RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 TIMP4Q99727 224 aa12.93□□□□□ -0.34
LPCAT3-203ENST00000535479 MICU1Q9BPX6 476 aa12.93□□□□□ -0.34
LPCAT3-203ENST00000535479 MRPS30Q9NP92 439 aaKnown RBP12.93□□□□□ -0.34
LPCAT3-203ENST00000535479 TMEM5Q9Y2B1 443 aa12.93□□□□□ -0.34
LPCAT3-203ENST00000535479 MRPS2Q9Y399 296 aaKnown RBP12.93□□□□□ -0.34
LPCAT3-203ENST00000535479 A0A0A6YYD5 115 aa12.93□□□□□ -0.34
LPCAT3-203ENST00000535479 HLA-DPB1P04440 258 aa12.93□□□□□ -0.34
LPCAT3-203ENST00000535479 ZNF888P0CJ79 500 aaPredicted RBP12.93□□□□□ -0.34
LPCAT3-203ENST00000535479 HIST1H1TP22492 207 aaPredicted RBP12.93□□□□□ -0.34
LPCAT3-203ENST00000535479 BTCP35070 178 aa12.93□□□□□ -0.34
LPCAT3-203ENST00000535479 DUSP5Q16690 384 aa12.93□□□□□ -0.34
LPCAT3-203ENST00000535479 LRRC17Q8N6Y2 441 aa12.93□□□□□ -0.34
LPCAT3-203ENST00000535479 ZNF485Q8NCK3 441 aa12.93□□□□□ -0.34
LPCAT3-203ENST00000535479 OR52E1Q8NGJ3 308 aa12.93□□□□□ -0.34
LPCAT3-203ENST00000535479 OR5W2Q8NH69 310 aa12.93□□□□□ -0.34
LPCAT3-203ENST00000535479 PATE1Q8WXA2 126 aa12.93□□□□□ -0.34
LPCAT3-203ENST00000535479 RFT1Q96AA3 541 aa12.93□□□□□ -0.34
LPCAT3-203ENST00000535479 MS4A6EQ96DS6 147 aa12.93□□□□□ -0.34
LPCAT3-203ENST00000535479 CHFRQ96EP1 664 aa12.93□□□□□ -0.34
LPCAT3-203ENST00000535479 WDR34Q96EX3 536 aa12.93□□□□□ -0.34
LPCAT3-203ENST00000535479 MENTQ9BUN1 341 aa12.93□□□□□ -0.34
LPCAT3-203ENST00000535479 OR10A4Q9H209 315 aa12.93□□□□□ -0.34
LPCAT3-203ENST00000535479 SCML1Q9UN30 329 aa12.93□□□□□ -0.34
LPCAT3-203ENST00000535479 ARHGEF17Q96PE2 2063 aaPredicted RBP12.93□□□□□ -0.34
LPCAT3-203ENST00000535479 A0A1B0GTH9 108 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 CDHR4A6H8M9 788 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 WNT1P04628 370 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 CTSBP07858 339 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 HTR2AP28223 471 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 ERP29P30040 261 aaKnown RBP12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 TFF2Q03403 129 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 ADAM15Q13444 863 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 CRMP1Q14194 572 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 TRAM2Q15035 370 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 CLPPQ16740 277 aaPredicted RBP12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 WDR45BQ5MNZ6 344 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 ZNF836Q6ZNA1 936 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 PIAS4Q8N2W9 510 aaPredicted RBP12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 FAM109AQ8N4B1 249 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 OR4K13Q8NH42 304 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 FANK1Q8TC84 345 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 UBE2E3Q969T4 207 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 SLCO1C1Q9NYB5 712 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 ZNF224Q9NZL3 707 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 SPEF1Q9Y4P9 236 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 TEX13CA0A0J9YWL9 993 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 ACOD1A6NK06 481 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 QSOX1O00391 747 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 CISD3P0C7P0 127 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 LAG3P18627 525 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 MAPK9P45984 424 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 SELENOPP49908 381 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 TSPAN31Q12999 210 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 FGL2Q14314 439 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 FAM198BQ6UWH4 519 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 SLC39A5Q6ZMH5 540 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 IKBIPQ70UQ0 350 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 PEX5LQ8IYB4 626 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 FAM181AQ8N9Y4 354 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 GNPDA2Q8TDQ7 276 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 PTP4A1Q93096 173 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 KCTD12Q96CX2 325 aaKnown RBP12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 MS4A7Q9GZW8 240 aaPredicted RBP12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 KCNN2Q9H2S1 579 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 IL21RQ9HBE5 538 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 NDOR1Q9UHB4 597 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 SPATA2Q9UM82 520 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 ADAM18Q9Y3Q7 739 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 PLXNA2O75051 1894 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 TRDV1A0A1B0GX56 115 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 TMEM129A0AVI4 362 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 GRXCR1A8MXD5 290 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 GMDSO60547 372 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 ADAM11O75078 769 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 RPP14O95059 124 aaKnown RBP12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 OR5F1O95221 314 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 SIX6O95475 246 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 C1QBP02746 253 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 SRPRAP08240 638 aaKnown RBP12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 ACADMP11310 421 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 POU3F2P20265 443 aaPredicted RBP12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 ATP5A1P25705 553 aaKnown RBP12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 PEBP1P30086 187 aaKnown RBP12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 MELKQ14680 651 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 SIGIRRQ6IA17 410 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 SFXN4Q6P4A7 337 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 GATSQ8NAP1 163 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 DNAAF1Q8NEP3 725 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 OR8D1Q8WZ84 308 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 ELP4Q96EB1 424 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 CAMK1GQ96NX5 476 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 OR14A2Q96R54 314 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 SEC22CQ9BRL7 303 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 SPRTNQ9H040 489 aaPredicted RBP12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 C11orf49Q9H6J7 331 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 WDR45Q9Y484 360 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 ASB4Q9Y574 426 aa12.92□□□□□ -0.34
LPCAT3-203ENST00000535479 A8MVJ9 347 aa12.91□□□□□ -0.34
LPCAT3-203ENST00000535479 CTNNB1P35222 781 aa12.91□□□□□ -0.34
LPCAT3-203ENST00000535479 REEP5Q00765 189 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms