RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 OR5AK3PQ8NH89 298 aa13.87□□□□□ -0.19
CPSF1-211ENST00000533492 WFIKKN1Q96NZ8 548 aa13.87□□□□□ -0.19
CPSF1-211ENST00000533492 OR7D2Q96RA2 312 aa13.87□□□□□ -0.19
CPSF1-211ENST00000533492 MED18Q9BUE0 208 aa13.87□□□□□ -0.19
CPSF1-211ENST00000533492 DPY30Q9C005 99 aa13.87□□□□□ -0.19
CPSF1-211ENST00000533492 CXXC4Q9H2H0 198 aa13.87□□□□□ -0.19
CPSF1-211ENST00000533492 TMEM185BQ9H7F4 350 aa13.87□□□□□ -0.19
CPSF1-211ENST00000533492 AKTIPQ9H8T0 292 aa13.87□□□□□ -0.19
CPSF1-211ENST00000533492 ZNF226Q9NYT6 803 aa13.87□□□□□ -0.19
CPSF1-211ENST00000533492 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.87□□□□□ -0.19
CPSF1-211ENST00000533492 EMC9Q9Y3B6 208 aa13.87□□□□□ -0.19
CPSF1-211ENST00000533492 RAP2CQ9Y3L5 183 aa13.87□□□□□ -0.19
CPSF1-211ENST00000533492 NPIPA5A0A0B4J1W7 369 aa13.86□□□□□ -0.19
CPSF1-211ENST00000533492 C7orf72A4D263 438 aa13.86□□□□□ -0.19
CPSF1-211ENST00000533492 DUXAA6NLW8 204 aa13.86□□□□□ -0.19
CPSF1-211ENST00000533492 NPIPA7E9PJI5 369 aa13.86□□□□□ -0.19
CPSF1-211ENST00000533492 C16orf97H3BN30 126 aa13.86□□□□□ -0.19
CPSF1-211ENST00000533492 TNFSF11O14788 317 aa13.86□□□□□ -0.19
CPSF1-211ENST00000533492 CXCL13O43927 109 aa13.86□□□□□ -0.19
CPSF1-211ENST00000533492 ZNF500O60304 480 aaPredicted RBP13.86□□□□□ -0.19
CPSF1-211ENST00000533492 CGAP01215 116 aa13.86□□□□□ -0.19
CPSF1-211ENST00000533492 NPIPA8P0DM63 369 aa13.86□□□□□ -0.19
CPSF1-211ENST00000533492 CD99P14209 185 aa13.86□□□□□ -0.19
CPSF1-211ENST00000533492 MATN1P21941 496 aa13.86□□□□□ -0.19
CPSF1-211ENST00000533492 ATP12AP54707 1039 aa13.86□□□□□ -0.19
CPSF1-211ENST00000533492 RIPPLY3P57055 190 aa13.86□□□□□ -0.19
CPSF1-211ENST00000533492 C21orf58P58505 322 aa13.86□□□□□ -0.19
CPSF1-211ENST00000533492 PPP2R2AP63151 447 aa13.86□□□□□ -0.19
CPSF1-211ENST00000533492 KLHL26Q53HC5 615 aa13.86□□□□□ -0.19
CPSF1-211ENST00000533492 HBMQ6B0K9 141 aa13.86□□□□□ -0.19
CPSF1-211ENST00000533492 OR4F3Q6IEY1 312 aa13.86□□□□□ -0.19
CPSF1-211ENST00000533492 C6orf120Q7Z4R8 191 aa13.86□□□□□ -0.19
CPSF1-211ENST00000533492 CROCCP2Q86T23 111 aa13.86□□□□□ -0.19
CPSF1-211ENST00000533492 LILRA2Q8N149 483 aa13.86□□□□□ -0.19
CPSF1-211ENST00000533492 OR2V1Q8NHB1 315 aa13.86□□□□□ -0.19
CPSF1-211ENST00000533492 NPAS1Q99742 590 aa13.86□□□□□ -0.19
CPSF1-211ENST00000533492 PAIP2Q9BPZ3 127 aaKnown RBP13.86□□□□□ -0.19
CPSF1-211ENST00000533492 PLEKHF2Q9H8W4 249 aa13.86□□□□□ -0.19
CPSF1-211ENST00000533492 KLHL28Q9NXS3 571 aa13.86□□□□□ -0.19
CPSF1-211ENST00000533492 ASIC5Q9NY37 505 aa13.86□□□□□ -0.19
CPSF1-211ENST00000533492 CLEC4AQ9UMR7 237 aa13.86□□□□□ -0.19
CPSF1-211ENST00000533492 CARD8Q9Y2G2 431 aa13.86□□□□□ -0.19
CPSF1-211ENST00000533492 TESMINQ9Y4I5 508 aa13.86□□□□□ -0.19
CPSF1-211ENST00000533492 KCNE3Q9Y6H6 103 aa13.86□□□□□ -0.19
CPSF1-211ENST00000533492 MAP1AP78559 2803 aaPredicted RBP13.85□□□□□ -0.19
CPSF1-211ENST00000533492 A0A0J9YW62 118 aa13.85□□□□□ -0.19
CPSF1-211ENST00000533492 ADAMDEC1O15204 470 aa13.85□□□□□ -0.19
CPSF1-211ENST00000533492 TUBBP07437 444 aa13.85□□□□□ -0.19
CPSF1-211ENST00000533492 LINGO3P0C6S8 592 aa13.85□□□□□ -0.19
CPSF1-211ENST00000533492 BGNP21810 368 aa13.85□□□□□ -0.19
CPSF1-211ENST00000533492 PSMA4P25789 261 aaKnown RBP13.85□□□□□ -0.19
CPSF1-211ENST00000533492 UGT2B10P36537 528 aa13.85□□□□□ -0.19
CPSF1-211ENST00000533492 SLC6A8P48029 635 aa13.85□□□□□ -0.19
CPSF1-211ENST00000533492 RNF144AP50876 292 aaPredicted RBP13.85□□□□□ -0.19
CPSF1-211ENST00000533492 P2RX1P51575 399 aa13.85□□□□□ -0.19
CPSF1-211ENST00000533492 CARD18P57730 90 aa13.85□□□□□ -0.19
CPSF1-211ENST00000533492 ZNF117Q03924 483 aa13.85□□□□□ -0.19
CPSF1-211ENST00000533492 STX3Q13277 289 aa13.85□□□□□ -0.19
CPSF1-211ENST00000533492 EXOC3L2Q2M3D2 409 aa13.85□□□□□ -0.19
CPSF1-211ENST00000533492 GTF2IRD2BQ6EKJ0 949 aa13.85□□□□□ -0.19
CPSF1-211ENST00000533492 GTF2IRD2Q86UP8 949 aa13.85□□□□□ -0.19
CPSF1-211ENST00000533492 VPS37AQ8NEZ2 397 aa13.85□□□□□ -0.19
CPSF1-211ENST00000533492 OR5D16Q8NGK9 328 aa13.85□□□□□ -0.19
CPSF1-211ENST00000533492 POC1BQ8TC44 478 aa13.85□□□□□ -0.19
CPSF1-211ENST00000533492 OSTF1Q92882 214 aa13.85□□□□□ -0.19
CPSF1-211ENST00000533492 ZBTB9Q96C00 473 aa13.85□□□□□ -0.19
CPSF1-211ENST00000533492 MBD6Q96DN6 1003 aa13.85□□□□□ -0.19
CPSF1-211ENST00000533492 REXO5Q96IC2 774 aaKnown RBP13.85□□□□□ -0.19
CPSF1-211ENST00000533492 GMPPAQ96IJ6 420 aaPredicted RBP13.85□□□□□ -0.19
CPSF1-211ENST00000533492 ADGRG7Q96K78 797 aa13.85□□□□□ -0.19
CPSF1-211ENST00000533492 KLHL15Q96M94 604 aa13.85□□□□□ -0.19
CPSF1-211ENST00000533492 ALPK1Q96QP1 1244 aa13.85□□□□□ -0.19
CPSF1-211ENST00000533492 C20orf27Q9GZN8 174 aa13.85□□□□□ -0.19
CPSF1-211ENST00000533492 FANCFQ9NPI8 374 aa13.85□□□□□ -0.19
CPSF1-211ENST00000533492 TIGARQ9NQ88 270 aa13.85□□□□□ -0.19
CPSF1-211ENST00000533492 GLRX2Q9NS18 164 aa13.85□□□□□ -0.19
CPSF1-211ENST00000533492 C6orf203Q9P0P8 240 aaPredicted RBP13.85□□□□□ -0.19
CPSF1-211ENST00000533492 RAB21Q9UL25 225 aa13.85□□□□□ -0.19
CPSF1-211ENST00000533492 DTNAQ9Y4J8 743 aa13.85□□□□□ -0.19
CPSF1-211ENST00000533492 HRNRQ86YZ3 2850 aaPredicted RBP13.85□□□□□ -0.19
CPSF1-211ENST00000533492 RNF103-CHMP3A0A140T963 221 aa13.84□□□□□ -0.19
CPSF1-211ENST00000533492 RNASET2O00584 256 aaKnown RBP13.84□□□□□ -0.19
CPSF1-211ENST00000533492 DHRS4L1P0CG22 281 aa13.84□□□□□ -0.19
CPSF1-211ENST00000533492 ADH6P28332 368 aa13.84□□□□□ -0.19
CPSF1-211ENST00000533492 SFTPDP35247 375 aa13.84□□□□□ -0.19
CPSF1-211ENST00000533492 SUMO3P55854 103 aaPredicted RBP13.84□□□□□ -0.19
CPSF1-211ENST00000533492 RPS26P62854 115 aaKnown RBP13.84□□□□□ -0.19
CPSF1-211ENST00000533492 FOXF1Q12946 379 aa13.84□□□□□ -0.19
CPSF1-211ENST00000533492 GUSBP1Q15486 140 aa13.84□□□□□ -0.19
CPSF1-211ENST00000533492 CTU2Q2VPK5 515 aaKnown RBP13.84□□□□□ -0.19
CPSF1-211ENST00000533492 HHATQ5VTY9 493 aa13.84□□□□□ -0.19
CPSF1-211ENST00000533492 CBLN3Q6UW01 205 aa13.84□□□□□ -0.19
CPSF1-211ENST00000533492 TGIF2LYQ8IUE0 185 aa13.84□□□□□ -0.19
CPSF1-211ENST00000533492 CLECL1Q8IZS7 167 aa13.84□□□□□ -0.19
CPSF1-211ENST00000533492 TMCO5AQ8N6Q1 288 aa13.84□□□□□ -0.19
CPSF1-211ENST00000533492 OR4A15Q8NGL6 344 aa13.84□□□□□ -0.19
CPSF1-211ENST00000533492 OR6K3Q8NGY3 331 aa13.84□□□□□ -0.19
CPSF1-211ENST00000533492 RFWD2Q8NHY2 731 aa13.84□□□□□ -0.19
CPSF1-211ENST00000533492 FBXO27Q8NI29 283 aa13.84□□□□□ -0.19
CPSF1-211ENST00000533492 SLC35G5Q96KT7 338 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms