RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 RNFT1Q5M7Z0 435 aa15.91■□□□□ 0.14
NXF1-216ENST00000533499 MRPL2Q5T653 305 aaKnown RBP15.91■□□□□ 0.14
NXF1-216ENST00000533499 FNDC7Q5VTL7 733 aa15.91■□□□□ 0.14
NXF1-216ENST00000533499 PRICKLE2Q7Z3G6 844 aa15.91■□□□□ 0.14
NXF1-216ENST00000533499 TMEM251Q8N6I4 163 aa15.91■□□□□ 0.14
NXF1-216ENST00000533499 RNF138Q8WVD3 245 aa15.91■□□□□ 0.14
NXF1-216ENST00000533499 CNOT9Q92600 299 aaKnown RBP15.91■□□□□ 0.14
NXF1-216ENST00000533499 MCUR1Q96AQ8 359 aa15.91■□□□□ 0.14
NXF1-216ENST00000533499 SLC7A6OSQ96CW6 309 aaPredicted RBP15.91■□□□□ 0.14
NXF1-216ENST00000533499 SNRNP40Q96DI7 357 aaKnown RBP15.91■□□□□ 0.14
NXF1-216ENST00000533499 CLPTM1LQ96KA5 538 aa15.91■□□□□ 0.14
NXF1-216ENST00000533499 C1orf21Q9H246 121 aa15.91■□□□□ 0.14
NXF1-216ENST00000533499 ARMC7Q9H6L4 198 aa15.91■□□□□ 0.14
NXF1-216ENST00000533499 LDAHQ9H6V9 325 aa15.91■□□□□ 0.14
NXF1-216ENST00000533499 OLAHQ9NV23 265 aa15.91■□□□□ 0.14
NXF1-216ENST00000533499 ASF1BQ9NVP2 202 aa15.91■□□□□ 0.14
NXF1-216ENST00000533499 RLIMQ9NVW2 624 aa15.91■□□□□ 0.14
NXF1-216ENST00000533499 SLC35A3Q9Y2D2 325 aa15.91■□□□□ 0.14
NXF1-216ENST00000533499 NTNG1Q9Y2I2 539 aa15.91■□□□□ 0.14
NXF1-216ENST00000533499 GPC6Q9Y625 555 aaPredicted RBP15.91■□□□□ 0.14
NXF1-216ENST00000533499 SVILO95425 2214 aa15.91■□□□□ 0.14
NXF1-216ENST00000533499 CBR3O75828 277 aa15.9■□□□□ 0.14
NXF1-216ENST00000533499 ZNF682O95780 498 aa15.9■□□□□ 0.14
NXF1-216ENST00000533499 IFNA14P01570 189 aa15.9■□□□□ 0.14
NXF1-216ENST00000533499 NID1P14543 1247 aa15.9■□□□□ 0.14
NXF1-216ENST00000533499 RPS4Y1P22090 263 aaKnown RBP15.9■□□□□ 0.14
NXF1-216ENST00000533499 DMTNQ08495 405 aa15.9■□□□□ 0.14
NXF1-216ENST00000533499 SOWAHCQ53LP3 525 aaPredicted RBP15.9■□□□□ 0.14
NXF1-216ENST00000533499 CBLN3Q6UW01 205 aa15.9■□□□□ 0.14
NXF1-216ENST00000533499 YRDCQ86U90 279 aaKnown RBP15.9■□□□□ 0.14
NXF1-216ENST00000533499 OR2M3Q8NG83 312 aa15.9■□□□□ 0.14
NXF1-216ENST00000533499 OR14L1PQ8NHC6 308 aa15.9■□□□□ 0.14
NXF1-216ENST00000533499 TAMM41Q96BW9 452 aa15.9■□□□□ 0.14
NXF1-216ENST00000533499 CCDC124Q96CT7 223 aaKnown RBP15.9■□□□□ 0.14
NXF1-216ENST00000533499 HHATLQ9HCP6 504 aa15.9■□□□□ 0.14
NXF1-216ENST00000533499 AGPAT4Q9NRZ5 378 aa15.9■□□□□ 0.14
NXF1-216ENST00000533499 PRPF19Q9UMS4 504 aaKnown RBP15.9■□□□□ 0.14
NXF1-216ENST00000533499 VDAC3Q9Y277 283 aa15.9■□□□□ 0.14
NXF1-216ENST00000533499 RPH3AQ9Y2J0 694 aaPredicted RBP15.9■□□□□ 0.14
NXF1-216ENST00000533499 COL6A6A6NMZ7 2263 aa15.9■□□□□ 0.14
NXF1-216ENST00000533499 FREM3P0C091 2139 aa15.89■□□□□ 0.13
NXF1-216ENST00000533499 FRS3O43559 492 aa15.89■□□□□ 0.13
NXF1-216ENST00000533499 TPST1O60507 370 aa15.89■□□□□ 0.13
NXF1-216ENST00000533499 EIF4E2O60573 245 aaKnown RBP15.89■□□□□ 0.13
NXF1-216ENST00000533499 BCAS1O75363 584 aaPredicted RBP15.89■□□□□ 0.13
NXF1-216ENST00000533499 GCM2O75603 506 aaPredicted RBP15.89■□□□□ 0.13
NXF1-216ENST00000533499 DNAJC8O75937 253 aaPredicted RBP15.89■□□□□ 0.13
NXF1-216ENST00000533499 GLSO94925 669 aaPredicted RBP15.89■□□□□ 0.13
NXF1-216ENST00000533499 THBS1P07996 1170 aa15.89■□□□□ 0.13
NXF1-216ENST00000533499 CELA3AP09093 270 aa15.89■□□□□ 0.13
NXF1-216ENST00000533499 GKN3PP0CG01 181 aa15.89■□□□□ 0.13
NXF1-216ENST00000533499 HK1P19367 917 aa15.89■□□□□ 0.13
NXF1-216ENST00000533499 DPP4P27487 766 aa15.89■□□□□ 0.13
NXF1-216ENST00000533499 KDELR2P33947 212 aa15.89■□□□□ 0.13
NXF1-216ENST00000533499 PGM1P36871 562 aa15.89■□□□□ 0.13
NXF1-216ENST00000533499 ZNF41P51814 821 aaPredicted RBP15.89■□□□□ 0.13
NXF1-216ENST00000533499 PCBP3P57721 371 aaKnown RBP15.89■□□□□ 0.13
NXF1-216ENST00000533499 SLC10A1Q14973 349 aa15.89■□□□□ 0.13
NXF1-216ENST00000533499 CYBRD1Q53TN4 286 aa15.89■□□□□ 0.13
NXF1-216ENST00000533499 GLYATQ6IB77 296 aa15.89■□□□□ 0.13
NXF1-216ENST00000533499 CLIP4Q8N3C7 705 aa15.89■□□□□ 0.13
NXF1-216ENST00000533499 FAM109AQ8N4B1 249 aa15.89■□□□□ 0.13
NXF1-216ENST00000533499 TOR1AIP2Q8NFQ8 470 aa15.89■□□□□ 0.13
NXF1-216ENST00000533499 CPT1CQ8TCG5 803 aa15.89■□□□□ 0.13
NXF1-216ENST00000533499 DTNBP1Q96EV8 351 aa15.89■□□□□ 0.13
NXF1-216ENST00000533499 TPD52L3Q96J77 140 aa15.89■□□□□ 0.13
NXF1-216ENST00000533499 LAT2Q9GZY6 243 aa15.89■□□□□ 0.13
NXF1-216ENST00000533499 PCDHAC1Q9H158 963 aa15.89■□□□□ 0.13
NXF1-216ENST00000533499 ZNF703Q9H7S9 590 aaPredicted RBP15.89■□□□□ 0.13
NXF1-216ENST00000533499 KLHL28Q9NXS3 571 aa15.89■□□□□ 0.13
NXF1-216ENST00000533499 NCKAP5O14513 1909 aa15.89■□□□□ 0.13
NXF1-216ENST00000533499 PCNX3Q9H6A9 2034 aa15.89■□□□□ 0.13
NXF1-216ENST00000533499 BOD1L1Q8NFC6 3051 aa15.88■□□□□ 0.13
NXF1-216ENST00000533499 ADAM10O14672 748 aa15.88■□□□□ 0.13
NXF1-216ENST00000533499 MFN2O95140 757 aa15.88■□□□□ 0.13
NXF1-216ENST00000533499 STAMBPO95630 424 aa15.88■□□□□ 0.13
NXF1-216ENST00000533499 HSD17B1P14061 328 aa15.88■□□□□ 0.13
NXF1-216ENST00000533499 GGT1P19440 569 aa15.88■□□□□ 0.13
NXF1-216ENST00000533499 ME2P23368 584 aa15.88■□□□□ 0.13
NXF1-216ENST00000533499 MSX1P28360 303 aa15.88■□□□□ 0.13
NXF1-216ENST00000533499 HTR1EP28566 365 aa15.88■□□□□ 0.13
NXF1-216ENST00000533499 PRKAR1BP31321 381 aa15.88■□□□□ 0.13
NXF1-216ENST00000533499 P2RX1P51575 399 aa15.88■□□□□ 0.13
NXF1-216ENST00000533499 NCALDP61601 193 aa15.88■□□□□ 0.13
NXF1-216ENST00000533499 EEF1A1P68104 462 aaKnown RBP15.88■□□□□ 0.13
NXF1-216ENST00000533499 SKP2Q13309 424 aa15.88■□□□□ 0.13
NXF1-216ENST00000533499 GLIPR1L2Q4G1C9 344 aa15.88■□□□□ 0.13
NXF1-216ENST00000533499 EIPR1Q53HC9 387 aa15.88■□□□□ 0.13
NXF1-216ENST00000533499 WIPI1Q5MNZ9 446 aaPredicted RBP15.88■□□□□ 0.13
NXF1-216ENST00000533499 ARSKQ6UWY0 536 aa15.88■□□□□ 0.13
NXF1-216ENST00000533499 CCDC80Q76M96 950 aa15.88■□□□□ 0.13
NXF1-216ENST00000533499 CMIPQ8IY22 773 aa15.88■□□□□ 0.13
NXF1-216ENST00000533499 ARHGAP24Q8N264 748 aa15.88■□□□□ 0.13
NXF1-216ENST00000533499 OR5M1Q8NGP8 315 aa15.88■□□□□ 0.13
NXF1-216ENST00000533499 OR10Q1Q8NGQ4 319 aa15.88■□□□□ 0.13
NXF1-216ENST00000533499 ZNF563Q8TA94 476 aa15.88■□□□□ 0.13
NXF1-216ENST00000533499 VANGL1Q8TAA9 524 aaPredicted RBP15.88■□□□□ 0.13
NXF1-216ENST00000533499 FAR1Q8WVX9 515 aa15.88■□□□□ 0.13
NXF1-216ENST00000533499 OIT3Q8WWZ8 545 aa15.88■□□□□ 0.13
NXF1-216ENST00000533499 PINK1Q9BXM7 581 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms