RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 RGNQ15493 299 aa12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 BCL2A1Q16548 175 aa12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 PLPPR5Q32ZL2 321 aa12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 ACSF3Q4G176 576 aaPredicted RBP12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 ATAD3BQ5T9A4 648 aa12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 TMEM211Q6ICI0 200 aa12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 XKRXQ6PP77 449 aa12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 B3GNT6Q6ZMB0 384 aa12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 LRRC74BQ6ZQY2 392 aa12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 ZNF619Q8N2I2 560 aa12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 FAM71CQ8NEG0 241 aa12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 ZPLD1Q8TCW7 415 aa12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 SLC38A5Q8WUX1 472 aa12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 OIT3Q8WWZ8 545 aa12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 ARSGQ96EG1 525 aa12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 SH3YL1Q96HL8 342 aaPredicted RBP12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 SFXN2Q96NB2 322 aa12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 UCN2Q96RP3 112 aa12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 QRSL1Q9H0R6 528 aaKnown RBP12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 HHATLQ9HCP6 504 aa12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 MED17Q9NVC6 651 aa12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 PLEKHB1Q9UF11 243 aaPredicted RBP12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 DKKL1Q9UK85 242 aa12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 CARD8Q9Y2G2 431 aa12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 WDR45Q9Y484 360 aa12.6□□□□□ -0.39
TSPAN4-220ENST00000532375 MAST4O15021 2626 aa12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 HCFC1P51610 2035 aa12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 C7orf72A4D263 438 aa12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 CD8B2A6NJW9 211 aa12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 ETV2O00321 342 aaPredicted RBP12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 FBP2O00757 339 aa12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 HCRTR2O43614 444 aa12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 GMFGO60234 142 aa12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 ANP32DO95626 131 aa12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 NTN1O95631 604 aa12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 HPGDP15428 266 aa12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 CEACAM8P31997 349 aaPredicted RBP12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 PTGER4P35408 488 aa12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 PGM1P36871 562 aa12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 P2RX1P51575 399 aa12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 SUCLG1P53597 346 aaKnown RBP12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 SEC24CP53992 1094 aa12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 KLF10Q13118 480 aa12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 SKP2Q13309 424 aa12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 ART3Q13508 389 aa12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 FGFBP1Q14512 234 aa12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 TOMM34Q15785 309 aaPredicted RBP12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 ZNF630Q2M218 657 aaPredicted RBP12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 RUNDC3AQ59EK9 446 aa12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 POMZP3Q6PJE2 187 aa12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 MAMDC2Q7Z304 686 aaPredicted RBP12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 HMGN2P46Q86SG4 172 aa12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 PM20D2Q8IYS1 436 aa12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 EID3Q8N140 333 aa12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 GTPBP8Q8N3Z3 284 aaPredicted RBP12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 ZNF527Q8NB42 609 aa12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 B4GALNT2Q8NHY0 566 aa12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 GPR119Q8TDV5 335 aa12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 TUBA1CQ9BQE3 449 aa12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 MTHFD2LQ9H903 347 aaPredicted RBP12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 ALKBH4Q9NXW9 302 aa12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 CAMK2AQ9UQM7 478 aa12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 RNF6Q9Y252 685 aa12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 L3MBTL1Q9Y468 752 aa12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 NBPF19A0A087WUL8 3843 aa12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 DSPPQ9NZW4 1301 aa12.59□□□□□ -0.39
TSPAN4-220ENST00000532375 A0A087WZY1 265 aa12.58□□□□□ -0.4
TSPAN4-220ENST00000532375 A0A0G2JNJ9 132 aa12.58□□□□□ -0.4
TSPAN4-220ENST00000532375 AGAP5A6NIR3 686 aa12.58□□□□□ -0.4
TSPAN4-220ENST00000532375 CLDN24A6NM45 220 aa12.58□□□□□ -0.4
TSPAN4-220ENST00000532375 H0YC42 278 aa12.58□□□□□ -0.4
TSPAN4-220ENST00000532375 ZNF264O43296 627 aa12.58□□□□□ -0.4
TSPAN4-220ENST00000532375 EIF4E2O60573 245 aaKnown RBP12.58□□□□□ -0.4
TSPAN4-220ENST00000532375 ADAM11O75078 769 aa12.58□□□□□ -0.4
TSPAN4-220ENST00000532375 SNRPB2P08579 225 aaKnown RBP12.58□□□□□ -0.4
TSPAN4-220ENST00000532375 GP1BBP13224 206 aa12.58□□□□□ -0.4
TSPAN4-220ENST00000532375 GPX2P18283 190 aa12.58□□□□□ -0.4
TSPAN4-220ENST00000532375 COL8A1P27658 744 aa12.58□□□□□ -0.4
TSPAN4-220ENST00000532375 CRATP43155 626 aa12.58□□□□□ -0.4
TSPAN4-220ENST00000532375 SMSP52788 366 aa12.58□□□□□ -0.4
TSPAN4-220ENST00000532375 GYS2P54840 703 aa12.58□□□□□ -0.4
TSPAN4-220ENST00000532375 TPD52P55327 224 aaPredicted RBP12.58□□□□□ -0.4
TSPAN4-220ENST00000532375 DSTNP60981 165 aa12.58□□□□□ -0.4
TSPAN4-220ENST00000532375 GPAT3Q53EU6 434 aa12.58□□□□□ -0.4
TSPAN4-220ENST00000532375 NSUN5P2Q63ZY6 315 aa12.58□□□□□ -0.4
TSPAN4-220ENST00000532375 HIST2H2BCQ6DN03 193 aa12.58□□□□□ -0.4
TSPAN4-220ENST00000532375 AAGABQ6PD74 315 aa12.58□□□□□ -0.4
TSPAN4-220ENST00000532375 ENPP6Q6UWR7 440 aa12.58□□□□□ -0.4
TSPAN4-220ENST00000532375 CCDC71Q8IV32 467 aaPredicted RBP12.58□□□□□ -0.4
TSPAN4-220ENST00000532375 LIX1LQ8IVB5 337 aa12.58□□□□□ -0.4
TSPAN4-220ENST00000532375 NAXEQ8NCW5 288 aa12.58□□□□□ -0.4
TSPAN4-220ENST00000532375 RND1Q92730 232 aa12.58□□□□□ -0.4
TSPAN4-220ENST00000532375 PMM1Q92871 262 aa12.58□□□□□ -0.4
TSPAN4-220ENST00000532375 LAT2Q9GZY6 243 aa12.58□□□□□ -0.4
TSPAN4-220ENST00000532375 Q9UFV3 132 aa12.58□□□□□ -0.4
TSPAN4-220ENST00000532375 LEF1Q9UJU2 399 aaPredicted RBP12.58□□□□□ -0.4
TSPAN4-220ENST00000532375 VDAC3Q9Y277 283 aa12.58□□□□□ -0.4
TSPAN4-220ENST00000532375 NDUFAF1Q9Y375 327 aa12.58□□□□□ -0.4
TSPAN4-220ENST00000532375 CHST2Q9Y4C5 530 aa12.58□□□□□ -0.4
TSPAN4-220ENST00000532375 MBD3L4A6NDZ8 208 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms