RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 WT1P19544 449 aaPredicted RBP10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 IFNGR2P38484 337 aa10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 GATA4P43694 442 aa10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 GPR143P51810 404 aa10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 NR0B1P51843 470 aaKnown RBP10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 PNLIPRP2P54317 469 aa10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 RAD23AP54725 363 aa10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 RRADP55042 308 aa10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 CDC20Q12834 499 aa10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 ZNF141Q15928 474 aa10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 NNATQ16517 81 aa10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 BTBD16Q32M84 506 aa10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 ZNF550Q7Z398 422 aa10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 CBR4Q8N4T8 237 aa10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 SLC15A4Q8N697 577 aa10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 APCDD1LQ8NCL9 501 aa10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 NFAM1Q8NET5 270 aaPredicted RBP10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 GPR32P1Q8NGA4 272 aa10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 VANGL1Q8TAA9 524 aaPredicted RBP10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 TMCO6Q96DC7 493 aa10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 PRRC1Q96M27 445 aa10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 OSBPL11Q9BXB4 747 aa10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 DEFB126Q9BYW3 111 aa10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 QRSL1Q9H0R6 528 aaKnown RBP10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 NXF5Q9H1B4 397 aaKnown RBP10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 ANKRD19PQ9H560 264 aa10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 MMP25Q9NPA2 562 aa10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 TESQ9UGI8 421 aaKnown RBP10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 RAB26Q9ULW5 256 aa10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 POLHQ9Y253 713 aa10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 DTX4Q9Y2E6 619 aa10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 C15orf41Q9Y2V0 281 aa10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 ACACBO00763 2458 aa10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 TPRP12270 2363 aaKnown RBP10.06□□□□□ -0.8
CCDC90B-218ENST00000533761 IGHV3-20A0A0C4DH32 117 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 ARRDC5A6NEK1 342 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 OR6C70A6NIJ9 312 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 K7ENP7 123 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 NME6O75414 186 aaPredicted RBP10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 REM1O75628 298 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 OXSR1O95747 527 aaPredicted RBP10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 HPP00738 406 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 H1F0P07305 194 aaKnown RBP10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 NGFRP08138 427 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 THRBP10828 461 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 COX6A1P12074 109 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 ITPKBP27987 946 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 ABCD3P28288 659 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 CDH12P55289 794 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 TAS2R41P59536 307 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 EEF1A1P68104 462 aaKnown RBP10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 RPP38P78345 283 aaKnown RBP10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 ST3GAL3Q11203 375 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 ATP1A4Q13733 1029 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 DAG1Q14118 895 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 TAF11Q15544 211 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 NRF1Q16656 503 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 DCAF10Q5QP82 559 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 OTUD3Q5T2D3 398 aaPredicted RBP10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 MRPL2Q5T653 305 aaKnown RBP10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 WLSQ5T9L3 541 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 INO80CQ6PI98 192 aaPredicted RBP10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 VRK2Q86Y07 508 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 GRAMD2AQ8IUY3 354 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 MISPQ8IVT2 679 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 GALNT4Q8N4A0 578 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 CLEC1AQ8NC01 280 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 APOBEC4Q8WW27 367 aaKnown RBP10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 ARHGDIGQ99819 225 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 WDR77Q9BQA1 342 aaPredicted RBP10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 AMBRA1Q9C0C7 1298 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 COQ10BQ9H8M1 238 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 SMPD3Q9NY59 655 aaPredicted RBP10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 SELENONQ9NZV5 590 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 FBXL4Q9UKA2 621 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 LRCH1Q9Y2L9 728 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 TESMINQ9Y4I5 508 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 LRRC42Q9Y546 428 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 U3KQV3 271 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 A0A1W2PRQ8 180 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 TMEM229AB2RXF0 380 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 EI24O14681 340 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 ANXA8P13928 327 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 ZNF26P17031 533 aaPredicted RBP10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 TBXA2RP21731 343 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 ADH7P40394 386 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 COPZ1P61923 177 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 DGCR6Q14129 220 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 FGFBP1Q14512 234 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 PCOLCEQ15113 449 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 DCST1Q5T197 706 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 PDZK1Q5T2W1 519 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 TCTN3Q6NUS6 607 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 ZNF836Q6ZNA1 936 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 PLEKHM3Q6ZWE6 761 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 RRM2BQ7LG56 351 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 OFCC1Q8IZS5 231 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 SLC5A8Q8N695 610 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 ZNF321PQ8N8H1 164 aa10.05□□□□□ -0.8
CCDC90B-218ENST00000533761 ZNF441Q8N8Z8 693 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms