RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 GPR63Q9BZJ6 419 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 ZNF700Q9H0M5 742 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 P2RY12Q9H244 342 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 TMEM38AQ9H6F2 299 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 BRF2Q9HAW0 419 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 PARPBPQ9NWS1 579 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 ASB6Q9NWX5 421 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 ARL15Q9NXU5 204 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 SPG21Q9NZD8 308 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 ZNF624Q9P2J8 865 aaPredicted RBP6.15□□□□□ -1.42
USP28-202ENST00000535607 MBD2Q9UBB5 411 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 VPS29Q9UBQ0 182 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 PLEKHB1Q9UF11 243 aaPredicted RBP6.15□□□□□ -1.42
USP28-202ENST00000535607 AFF4Q9UHB7 1163 aaKnown RBP6.15□□□□□ -1.42
USP28-202ENST00000535607 CYB5R1Q9UHQ9 305 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 MAFFQ9ULX9 164 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 SCML2Q9UQR0 700 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 MED16Q9Y2X0 877 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 PRELID3BQ9Y3B1 194 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 PLEKHM1Q9Y4G2 1056 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 CACNG2Q9Y698 323 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 CLCA3PQ9Y6N3 262 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 NLRC5Q86WI3 1866 aa6.15□□□□□ -1.43
USP28-202ENST00000535607 RANBP2P49792 3224 aaKnown RBP6.14□□□□□ -1.43
USP28-202ENST00000535607 MEIKINA0A087WXM9 373 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 A0A0B4J293 547 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 A0A0U1RQS6 177 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 NAP1L6A6NFF2 107 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 PRR23D1E9PI22 279 aaPredicted RBP6.14□□□□□ -1.43
USP28-202ENST00000535607 F5H5T6 163 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 ZNF197O14709 1029 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 SCAMP2O15127 329 aaKnown RBP6.14□□□□□ -1.43
USP28-202ENST00000535607 TAPBPO15533 448 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 SULT1B1O43704 296 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 PSIP1O75475 530 aaKnown RBP6.14□□□□□ -1.43
USP28-202ENST00000535607 STX11O75558 287 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 REM1O75628 298 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 GPANK1O95872 356 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 URODP06132 367 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 GRPP07492 148 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 LINC00271P0C7V0 271 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 PRR23D2P0DMB1 279 aaPredicted RBP6.14□□□□□ -1.43
USP28-202ENST00000535607 HAPLN1P10915 354 aaPredicted RBP6.14□□□□□ -1.43
USP28-202ENST00000535607 CD53P19397 219 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 GCSHP23434 173 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 ACRV1P26436 265 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 CHI3L1P36222 383 aaPredicted RBP6.14□□□□□ -1.43
USP28-202ENST00000535607 CDKN2CP42773 168 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 RFX3P48380 749 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 PITPNBP48739 271 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 HOXA1P49639 335 aaPredicted RBP6.14□□□□□ -1.43
USP28-202ENST00000535607 SMSP52788 366 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 RABGGTBP53611 331 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 ARPP19P56211 112 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 DCDC1P59894 354 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 SHC2P98077 582 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 ZNF91Q05481 1191 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 NFE2L1Q14494 772 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 KRT33BQ14525 404 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 NTRK2Q16620 822 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 MS4A13Q5J8X5 152 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 SPOUT1Q5T280 376 aaKnown RBP6.14□□□□□ -1.43
USP28-202ENST00000535607 FAM69AQ5T7M9 428 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 C12orf73Q69YU5 71 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 SLC8B1Q6J4K2 584 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 NCEH1Q6PIU2 408 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 CD300LGQ6UXG3 332 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 ANGPTL8Q6UXH0 198 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 UNC5DQ6UXZ4 953 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 SLC36A4Q6YBV0 504 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 C3P1Q6ZMU1 363 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 MACC1Q6ZN28 852 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 GDF7Q7Z4P5 450 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 TPRA1Q86W33 373 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 LINC00518Q8N0U6 118 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 KRT78Q8N1N4 520 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 UXS1Q8NBZ7 420 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 OR4M2Q8NGB6 313 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 OR56A1Q8NGH5 318 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 OR52J3Q8NH60 311 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 SVIPQ8NHG7 77 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 HASPINQ8TF76 798 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 C15orf40Q8WUR7 153 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 ASB13Q8WXK3 278 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 ST8SIA4Q92187 359 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 PTP4A1Q93096 173 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 RNF31Q96EP0 1072 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 ZBED6CLQ96FA7 236 aaPredicted RBP6.14□□□□□ -1.43
USP28-202ENST00000535607 SCRN2Q96FV2 425 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 ZNF419Q96HQ0 510 aaPredicted RBP6.14□□□□□ -1.43
USP28-202ENST00000535607 PPP1R16AQ96I34 528 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 C8orf49Q96NF6 230 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 HBEGFQ99075 208 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 NIPSNAP1Q9BPW8 284 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 THAP7Q9BT49 309 aaPredicted RBP6.14□□□□□ -1.43
USP28-202ENST00000535607 WACQ9BTA9 647 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 SPATA5L1Q9BVQ7 753 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 IFT27Q9BW83 186 aa6.14□□□□□ -1.43
USP28-202ENST00000535607 SSBP3Q9BWW4 388 aaPredicted RBP6.14□□□□□ -1.43
USP28-202ENST00000535607 CIPCQ9C0C6 399 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms