCAN5AQ9BUG6 496 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 RPP25Q9BUL9 199 aaKnown RBP0.84□□□□□ -2.27
HIF1A-204ENST00000539097 SLC26A1Q9H2B4 701 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 WDR55Q9H6Y2 383 aaPredicted RBP0.84□□□□□ -2.27
HIF1A-204ENST00000539097 DCTPP1Q9H773 170 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 AUNIPQ9H7T9 357 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 CENPMQ9NSP4 180 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 B3GNT2Q9NY97 397 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 HACD3Q9P035 362 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 FOXJ3Q9UPW0 622 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 AURKCQ9UQB9 309 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 NAALAD2Q9Y3Q0 740 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 PPIAL4AQ9Y536 164 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 MMP24Q9Y5R2 645 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 MADDQ8WXG6 1647 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 PKD1L2Q7Z442 2459 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 STK36Q9NRP7 1315 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF142P52746 1687 aaPredicted RBP0.84□□□□□ -2.27
HIF1A-204ENST00000539097 RAI1Q7Z5J4 1906 aaPredicted RBP0.84□□□□□ -2.27
HIF1A-204ENST00000539097 COL16A1Q07092 1604 aaPredicted RBP0.84□□□□□ -2.27
HIF1A-204ENST00000539097 CAMSAP1Q5T5Y3 1602 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 USP32Q8NFA0 1604 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 ESYT2A0FGR8 921 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 EPM2AB3EWF7 344 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 F8VZ95 297 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 K7EQG2 157 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 EI24O14681 340 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 HCN1O60741 890 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 UFL1O94874 794 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 SYNGR4O95473 234 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 KRT75O95678 551 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 WNT2P09544 360 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 ADORA3P0DMS8 318 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 RRASP10301 218 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 HSPA5P11021 654 aaKnown RBP0.84□□□□□ -2.27
HIF1A-204ENST00000539097 TSPAN8P19075 237 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 CD1CP29017 333 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 IL2RGP31785 369 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 CYLC1P35663 651 aaPredicted RBP0.84□□□□□ -2.27
HIF1A-204ENST00000539097 BTDP43251 543 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 WNT4P56705 351 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 RPS4XP62701 263 aaKnown RBP0.84□□□□□ -2.27
HIF1A-204ENST00000539097 GABPB1Q06547 395 aaPredicted RBP0.84□□□□□ -2.27
HIF1A-204ENST00000539097 NFATC2Q13469 925 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 CRMP1Q14194 572 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 TMEM187Q14656 261 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 ARHGAP19Q14CB8 494 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 KIAA0040Q15053 153 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 FAM189A2Q15884 450 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 MAPK6Q16659 721 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 NDUFA9Q16795 377 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 ADPRMQ3LIE5 342 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 HSP90AB3PQ58FF7 597 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 FAM120AOSQ5T036 256 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 CCDC183Q5T5S1 534 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 WSCD1Q658N2 575 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 C6orf89Q6UWU4 347 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 ASCL4Q6XD76 172 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 SLC25A48Q6ZT89 311 aaKnown RBP0.84□□□□□ -2.27
HIF1A-204ENST00000539097 LRRTM1Q86UE6 522 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 GPBP1Q86WP2 473 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 KRTAP7-1Q8IUC3 87 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 STKLD1Q8NE28 680 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 OR13A1Q8NGR1 328 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 RAB3IL1Q8TBN0 382 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 MIPOL1Q8TD10 442 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 HTR3CQ8WXA8 447 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 NODALQ96S42 347 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 MCHR1Q99705 422 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 FUNDC2Q9BWH2 189 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 LIME1Q9H400 295 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 EXO5Q9H790 373 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 YY1AP1Q9H869 796 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 EXD2Q9NVH0 621 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 RBM28Q9NW13 759 aaKnown RBP0.84□□□□□ -2.27
HIF1A-204ENST00000539097 NMRK1Q9NWW6 199 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 CLEC5AQ9NY25 188 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 MDFICQ9P1T7 246 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 RCOR3Q9P2K3 495 aaPredicted RBP0.84□□□□□ -2.27
HIF1A-204ENST00000539097 RABL2AQ9UBK7 228 aaPredicted RBP0.84□□□□□ -2.27
HIF1A-204ENST00000539097 GHRLQ9UBU3 117 aa0.84□□□□□ -2.27
HIF1A-204ENST00000539097 MIOXQ9UGB7 285 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms