RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 DAZAP2Q15038 168 aaPredicted RBP13.45□□□□□ -0.26
RAB40B-202ENST00000538809 SGCBQ16585 318 aa13.45□□□□□ -0.26
RAB40B-202ENST00000538809 NDUFAF6Q330K2 333 aa13.45□□□□□ -0.26
RAB40B-202ENST00000538809 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.45□□□□□ -0.26
RAB40B-202ENST00000538809 AGBL2Q5U5Z8 902 aa13.45□□□□□ -0.26
RAB40B-202ENST00000538809 SPNS3Q6ZMD2 512 aa13.45□□□□□ -0.26
RAB40B-202ENST00000538809 GTPBP8Q8N3Z3 284 aaPredicted RBP13.45□□□□□ -0.26
RAB40B-202ENST00000538809 ZNF614Q8N883 585 aa13.45□□□□□ -0.26
RAB40B-202ENST00000538809 B4GALNT2Q8NHY0 566 aa13.45□□□□□ -0.26
RAB40B-202ENST00000538809 PHOSPHO1Q8TCT1 267 aa13.45□□□□□ -0.26
RAB40B-202ENST00000538809 MGARPQ8TDB4 240 aa13.45□□□□□ -0.26
RAB40B-202ENST00000538809 OR7D2Q96RA2 312 aa13.45□□□□□ -0.26
RAB40B-202ENST00000538809 DPY30Q9C005 99 aa13.45□□□□□ -0.26
RAB40B-202ENST00000538809 RNF122Q9H9V4 155 aa13.45□□□□□ -0.26
RAB40B-202ENST00000538809 ZNF175Q9Y473 711 aa13.45□□□□□ -0.26
RAB40B-202ENST00000538809 A0A087WZY1 265 aa13.44□□□□□ -0.26
RAB40B-202ENST00000538809 RNF103-CHMP3A0A140T963 221 aa13.44□□□□□ -0.26
RAB40B-202ENST00000538809 MSTNO14793 375 aa13.44□□□□□ -0.26
RAB40B-202ENST00000538809 HDAC3O15379 428 aa13.44□□□□□ -0.26
RAB40B-202ENST00000538809 SOX30O94993 753 aa13.44□□□□□ -0.26
RAB40B-202ENST00000538809 CRHP06850 196 aa13.44□□□□□ -0.26
RAB40B-202ENST00000538809 KRT16P08779 473 aa13.44□□□□□ -0.26
RAB40B-202ENST00000538809 IL11P20809 199 aa13.44□□□□□ -0.26
RAB40B-202ENST00000538809 SLC6A8P48029 635 aa13.44□□□□□ -0.26
RAB40B-202ENST00000538809 CASP9P55211 416 aa13.44□□□□□ -0.26
RAB40B-202ENST00000538809 FAM27E3Q08E93 113 aa13.44□□□□□ -0.26
RAB40B-202ENST00000538809 FOXF1Q12946 379 aa13.44□□□□□ -0.26
RAB40B-202ENST00000538809 CTU2Q2VPK5 515 aaKnown RBP13.44□□□□□ -0.26
RAB40B-202ENST00000538809 OLIG3Q7RTU3 272 aa13.44□□□□□ -0.26
RAB40B-202ENST00000538809 ANKRD46Q86W74 232 aa13.44□□□□□ -0.26
RAB40B-202ENST00000538809 MISPQ8IVT2 679 aa13.44□□□□□ -0.26
RAB40B-202ENST00000538809 WDR75Q8IWA0 830 aaKnown RBP13.44□□□□□ -0.26
RAB40B-202ENST00000538809 OR10D3Q8NH80 312 aa13.44□□□□□ -0.26
RAB40B-202ENST00000538809 POC1BQ8TC44 478 aa13.44□□□□□ -0.26
RAB40B-202ENST00000538809 ARL8AQ96BM9 186 aa13.44□□□□□ -0.26
RAB40B-202ENST00000538809 ZBTB8AQ96BR9 441 aa13.44□□□□□ -0.26
RAB40B-202ENST00000538809 MAELQ96JY0 434 aaKnown RBP13.44□□□□□ -0.26
RAB40B-202ENST00000538809 SLC35G5Q96KT7 338 aa13.44□□□□□ -0.26
RAB40B-202ENST00000538809 TEX37Q96LM6 180 aa13.44□□□□□ -0.26
RAB40B-202ENST00000538809 HHATLQ9HCP6 504 aa13.44□□□□□ -0.26
RAB40B-202ENST00000538809 AIG1Q9NVV5 245 aa13.44□□□□□ -0.26
RAB40B-202ENST00000538809 CLEC4AQ9UMR7 237 aa13.44□□□□□ -0.26
RAB40B-202ENST00000538809 RAI1Q7Z5J4 1906 aaPredicted RBP13.43□□□□□ -0.26
RAB40B-202ENST00000538809 PRSS51A0A1B0GVH4 220 aa13.43□□□□□ -0.26
RAB40B-202ENST00000538809 C7orf72A4D263 438 aa13.43□□□□□ -0.26
RAB40B-202ENST00000538809 ZNF195O14628 629 aa13.43□□□□□ -0.26
RAB40B-202ENST00000538809 TNFSF11O14788 317 aa13.43□□□□□ -0.26
RAB40B-202ENST00000538809 KLF11O14901 512 aa13.43□□□□□ -0.26
RAB40B-202ENST00000538809 CXCL13O43927 109 aa13.43□□□□□ -0.26
RAB40B-202ENST00000538809 DSCAMO60469 2012 aa13.43□□□□□ -0.26
RAB40B-202ENST00000538809 NUDT14O95848 222 aa13.43□□□□□ -0.26
RAB40B-202ENST00000538809 FCGR2AP12318 317 aa13.43□□□□□ -0.26
RAB40B-202ENST00000538809 CD1EP15812 388 aa13.43□□□□□ -0.26
RAB40B-202ENST00000538809 PSMA4P25789 261 aaKnown RBP13.43□□□□□ -0.26
RAB40B-202ENST00000538809 SHC1P29353 583 aa13.43□□□□□ -0.26
RAB40B-202ENST00000538809 IL12AP29459 219 aa13.43□□□□□ -0.26
RAB40B-202ENST00000538809 CCKARP32238 428 aa13.43□□□□□ -0.26
RAB40B-202ENST00000538809 CLNS1AP54105 237 aaKnown RBP13.43□□□□□ -0.26
RAB40B-202ENST00000538809 EEF1A1P68104 462 aaKnown RBP13.43□□□□□ -0.26
RAB40B-202ENST00000538809 DPY19L1Q2PZI1 675 aa13.43□□□□□ -0.26
RAB40B-202ENST00000538809 SPANXN4Q5MJ08 99 aa13.43□□□□□ -0.26
RAB40B-202ENST00000538809 EEF1A1P5Q5VTE0 462 aa13.43□□□□□ -0.26
RAB40B-202ENST00000538809 ATG16L1Q676U5 607 aa13.43□□□□□ -0.26
RAB40B-202ENST00000538809 ZNF474Q6S9Z5 364 aaPredicted RBP13.43□□□□□ -0.26
RAB40B-202ENST00000538809 CBLN3Q6UW01 205 aa13.43□□□□□ -0.26
RAB40B-202ENST00000538809 MAVSQ7Z434 540 aa13.43□□□□□ -0.26
RAB40B-202ENST00000538809 C6orf120Q7Z4R8 191 aa13.43□□□□□ -0.26
RAB40B-202ENST00000538809 TMCO5AQ8N6Q1 288 aa13.43□□□□□ -0.26
RAB40B-202ENST00000538809 ZNF527Q8NB42 609 aa13.43□□□□□ -0.26
RAB40B-202ENST00000538809 CHDHQ8NE62 594 aaPredicted RBP13.43□□□□□ -0.26
RAB40B-202ENST00000538809 OR4A15Q8NGL6 344 aa13.43□□□□□ -0.26
RAB40B-202ENST00000538809 MIPOL1Q8TD10 442 aa13.43□□□□□ -0.26
RAB40B-202ENST00000538809 ACTRT2Q8TDY3 377 aa13.43□□□□□ -0.26
RAB40B-202ENST00000538809 NINJ1Q92982 152 aa13.43□□□□□ -0.26
RAB40B-202ENST00000538809 ADGRG7Q96K78 797 aa13.43□□□□□ -0.26
RAB40B-202ENST00000538809 PRRG4Q9BZD6 226 aa13.43□□□□□ -0.26
RAB40B-202ENST00000538809 WDR55Q9H6Y2 383 aaPredicted RBP13.43□□□□□ -0.26
RAB40B-202ENST00000538809 MANSC1Q9H8J5 431 aa13.43□□□□□ -0.26
RAB40B-202ENST00000538809 NKIRAS1Q9NYS0 192 aa13.43□□□□□ -0.26
RAB40B-202ENST00000538809 MARCOQ9UEW3 520 aaPredicted RBP13.43□□□□□ -0.26
RAB40B-202ENST00000538809 CARD8Q9Y2G2 431 aa13.43□□□□□ -0.26
RAB40B-202ENST00000538809 TESMINQ9Y4I5 508 aa13.43□□□□□ -0.26
RAB40B-202ENST00000538809 GPR45Q9Y5Y3 372 aa13.43□□□□□ -0.26
RAB40B-202ENST00000538809 UQCRHLA0A096LP55 91 aa13.42□□□□□ -0.26
RAB40B-202ENST00000538809 A0A0J9YW62 118 aa13.42□□□□□ -0.26
RAB40B-202ENST00000538809 E9PBE3 544 aa13.42□□□□□ -0.26
RAB40B-202ENST00000538809 CPSF4O95639 269 aaKnown RBP13.42□□□□□ -0.26
RAB40B-202ENST00000538809 LINGO3P0C6S8 592 aa13.42□□□□□ -0.26
RAB40B-202ENST00000538809 MATN1P21941 496 aa13.42□□□□□ -0.26
RAB40B-202ENST00000538809 EPHA3P29320 983 aa13.42□□□□□ -0.26
RAB40B-202ENST00000538809 SFTPDP35247 375 aa13.42□□□□□ -0.26
RAB40B-202ENST00000538809 CD79BP40259 229 aa13.42□□□□□ -0.26
RAB40B-202ENST00000538809 ATP12AP54707 1039 aa13.42□□□□□ -0.26
RAB40B-202ENST00000538809 NME5P56597 212 aa13.42□□□□□ -0.26
RAB40B-202ENST00000538809 UFM1P61960 85 aa13.42□□□□□ -0.26
RAB40B-202ENST00000538809 GUSBP1Q15486 140 aa13.42□□□□□ -0.26
RAB40B-202ENST00000538809 KLHL26Q53HC5 615 aa13.42□□□□□ -0.26
RAB40B-202ENST00000538809 ANXA8L1Q5VT79 327 aa13.42□□□□□ -0.26
RAB40B-202ENST00000538809 AP1ARQ63HQ0 302 aa13.42□□□□□ -0.26
RAB40B-202ENST00000538809 BHLHB9Q6PI77 547 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 224.4 ms