RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 A6NNC1 897 aa15.5■□□□□ 0.07
PHRF1-204ENST00000532550 SDHDO14521 159 aa15.5■□□□□ 0.07
PHRF1-204ENST00000532550 MSTNO14793 375 aa15.5■□□□□ 0.07
PHRF1-204ENST00000532550 SCN2BO60939 215 aa15.5■□□□□ 0.07
PHRF1-204ENST00000532550 SNNO75324 88 aaPredicted RBP15.5■□□□□ 0.07
PHRF1-204ENST00000532550 SMNDC1O75940 238 aaKnown RBP eCLIP15.5■□□□□ 0.07
PHRF1-204ENST00000532550 AK1P00568 194 aa15.5■□□□□ 0.07
PHRF1-204ENST00000532550 OPN1LWP04000 364 aa15.5■□□□□ 0.07
PHRF1-204ENST00000532550 ME2P23368 584 aa15.5■□□□□ 0.07
PHRF1-204ENST00000532550 EIF1P41567 113 aaKnown RBP15.5■□□□□ 0.07
PHRF1-204ENST00000532550 P2RX1P51575 399 aa15.5■□□□□ 0.07
PHRF1-204ENST00000532550 NME5P56597 212 aa15.5■□□□□ 0.07
PHRF1-204ENST00000532550 PHC1P78364 1004 aa15.5■□□□□ 0.07
PHRF1-204ENST00000532550 ZNF117Q03924 483 aa15.5■□□□□ 0.07
PHRF1-204ENST00000532550 DAZAP2Q15038 168 aaPredicted RBP15.5■□□□□ 0.07
PHRF1-204ENST00000532550 PLPPR5Q32ZL2 321 aa15.5■□□□□ 0.07
PHRF1-204ENST00000532550 SPANXN4Q5MJ08 99 aa15.5■□□□□ 0.07
PHRF1-204ENST00000532550 PDSS1Q5T2R2 415 aa15.5■□□□□ 0.07
PHRF1-204ENST00000532550 FBXW10Q5XX13 1052 aa15.5■□□□□ 0.07
PHRF1-204ENST00000532550 TLCD1Q96CP7 247 aa15.5■□□□□ 0.07
PHRF1-204ENST00000532550 STARD4Q96DR4 205 aa15.5■□□□□ 0.07
PHRF1-204ENST00000532550 RNF145Q96MT1 663 aa15.5■□□□□ 0.07
PHRF1-204ENST00000532550 GPATCH1Q9BRR8 931 aaKnown RBP15.5■□□□□ 0.07
PHRF1-204ENST00000532550 WDR55Q9H6Y2 383 aaPredicted RBP15.5■□□□□ 0.07
PHRF1-204ENST00000532550 RNF122Q9H9V4 155 aa15.5■□□□□ 0.07
PHRF1-204ENST00000532550 RASSF1Q9NS23 344 aa15.5■□□□□ 0.07
PHRF1-204ENST00000532550 PAQR5Q9NXK6 330 aaPredicted RBP15.5■□□□□ 0.07
PHRF1-204ENST00000532550 GALNT8Q9NY28 637 aa15.5■□□□□ 0.07
PHRF1-204ENST00000532550 MARCOQ9UEW3 520 aaPredicted RBP15.5■□□□□ 0.07
PHRF1-204ENST00000532550 CARD8Q9Y2G2 431 aa15.5■□□□□ 0.07
PHRF1-204ENST00000532550 ABCA4P78363 2273 aa15.5■□□□□ 0.07
PHRF1-204ENST00000532550 GOLGA8QA0A0J9YX86 632 aa15.49■□□□□ 0.07
PHRF1-204ENST00000532550 GOLGA8OA6NCC3 632 aa15.49■□□□□ 0.07
PHRF1-204ENST00000532550 E9PBE3 544 aa15.49■□□□□ 0.07
PHRF1-204ENST00000532550 GOLGA8NF8WBI6 632 aa15.49■□□□□ 0.07
PHRF1-204ENST00000532550 STX11O75558 287 aa15.49■□□□□ 0.07
PHRF1-204ENST00000532550 AGR2O95994 175 aa15.49■□□□□ 0.07
PHRF1-204ENST00000532550 FCGR2AP12318 317 aa15.49■□□□□ 0.07
PHRF1-204ENST00000532550 PSMA4P25789 261 aaKnown RBP15.49■□□□□ 0.07
PHRF1-204ENST00000532550 EPHA3P29320 983 aa15.49■□□□□ 0.07
PHRF1-204ENST00000532550 RNF144AP50876 292 aaPredicted RBP15.49■□□□□ 0.07
PHRF1-204ENST00000532550 UFM1P61960 85 aa15.49■□□□□ 0.07
PHRF1-204ENST00000532550 SIRPAP78324 504 aa15.49■□□□□ 0.07
PHRF1-204ENST00000532550 FGFBP1Q14512 234 aa15.49■□□□□ 0.07
PHRF1-204ENST00000532550 CASP8Q14790 479 aa15.49■□□□□ 0.07
PHRF1-204ENST00000532550 GPR68Q15743 365 aa15.49■□□□□ 0.07
PHRF1-204ENST00000532550 ARHGAP11BQ3KRB8 267 aa15.49■□□□□ 0.07
PHRF1-204ENST00000532550 FAM174BQ3ZCQ3 159 aa15.49■□□□□ 0.07
PHRF1-204ENST00000532550 ATAD3BQ5T9A4 648 aa15.49■□□□□ 0.07
PHRF1-204ENST00000532550 NXNQ6DKJ4 435 aa15.49■□□□□ 0.07
PHRF1-204ENST00000532550 CBLN3Q6UW01 205 aa15.49■□□□□ 0.07
PHRF1-204ENST00000532550 C16orf62Q7Z3J2 963 aa15.49■□□□□ 0.07
PHRF1-204ENST00000532550 GGNQ86UU5 652 aa15.49■□□□□ 0.07
PHRF1-204ENST00000532550 CHDHQ8NE62 594 aaPredicted RBP15.49■□□□□ 0.07
PHRF1-204ENST00000532550 XAGE5Q8WWM1 108 aa15.49■□□□□ 0.07
PHRF1-204ENST00000532550 NPAS1Q99742 590 aa15.49■□□□□ 0.07
PHRF1-204ENST00000532550 CLEC4MQ9H2X3 399 aaPredicted RBP15.49■□□□□ 0.07
PHRF1-204ENST00000532550 OR51I1Q9H343 314 aa15.49■□□□□ 0.07
PHRF1-204ENST00000532550 AIG1Q9NVV5 245 aa15.49■□□□□ 0.07
PHRF1-204ENST00000532550 NDRG3Q9UGV2 375 aa15.49■□□□□ 0.07
PHRF1-204ENST00000532550 MCTS1Q9ULC4 181 aaKnown RBP15.49■□□□□ 0.07
PHRF1-204ENST00000532550 OTOGQ6ZRI0 2925 aa15.48■□□□□ 0.07
PHRF1-204ENST00000532550 FAM221AA4D161 298 aa15.48■□□□□ 0.07
PHRF1-204ENST00000532550 NPIPB9F8W1W9 429 aa15.48■□□□□ 0.07
PHRF1-204ENST00000532550 CASKO14936 926 aa15.48■□□□□ 0.07
PHRF1-204ENST00000532550 SYNGR4O95473 234 aa15.48■□□□□ 0.07
PHRF1-204ENST00000532550 ALDOCP09972 364 aaKnown RBP15.48■□□□□ 0.07
PHRF1-204ENST00000532550 LINGO3P0C6S8 592 aa15.48■□□□□ 0.07
PHRF1-204ENST00000532550 OR12D1P0DN82 309 aa15.48■□□□□ 0.07
PHRF1-204ENST00000532550 CHI3L1P36222 383 aaPredicted RBP15.48■□□□□ 0.07
PHRF1-204ENST00000532550 CPOXP36551 454 aa15.48■□□□□ 0.07
PHRF1-204ENST00000532550 KIR2DL2P43627 348 aaPredicted RBP15.48■□□□□ 0.07
PHRF1-204ENST00000532550 CASP9P55211 416 aa15.48■□□□□ 0.07
PHRF1-204ENST00000532550 SUMO3P55854 103 aaPredicted RBP15.48■□□□□ 0.07
PHRF1-204ENST00000532550 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.48■□□□□ 0.07
PHRF1-204ENST00000532550 VWA1Q6PCB0 445 aa15.48■□□□□ 0.07
PHRF1-204ENST00000532550 ESPNLQ6ZVH7 1005 aa15.48■□□□□ 0.07
PHRF1-204ENST00000532550 BTLAQ7Z6A9 289 aa15.48■□□□□ 0.07
PHRF1-204ENST00000532550 LILRA2Q8N149 483 aa15.48■□□□□ 0.07
PHRF1-204ENST00000532550 OR10D3Q8NH80 312 aa15.48■□□□□ 0.07
PHRF1-204ENST00000532550 RFWD2Q8NHY2 731 aa15.48■□□□□ 0.07
PHRF1-204ENST00000532550 POC1BQ8TC44 478 aa15.48■□□□□ 0.07
PHRF1-204ENST00000532550 MIPOL1Q8TD10 442 aa15.48■□□□□ 0.07
PHRF1-204ENST00000532550 DACH2Q96NX9 599 aa15.48■□□□□ 0.07
PHRF1-204ENST00000532550 ZBTB18Q99592 522 aa15.48■□□□□ 0.07
PHRF1-204ENST00000532550 SLC39A3Q9BRY0 314 aa15.48■□□□□ 0.07
PHRF1-204ENST00000532550 NMUR2Q9GZQ4 415 aa15.48■□□□□ 0.07
PHRF1-204ENST00000532550 SERHL2Q9H4I8 314 aa15.48■□□□□ 0.07
PHRF1-204ENST00000532550 BTNL2Q9UIR0 455 aa15.48■□□□□ 0.07
PHRF1-204ENST00000532550 MKLN1Q9UL63 735 aa15.48■□□□□ 0.07
PHRF1-204ENST00000532550 ICAM5Q9UMF0 924 aa15.48■□□□□ 0.07
PHRF1-204ENST00000532550 EDARQ9UNE0 448 aa15.48■□□□□ 0.07
PHRF1-204ENST00000532550 UQCRHLA0A096LP55 91 aa15.47■□□□□ 0.07
PHRF1-204ENST00000532550 ADAMDEC1O15204 470 aa15.47■□□□□ 0.07
PHRF1-204ENST00000532550 ZNF264O43296 627 aa15.47■□□□□ 0.07
PHRF1-204ENST00000532550 OIP5O43482 229 aa15.47■□□□□ 0.07
PHRF1-204ENST00000532550 CXCL13O43927 109 aa15.47■□□□□ 0.07
PHRF1-204ENST00000532550 EIF4E2O60573 245 aaKnown RBP15.47■□□□□ 0.07
PHRF1-204ENST00000532550 FCMRO60667 390 aa15.47■□□□□ 0.07
PHRF1-204ENST00000532550 PLGP00747 810 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms