RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 TRIM64BA6NI03 449 aa11.17□□□□□ -0.62
VAMP1-206ENST00000538970 PIP5K1BO14986 540 aa11.17□□□□□ -0.62
VAMP1-206ENST00000538970 SCAMP2O15127 329 aaKnown RBP11.17□□□□□ -0.62
VAMP1-206ENST00000538970 HMGN2P05204 90 aaKnown RBP11.17□□□□□ -0.62
VAMP1-206ENST00000538970 TUBBP07437 444 aa11.17□□□□□ -0.62
VAMP1-206ENST00000538970 NID1P14543 1247 aa11.17□□□□□ -0.62
VAMP1-206ENST00000538970 ME2P23368 584 aa11.17□□□□□ -0.62
VAMP1-206ENST00000538970 ELK4P28324 431 aa11.17□□□□□ -0.62
VAMP1-206ENST00000538970 SHC1P29353 583 aa11.17□□□□□ -0.62
VAMP1-206ENST00000538970 HPCAL1P37235 193 aa11.17□□□□□ -0.62
VAMP1-206ENST00000538970 NR1H2P55055 460 aa11.17□□□□□ -0.62
VAMP1-206ENST00000538970 ZNF117Q03924 483 aa11.17□□□□□ -0.62
VAMP1-206ENST00000538970 FOXF1Q12946 379 aa11.17□□□□□ -0.62
VAMP1-206ENST00000538970 LASP1Q14847 261 aaKnown RBP11.17□□□□□ -0.62
VAMP1-206ENST00000538970 ZNF239Q16600 458 aaKnown RBP11.17□□□□□ -0.62
VAMP1-206ENST00000538970 UGT3A2Q3SY77 523 aa11.17□□□□□ -0.62
VAMP1-206ENST00000538970 LRIG3Q6UXM1 1119 aa11.17□□□□□ -0.62
VAMP1-206ENST00000538970 PLEKHM3Q6ZWE6 761 aa11.17□□□□□ -0.62
VAMP1-206ENST00000538970 R3HCC1LQ7Z5L2 792 aaKnown RBP11.17□□□□□ -0.62
VAMP1-206ENST00000538970 HOMEZQ8IX15 550 aa11.17□□□□□ -0.62
VAMP1-206ENST00000538970 DDIASQ8IXT1 998 aa11.17□□□□□ -0.62
VAMP1-206ENST00000538970 LILRA2Q8N149 483 aa11.17□□□□□ -0.62
VAMP1-206ENST00000538970 RNF128Q8TEB7 428 aa11.17□□□□□ -0.62
VAMP1-206ENST00000538970 CDS1Q92903 461 aa11.17□□□□□ -0.62
VAMP1-206ENST00000538970 APOPT1Q96IL0 206 aa11.17□□□□□ -0.62
VAMP1-206ENST00000538970 STACQ99469 402 aa11.17□□□□□ -0.62
VAMP1-206ENST00000538970 BTBD2Q9BX70 525 aa11.17□□□□□ -0.62
VAMP1-206ENST00000538970 ACTR6Q9GZN1 396 aa11.17□□□□□ -0.62
VAMP1-206ENST00000538970 OR10A4Q9H209 315 aa11.17□□□□□ -0.62
VAMP1-206ENST00000538970 PIGUQ9H490 435 aa11.17□□□□□ -0.62
VAMP1-206ENST00000538970 FANCFQ9NPI8 374 aa11.17□□□□□ -0.62
VAMP1-206ENST00000538970 GIN1Q9NXP7 522 aa11.17□□□□□ -0.62
VAMP1-206ENST00000538970 GIMAP2Q9UG22 337 aa11.17□□□□□ -0.62
VAMP1-206ENST00000538970 PCNX3Q9H6A9 2034 aa11.16□□□□□ -0.62
VAMP1-206ENST00000538970 TMEM114B3SHH9 223 aa11.16□□□□□ -0.62
VAMP1-206ENST00000538970 SMAD7O15105 426 aaKnown RBP11.16□□□□□ -0.62
VAMP1-206ENST00000538970 OIP5O43482 229 aa11.16□□□□□ -0.62
VAMP1-206ENST00000538970 NPHS1O60500 1241 aa11.16□□□□□ -0.62
VAMP1-206ENST00000538970 PLAUP00749 431 aa11.16□□□□□ -0.62
VAMP1-206ENST00000538970 FGF4P08620 206 aa11.16□□□□□ -0.62
VAMP1-206ENST00000538970 LAMP1P11279 417 aa11.16□□□□□ -0.62
VAMP1-206ENST00000538970 PAX1P15863 534 aa11.16□□□□□ -0.62
VAMP1-206ENST00000538970 DDX5P17844 614 aaKnown RBP11.16□□□□□ -0.62
VAMP1-206ENST00000538970 PSMB1P20618 241 aaKnown RBP11.16□□□□□ -0.62
VAMP1-206ENST00000538970 RPL3P39023 403 aaKnown RBP11.16□□□□□ -0.62
VAMP1-206ENST00000538970 EIF1P41567 113 aaKnown RBP11.16□□□□□ -0.62
VAMP1-206ENST00000538970 ZNF844Q08AG5 666 aa11.16□□□□□ -0.62
VAMP1-206ENST00000538970 PTGR1Q14914 329 aa11.16□□□□□ -0.62
VAMP1-206ENST00000538970 XKR7Q5GH72 579 aa11.16□□□□□ -0.62
VAMP1-206ENST00000538970 ARL13AQ5H913 290 aaPredicted RBP11.16□□□□□ -0.62
VAMP1-206ENST00000538970 PDSS1Q5T2R2 415 aa11.16□□□□□ -0.62
VAMP1-206ENST00000538970 CDC73Q6P1J9 531 aa11.16□□□□□ -0.62
VAMP1-206ENST00000538970 CBLN3Q6UW01 205 aa11.16□□□□□ -0.62
VAMP1-206ENST00000538970 MTERF4Q7Z6M4 381 aaKnown RBP11.16□□□□□ -0.62
VAMP1-206ENST00000538970 STK32CQ86UX6 486 aa11.16□□□□□ -0.62
VAMP1-206ENST00000538970 WFDC8Q8IUA0 241 aa11.16□□□□□ -0.62
VAMP1-206ENST00000538970 OR7A2PQ8NGA2 310 aa11.16□□□□□ -0.62
VAMP1-206ENST00000538970 PSMA8Q8TAA3 256 aa11.16□□□□□ -0.62
VAMP1-206ENST00000538970 ABHD3Q8WU67 409 aa11.16□□□□□ -0.62
VAMP1-206ENST00000538970 OSTF1Q92882 214 aa11.16□□□□□ -0.62
VAMP1-206ENST00000538970 PLPPR2Q96GM1 343 aa11.16□□□□□ -0.62
VAMP1-206ENST00000538970 TMEM204Q9BSN7 226 aa11.16□□□□□ -0.62
VAMP1-206ENST00000538970 SRXN1Q9BYN0 137 aa11.16□□□□□ -0.62
VAMP1-206ENST00000538970 C12orf49Q9H741 205 aa11.16□□□□□ -0.62
VAMP1-206ENST00000538970 ICAM5Q9UMF0 924 aa11.16□□□□□ -0.62
VAMP1-206ENST00000538970 GPR52Q9Y2T5 361 aa11.16□□□□□ -0.62
VAMP1-206ENST00000538970 TRAF6Q9Y4K3 522 aa11.16□□□□□ -0.62
VAMP1-206ENST00000538970 NBEAL1Q6ZS30 2694 aa11.15□□□□□ -0.62
VAMP1-206ENST00000538970 NPIPA5A0A0B4J1W7 369 aa11.15□□□□□ -0.62
VAMP1-206ENST00000538970 NPIPA7E9PJI5 369 aa11.15□□□□□ -0.62
VAMP1-206ENST00000538970 EFNA2O43921 213 aa11.15□□□□□ -0.62
VAMP1-206ENST00000538970 GCM2O75603 506 aaPredicted RBP11.15□□□□□ -0.62
VAMP1-206ENST00000538970 PABPC4LP0CB38 370 aaKnown RBP11.15□□□□□ -0.62
VAMP1-206ENST00000538970 NPIPA8P0DM63 369 aa11.15□□□□□ -0.62
VAMP1-206ENST00000538970 ATP6V1C1P21283 382 aa11.15□□□□□ -0.62
VAMP1-206ENST00000538970 ADH6P28332 368 aa11.15□□□□□ -0.62
VAMP1-206ENST00000538970 MAPK1P28482 360 aa11.15□□□□□ -0.62
VAMP1-206ENST00000538970 ALDH3A1P30838 453 aa11.15□□□□□ -0.62
VAMP1-206ENST00000538970 SFTPDP35247 375 aa11.15□□□□□ -0.62
VAMP1-206ENST00000538970 RNF144AP50876 292 aaPredicted RBP11.15□□□□□ -0.62
VAMP1-206ENST00000538970 SUMO3P55854 103 aaPredicted RBP11.15□□□□□ -0.62
VAMP1-206ENST00000538970 CARD18P57730 90 aa11.15□□□□□ -0.62
VAMP1-206ENST00000538970 KLHL26Q53HC5 615 aa11.15□□□□□ -0.62
VAMP1-206ENST00000538970 DCST2Q5T1A1 773 aa11.15□□□□□ -0.62
VAMP1-206ENST00000538970 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.15□□□□□ -0.62
VAMP1-206ENST00000538970 GTF2IRD2BQ6EKJ0 949 aa11.15□□□□□ -0.62
VAMP1-206ENST00000538970 TFAP2EQ6VUC0 442 aa11.15□□□□□ -0.62
VAMP1-206ENST00000538970 GTF2IRD2Q86UP8 949 aa11.15□□□□□ -0.62
VAMP1-206ENST00000538970 GABRG1Q8N1C3 465 aa11.15□□□□□ -0.62
VAMP1-206ENST00000538970 ZNF611Q8N823 705 aa11.15□□□□□ -0.62
VAMP1-206ENST00000538970 BANPQ8N9N5 519 aa11.15□□□□□ -0.62
VAMP1-206ENST00000538970 OR56A1Q8NGH5 318 aa11.15□□□□□ -0.62
VAMP1-206ENST00000538970 FBXO27Q8NI29 283 aa11.15□□□□□ -0.62
VAMP1-206ENST00000538970 PHOSPHO1Q8TCT1 267 aa11.15□□□□□ -0.62
VAMP1-206ENST00000538970 TMEM171Q8WVE6 324 aa11.15□□□□□ -0.62
VAMP1-206ENST00000538970 ROBO4Q8WZ75 1007 aa11.15□□□□□ -0.62
VAMP1-206ENST00000538970 OR5P2Q8WZ92 322 aa11.15□□□□□ -0.62
VAMP1-206ENST00000538970 CPNE4Q96A23 557 aaPredicted RBP11.15□□□□□ -0.62
VAMP1-206ENST00000538970 CHMP6Q96FZ7 201 aa11.15□□□□□ -0.62
VAMP1-206ENST00000538970 PPP3R2Q96LZ3 170 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms