RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 MED11Q9P086 117 aa12.3□□□□□ -0.44
RPAIN-205ENST00000536255 TNFRSF10DQ9UBN6 386 aa12.3□□□□□ -0.44
RPAIN-205ENST00000536255 FBXL2Q9UKC9 423 aa12.3□□□□□ -0.44
RPAIN-205ENST00000536255 SLC35A3Q9Y2D2 325 aa12.3□□□□□ -0.44
RPAIN-205ENST00000536255 HRH3Q9Y5N1 445 aa12.3□□□□□ -0.44
RPAIN-205ENST00000536255 DIDO1Q9BTC0 2240 aaKnown RBP12.3□□□□□ -0.44
RPAIN-205ENST00000536255 ICE1Q9Y2F5 2266 aa12.3□□□□□ -0.44
RPAIN-205ENST00000536255 C15orf38-AP3S2A0A0A6YYH1 394 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 A0A0G2JPF8 293 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 HNRNPCL2B2RXH8 293 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 HNRNPCL3B7ZW38 293 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 NDUFAB1O14561 156 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 HCRTR2O43614 444 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 EIF4E2O60573 245 aaKnown RBP12.29□□□□□ -0.44
RPAIN-205ENST00000536255 HNRNPCL1O60812 293 aaKnown RBP12.29□□□□□ -0.44
RPAIN-205ENST00000536255 HNRNPCL4P0DMR1 293 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 ARAFP10398 606 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 UBL4AP11441 157 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 SLC6A2P23975 617 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 ADH7P40394 386 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 SMSP52788 366 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 SUMO3P55854 103 aaPredicted RBP12.29□□□□□ -0.44
RPAIN-205ENST00000536255 MTPNP58546 118 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 ART3Q13508 389 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 CAPRIN1Q14444 709 aaKnown RBP12.29□□□□□ -0.44
RPAIN-205ENST00000536255 CYP51A1Q16850 503 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 GXYLT1Q4G148 440 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 NANOGP8Q6NSW7 305 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 NCCRP1Q6ZVX7 275 aaPredicted RBP12.29□□□□□ -0.44
RPAIN-205ENST00000536255 ARPINQ7Z6K5 226 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 IFNEQ86WN2 208 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 TREML1Q86YW5 311 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 CMIPQ8IY22 773 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 OR5M9Q8NGP3 310 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 B4GALNT2Q8NHY0 566 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 BBS10Q8TAM1 723 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 RCN3Q96D15 328 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 TMEM19Q96HH6 336 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 TREX2Q9BQ50 279 aaPredicted RBP12.29□□□□□ -0.44
RPAIN-205ENST00000536255 SPATA9Q9BWV2 254 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 RTN4RQ9BZR6 473 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 IKZF5Q9H5V7 419 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 ARMC7Q9H6L4 198 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 NANOGQ9H9S0 305 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 BCL2L10Q9HD36 194 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 PNPLA3Q9NST1 481 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 TAS2R10Q9NYW0 307 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 SPRR3Q9UBC9 169 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 ACAD8Q9UKU7 415 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 AP3M1Q9Y2T2 418 aa12.29□□□□□ -0.44
RPAIN-205ENST00000536255 A0A087WZY1 265 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 AGAP5A6NIR3 686 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 FIGNL2A6NMB9 653 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 LINC01387J3KSC0 135 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 AIM2O14862 343 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 ZNF264O43296 627 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 CSTAP01040 98 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 DBIP07108 87 aaKnown RBP12.28□□□□□ -0.44
RPAIN-205ENST00000536255 NUDT7P0C024 238 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 IL7RP16871 459 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 AGAP20933 346 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 P2RX1P51575 399 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 ZNF41P51814 821 aaPredicted RBP12.28□□□□□ -0.44
RPAIN-205ENST00000536255 CDK6Q00534 326 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 RBBP4Q09028 425 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 FGFBP1Q14512 234 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 LARS2Q15031 903 aaKnown RBP12.28□□□□□ -0.44
RPAIN-205ENST00000536255 CD226Q15762 336 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 ZSWIM7Q19AV6 140 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 GLYR1Q49A26 553 aaPredicted RBP12.28□□□□□ -0.44
RPAIN-205ENST00000536255 EIPR1Q53HC9 387 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 WLSQ5T9L3 541 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 HIST2H2BCQ6DN03 193 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 REEP3Q6NUK4 255 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 AAGABQ6PD74 315 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 XKRXQ6PP77 449 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 OLIG3Q7RTU3 272 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 SERPINA11Q86U17 422 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 YRDCQ86U90 279 aaKnown RBP12.28□□□□□ -0.44
RPAIN-205ENST00000536255 KRT73Q86Y46 540 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 SLC30A8Q8IWU4 369 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 TMCO5AQ8N6Q1 288 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 C11orf65Q8NCR3 313 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 TOR1AIP2Q8NFQ8 470 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 BCAS4Q8TDM0 211 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 WDR60Q8WVS4 1066 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 MAL2Q969L2 176 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 C1GALT1C1Q96EU7 318 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 SH3YL1Q96HL8 342 aaPredicted RBP12.28□□□□□ -0.44
RPAIN-205ENST00000536255 HOPXQ9BPY8 73 aaPredicted RBP12.28□□□□□ -0.44
RPAIN-205ENST00000536255 ECSITQ9BQ95 431 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 RUBCNLQ9H714 662 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 KAT8Q9H7Z6 458 aaKnown RBP12.28□□□□□ -0.44
RPAIN-205ENST00000536255 KCNE5Q9UJ90 142 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 ZNF232Q9UNY5 417 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 ANGPT4Q9Y264 503 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 IFT52Q9Y366 437 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 L3MBTL1Q9Y468 752 aa12.28□□□□□ -0.44
RPAIN-205ENST00000536255 ZNF407Q9C0G0 2248 aa12.27□□□□□ -0.44
RPAIN-205ENST00000536255 FXYD1O00168 92 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms