RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 EXOC3L2Q2M3D2 409 aa11.32□□□□□ -0.6
DDB1-209ENST00000537877 FGD3Q5JSP0 725 aa11.32□□□□□ -0.6
DDB1-209ENST00000537877 DCAF10Q5QP82 559 aa11.32□□□□□ -0.6
DDB1-209ENST00000537877 OTUD3Q5T2D3 398 aaPredicted RBP11.32□□□□□ -0.6
DDB1-209ENST00000537877 GALNT4Q8N4A0 578 aa11.32□□□□□ -0.6
DDB1-209ENST00000537877 LINC00471Q8N535 108 aa11.32□□□□□ -0.6
DDB1-209ENST00000537877 ADAMTS16Q8TE57 1224 aa11.32□□□□□ -0.6
DDB1-209ENST00000537877 GIPC3Q8TF64 312 aa11.32□□□□□ -0.6
DDB1-209ENST00000537877 ASB15Q8WXK1 588 aa11.32□□□□□ -0.6
DDB1-209ENST00000537877 ALPK1Q96QP1 1244 aa11.32□□□□□ -0.6
DDB1-209ENST00000537877 SECISBP2Q96T21 854 aaKnown RBP11.32□□□□□ -0.6
DDB1-209ENST00000537877 TRIM2Q9C040 744 aa11.32□□□□□ -0.6
DDB1-209ENST00000537877 LAT2Q9GZY6 243 aa11.32□□□□□ -0.6
DDB1-209ENST00000537877 RHCGQ9UBD6 479 aa11.32□□□□□ -0.6
DDB1-209ENST00000537877 PRDM4Q9UKN5 801 aa11.32□□□□□ -0.6
DDB1-209ENST00000537877 KLK13Q9UKR3 277 aa11.32□□□□□ -0.6
DDB1-209ENST00000537877 TMCC3Q9ULS5 477 aa11.32□□□□□ -0.6
DDB1-209ENST00000537877 NINQ8N4C6 2090 aa11.32□□□□□ -0.6
DDB1-209ENST00000537877 GTPBP1O00178 669 aaKnown RBP11.31□□□□□ -0.6
DDB1-209ENST00000537877 TP53I11O14683 189 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 NDUFB5O43674 189 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 CCNB2O95067 398 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 PRG2P13727 222 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 UQCRBP14927 111 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 SOX3P41225 446 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 ACAA2P42765 397 aaKnown RBP11.31□□□□□ -0.6
DDB1-209ENST00000537877 SLC6A8P48029 635 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 RNF144AP50876 292 aaPredicted RBP11.31□□□□□ -0.6
DDB1-209ENST00000537877 FBXW4P57775 412 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 HOXC5Q00444 222 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 EPS8Q12929 822 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 TRAM2Q15035 370 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 OR1Q1Q15612 314 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 MICAQ29983 383 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 RFX4Q33E94 735 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 ZNF791Q3KP31 576 aaPredicted RBP11.31□□□□□ -0.6
DDB1-209ENST00000537877 CRTC2Q53ET0 693 aaPredicted RBP11.31□□□□□ -0.6
DDB1-209ENST00000537877 DCST1Q5T197 706 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 DESI1Q6ICB0 168 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 TMEM81Q6P7N7 255 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 ZNF613Q6PF04 617 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 TBPL2Q6SJ96 375 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 APOOLQ6UXV4 268 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 VASH2Q86V25 355 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 TSPYL5Q86VY4 417 aaPredicted RBP11.31□□□□□ -0.6
DDB1-209ENST00000537877 HS3ST5Q8IZT8 346 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 LSMEM1Q8N8F7 131 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 GATSQ8NAP1 163 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 OR10G2Q8NGC3 310 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 OR52J3Q8NH60 311 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 MAGEE2Q8TD90 523 aaPredicted RBP11.31□□□□□ -0.6
DDB1-209ENST00000537877 GRHL3Q8TE85 626 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 THAP4Q8WY91 577 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 SLC41A3Q96GZ6 507 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 NODALQ96S42 347 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 FUZQ9BT04 418 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 CDCP1Q9H5V8 836 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 TMEM27Q9HBJ8 222 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 ATP13A2Q9NQ11 1180 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 MAN2C1Q9NTJ4 1040 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 SMPD3Q9NY59 655 aaPredicted RBP11.31□□□□□ -0.6
DDB1-209ENST00000537877 PDP1Q9P0J1 537 aaPredicted RBP11.31□□□□□ -0.6
DDB1-209ENST00000537877 KIF17Q9P2E2 1029 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 C15orf41Q9Y2V0 281 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 LRRC42Q9Y546 428 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 ORC6Q9Y5N6 252 aa11.31□□□□□ -0.6
DDB1-209ENST00000537877 MAGED1Q9Y5V3 778 aaPredicted RBP11.31□□□□□ -0.6
DDB1-209ENST00000537877 TRBV4-1A0A0J9YWV2 114 aa11.3□□□□□ -0.6
DDB1-209ENST00000537877 SCO2O43819 266 aa11.3□□□□□ -0.6
DDB1-209ENST00000537877 CYP7B1O75881 506 aa11.3□□□□□ -0.6
DDB1-209ENST00000537877 ANGPTL1O95841 491 aa11.3□□□□□ -0.6
DDB1-209ENST00000537877 ANXA8P13928 327 aa11.3□□□□□ -0.6
DDB1-209ENST00000537877 HTR2AP28223 471 aa11.3□□□□□ -0.6
DDB1-209ENST00000537877 RAD23AP54725 363 aa11.3□□□□□ -0.6
DDB1-209ENST00000537877 RRADP55042 308 aa11.3□□□□□ -0.6
DDB1-209ENST00000537877 CLN3Q13286 438 aa11.3□□□□□ -0.6
DDB1-209ENST00000537877 MEP1AQ16819 746 aa11.3□□□□□ -0.6
DDB1-209ENST00000537877 NDUFAF6Q330K2 333 aa11.3□□□□□ -0.6
DDB1-209ENST00000537877 SWT1Q5T5J6 900 aaKnown RBP11.3□□□□□ -0.6
DDB1-209ENST00000537877 FAHD1Q6P587 224 aa11.3□□□□□ -0.6
DDB1-209ENST00000537877 MARCH3Q86UD3 253 aa11.3□□□□□ -0.6
DDB1-209ENST00000537877 GPALPP1Q8IXQ4 340 aa11.3□□□□□ -0.6
DDB1-209ENST00000537877 TMCO5AQ8N6Q1 288 aa11.3□□□□□ -0.6
DDB1-209ENST00000537877 ATG16L2Q8NAA4 619 aa11.3□□□□□ -0.6
DDB1-209ENST00000537877 CLEC1AQ8NC01 280 aa11.3□□□□□ -0.6
DDB1-209ENST00000537877 SLC38A4Q969I6 547 aa11.3□□□□□ -0.6
DDB1-209ENST00000537877 THOC3Q96J01 351 aaKnown RBP11.3□□□□□ -0.6
DDB1-209ENST00000537877 BARD1Q99728 777 aaKnown RBP11.3□□□□□ -0.6
DDB1-209ENST00000537877 OSBPL11Q9BXB4 747 aa11.3□□□□□ -0.6
DDB1-209ENST00000537877 CTPS2Q9NRF8 586 aa11.3□□□□□ -0.6
DDB1-209ENST00000537877 TEKT2Q9UIF3 430 aa11.3□□□□□ -0.6
DDB1-209ENST00000537877 RAB26Q9ULW5 256 aa11.3□□□□□ -0.6
DDB1-209ENST00000537877 CARD8Q9Y2G2 431 aa11.3□□□□□ -0.6
DDB1-209ENST00000537877 SPEGQ15772 3267 aa11.3□□□□□ -0.6
DDB1-209ENST00000537877 A0A0B4J2E0 115 aa11.29□□□□□ -0.6
DDB1-209ENST00000537877 A0A1B0GX12 115 aa11.29□□□□□ -0.6
DDB1-209ENST00000537877 SH3PXD2BA1X283 911 aa11.29□□□□□ -0.6
DDB1-209ENST00000537877 C7orf72A4D263 438 aa11.29□□□□□ -0.6
DDB1-209ENST00000537877 MASP2O00187 686 aa11.29□□□□□ -0.6
DDB1-209ENST00000537877 CDK2AP1O14519 115 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms