RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 ME2P23368 584 aa12.82□□□□□ -0.36
RTN3P1-201ENST00000536295 RPL14P50914 215 aaKnown RBP12.82□□□□□ -0.36
RTN3P1-201ENST00000536295 RAC1P63000 192 aa12.82□□□□□ -0.36
RTN3P1-201ENST00000536295 FOXF1Q12946 379 aa12.82□□□□□ -0.36
RTN3P1-201ENST00000536295 KEAP1Q14145 624 aa12.82□□□□□ -0.36
RTN3P1-201ENST00000536295 MPP2Q14168 576 aa12.82□□□□□ -0.36
RTN3P1-201ENST00000536295 EXOC3L2Q2M3D2 409 aa12.82□□□□□ -0.36
RTN3P1-201ENST00000536295 NDUFAF6Q330K2 333 aa12.82□□□□□ -0.36
RTN3P1-201ENST00000536295 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.82□□□□□ -0.36
RTN3P1-201ENST00000536295 HBMQ6B0K9 141 aa12.82□□□□□ -0.36
RTN3P1-201ENST00000536295 CBLN3Q6UW01 205 aa12.82□□□□□ -0.36
RTN3P1-201ENST00000536295 FAM214BQ7L5A3 538 aa12.82□□□□□ -0.36
RTN3P1-201ENST00000536295 OR2V1Q8NHB1 315 aa12.82□□□□□ -0.36
RTN3P1-201ENST00000536295 RFWD2Q8NHY2 731 aa12.82□□□□□ -0.36
RTN3P1-201ENST00000536295 MOAP1Q96BY2 351 aa12.82□□□□□ -0.36
RTN3P1-201ENST00000536295 WFIKKN1Q96NZ8 548 aa12.82□□□□□ -0.36
RTN3P1-201ENST00000536295 SORT1Q99523 831 aa12.82□□□□□ -0.36
RTN3P1-201ENST00000536295 SLC39A3Q9BRY0 314 aa12.82□□□□□ -0.36
RTN3P1-201ENST00000536295 MED18Q9BUE0 208 aa12.82□□□□□ -0.36
RTN3P1-201ENST00000536295 NUF2Q9BZD4 464 aa12.82□□□□□ -0.36
RTN3P1-201ENST00000536295 HOXD1Q9GZZ0 328 aa12.82□□□□□ -0.36
RTN3P1-201ENST00000536295 PLEKHF2Q9H8W4 249 aa12.82□□□□□ -0.36
RTN3P1-201ENST00000536295 ASIC5Q9NY37 505 aa12.82□□□□□ -0.36
RTN3P1-201ENST00000536295 C6orf203Q9P0P8 240 aaPredicted RBP12.82□□□□□ -0.36
RTN3P1-201ENST00000536295 RAB21Q9UL25 225 aa12.82□□□□□ -0.36
RTN3P1-201ENST00000536295 MCTS1Q9ULC4 181 aaKnown RBP12.82□□□□□ -0.36
RTN3P1-201ENST00000536295 EMC9Q9Y3B6 208 aa12.82□□□□□ -0.36
RTN3P1-201ENST00000536295 A0A0J9YW62 118 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 RNF103-CHMP3A0A140T963 221 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 A0A1W2PPR1 153 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 C7orf72A4D263 438 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 H3BNH8 94 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 LINGO3P0C6S8 592 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 DHRS4L1P0CG22 281 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 CD8BP10966 210 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 MATN1P21941 496 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 PSMA4P25789 261 aaKnown RBP12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 SFTPDP35247 375 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 UGT2B10P36537 528 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 ATP12AP54707 1039 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 CASP9P55211 416 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 CTBP2P56545 445 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 C21orf58P58505 322 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 OCRLQ01968 901 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 STX3Q13277 289 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 FGFBP1Q14512 234 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 GUSBP1Q15486 140 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 SMU1Q2TAY7 513 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 CTU2Q2VPK5 515 aaKnown RBP12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 KLHL26Q53HC5 615 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 BHLHB9Q6PI77 547 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 OLIG3Q7RTU3 272 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 ZNF550Q7Z398 422 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 C6orf120Q7Z4R8 191 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 CAMKMTQ7Z624 323 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 MTERF4Q7Z6M4 381 aaKnown RBP12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 ANKRD46Q86W74 232 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 LILRA2Q8N149 483 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 TMCO5AQ8N6Q1 288 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 ANKRD42Q8N9B4 389 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 CHDHQ8NE62 594 aaPredicted RBP12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 ATP6V1C2Q8NEY4 427 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 OR4A15Q8NGL6 344 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 FBXO27Q8NI29 283 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 ZC3HAV1LQ96H79 300 aaKnown RBP12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 ADGRG7Q96K78 797 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 SLC35G5Q96KT7 338 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 DPY30Q9C005 99 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 KLHL4Q9C0H6 718 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 CXXC4Q9H2H0 198 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 SERHL2Q9H4I8 314 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 ELOVL5Q9NYP7 299 aa12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.81□□□□□ -0.36
RTN3P1-201ENST00000536295 MED13LQ71F56 2210 aa12.8□□□□□ -0.36
RTN3P1-201ENST00000536295 C16orf97H3BN30 126 aa12.8□□□□□ -0.36
RTN3P1-201ENST00000536295 ADAMDEC1O15204 470 aa12.8□□□□□ -0.36
RTN3P1-201ENST00000536295 GOSR1O95249 250 aa12.8□□□□□ -0.36
RTN3P1-201ENST00000536295 ATE1O95260 518 aa12.8□□□□□ -0.36
RTN3P1-201ENST00000536295 CPSF4O95639 269 aaKnown RBP12.8□□□□□ -0.36
RTN3P1-201ENST00000536295 CD99P14209 185 aa12.8□□□□□ -0.36
RTN3P1-201ENST00000536295 SHC1P29353 583 aa12.8□□□□□ -0.36
RTN3P1-201ENST00000536295 CCKARP32238 428 aa12.8□□□□□ -0.36
RTN3P1-201ENST00000536295 P2RX1P51575 399 aa12.8□□□□□ -0.36
RTN3P1-201ENST00000536295 CCR4P51679 360 aa12.8□□□□□ -0.36
RTN3P1-201ENST00000536295 PPP2R2AP63151 447 aa12.8□□□□□ -0.36
RTN3P1-201ENST00000536295 GPR68Q15743 365 aa12.8□□□□□ -0.36
RTN3P1-201ENST00000536295 TOMM34Q15785 309 aaPredicted RBP12.8□□□□□ -0.36
RTN3P1-201ENST00000536295 PDSS1Q5T2R2 415 aa12.8□□□□□ -0.36
RTN3P1-201ENST00000536295 ANKRD34AQ69YU3 496 aa12.8□□□□□ -0.36
RTN3P1-201ENST00000536295 ESPNLQ6ZVH7 1005 aa12.8□□□□□ -0.36
RTN3P1-201ENST00000536295 OSTF1Q92882 214 aa12.8□□□□□ -0.36
RTN3P1-201ENST00000536295 GMPPAQ96IJ6 420 aaPredicted RBP12.8□□□□□ -0.36
RTN3P1-201ENST00000536295 KLHL15Q96M94 604 aa12.8□□□□□ -0.36
RTN3P1-201ENST00000536295 SDF2Q99470 211 aa12.8□□□□□ -0.36
RTN3P1-201ENST00000536295 PNPOQ9NVS9 261 aa12.8□□□□□ -0.36
RTN3P1-201ENST00000536295 PAQR5Q9NXK6 330 aaPredicted RBP12.8□□□□□ -0.36
RTN3P1-201ENST00000536295 ZNF226Q9NYT6 803 aa12.8□□□□□ -0.36
RTN3P1-201ENST00000536295 ICAM5Q9UMF0 924 aa12.8□□□□□ -0.36
RTN3P1-201ENST00000536295 PCDHGB4Q9UN71 923 aa12.8□□□□□ -0.36
RTN3P1-201ENST00000536295 DTNAQ9Y4J8 743 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms