RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 SH3BGRL2Q9UJC5 107 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 ICAM5Q9UMF0 924 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 SLC5A6Q9Y289 635 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 ARL2BPQ9Y2Y0 163 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 DNAJC13O75165 2243 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 A0A0G2JPF8 293 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 A0A1B0GUH1 482 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 TMEM247A6NEH6 219 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 CLDN24A6NM45 220 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 HNRNPCL2B2RXH8 293 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 HNRNPCL3B7ZW38 293 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 ZNF264O43296 627 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 EIF4E2O60573 245 aaKnown RBP10.86□□□□□ -0.67
SSBP3-214ENST00000533209 HNRNPCL1O60812 293 aaKnown RBP10.86□□□□□ -0.67
SSBP3-214ENST00000533209 BCAS1O75363 584 aaPredicted RBP10.86□□□□□ -0.67
SSBP3-214ENST00000533209 ACTL6AO96019 429 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 CSTAP01040 98 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 HNRNPCL4P0DMR1 293 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 P2RX1P51575 399 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 CASP6P55212 293 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 MTPNP58546 118 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 KCNJ10P78508 379 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 PLAURQ03405 335 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 SKP2Q13309 424 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 GNA13Q14344 377 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 TMEM44Q2T9K0 475 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 GLYR1Q49A26 553 aaPredicted RBP10.86□□□□□ -0.67
SSBP3-214ENST00000533209 WLSQ5T9L3 541 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 PRAMEF8Q5VWM4 474 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 PRAMEF7Q5VXH5 474 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 NANOGP8Q6NSW7 305 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 C3P1Q6ZMU1 363 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 EIF3MQ7L2H7 374 aaKnown RBP10.86□□□□□ -0.67
SSBP3-214ENST00000533209 PTOV1Q86YD1 416 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 FAM26EQ8N5C1 309 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 METTL25Q8N6Q8 603 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 FAM71CQ8NEG0 241 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 ABTB1Q969K4 478 aaPredicted RBP10.86□□□□□ -0.67
SSBP3-214ENST00000533209 ZNF524Q96C55 264 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 RCN3Q96D15 328 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 SFXN2Q96NB2 322 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 NPAS1Q99742 590 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 THUMPD3Q9BV44 507 aaKnown RBP10.86□□□□□ -0.67
SSBP3-214ENST00000533209 LAT2Q9GZY6 243 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 TMEM38AQ9H6F2 299 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 KAT8Q9H7Z6 458 aaKnown RBP10.86□□□□□ -0.67
SSBP3-214ENST00000533209 NANOGQ9H9S0 305 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 BCL2L10Q9HD36 194 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.86□□□□□ -0.67
SSBP3-214ENST00000533209 MED17Q9NVC6 651 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 VDAC3Q9Y277 283 aa10.86□□□□□ -0.67
SSBP3-214ENST00000533209 RPH3AQ9Y2J0 694 aaPredicted RBP10.86□□□□□ -0.67
SSBP3-214ENST00000533209 A0A087WZY1 265 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 OR2M5A3KFT3 312 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 SHISA8B8ZZ34 492 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 CCL21O00585 134 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 DNAJA2O60884 412 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 AGFG2O95081 481 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 FAM107AO95990 144 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 DBIP07108 87 aaKnown RBP10.85□□□□□ -0.67
SSBP3-214ENST00000533209 NID1P14543 1247 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 CHMP24386 653 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 GCKP35557 465 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 PGM1P36871 562 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 STARP49675 285 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 GZMMP51124 257 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 SUMO3P55854 103 aaPredicted RBP10.85□□□□□ -0.67
SSBP3-214ENST00000533209 CDK6Q00534 326 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 TOMM34Q15785 309 aaPredicted RBP10.85□□□□□ -0.67
SSBP3-214ENST00000533209 PLPPR5Q32ZL2 321 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 RABL3Q5HYI8 236 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 RAET1LQ5VY80 246 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 NET1Q7Z628 596 aaPredicted RBP10.85□□□□□ -0.67
SSBP3-214ENST00000533209 CMIPQ8IY22 773 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 PEX5LQ8IYB4 626 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 ULK2Q8IYT8 1036 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 ANKS4BQ8N8V4 417 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 PCYOX1LQ8NBM8 494 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 TOR1AIP2Q8NFQ8 470 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 OR8J3Q8NGG0 315 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 OR5M1Q8NGP8 315 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 OR52P1PQ8NH57 321 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 NFKBIDQ8NI38 313 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 BBS10Q8TAM1 723 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 GPR119Q8TDV5 335 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 WDR60Q8WVS4 1066 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 CNOT9Q92600 299 aaKnown RBP10.85□□□□□ -0.67
SSBP3-214ENST00000533209 ARSGQ96EG1 525 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 WDYHV1Q96HA8 205 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 DMRTA2Q96SC8 542 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 PRDM14Q9GZV8 571 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 TP63Q9H3D4 680 aaPredicted RBP10.85□□□□□ -0.67
SSBP3-214ENST00000533209 GID8Q9NWU2 228 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 SLC35A3Q9Y2D2 325 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 MEMO1Q9Y316 297 aa10.85□□□□□ -0.67
SSBP3-214ENST00000533209 MED12Q93074 2177 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 GTF3C1Q12789 2109 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 C7orf72A4D263 438 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 WIPF3A6NGB9 483 aa10.84□□□□□ -0.67
SSBP3-214ENST00000533209 C5orf58C9J3I9 102 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms