RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 TMEM80Q96HE8 168 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 ZFP3Q96NJ6 502 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 FEVQ99581 238 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 LMF2Q9BU23 707 aaKnown RBP7.41□□□□□ -1.22
CTNND1-230ENST00000532245 SLC6A20Q9NP91 592 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 DYNLRB1Q9NP97 96 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 TRPV5Q9NQA5 729 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 MALT1Q9UDY8 824 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 KLHL21Q9UJP4 597 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 NOSIPQ9Y314 301 aaKnown RBP7.41□□□□□ -1.22
CTNND1-230ENST00000532245 IER3IP1Q9Y5U9 82 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 DLEC1Q9Y238 1755 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 A0A1B0GTQ1 180 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 TAF4O00268 1085 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 CASC3O15234 703 aaKnown RBP7.41□□□□□ -1.22
CTNND1-230ENST00000532245 PLOD3O60568 738 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 OXSR1O95747 527 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-230ENST00000532245 CRISP1P54107 249 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 RAB25P57735 213 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 CXADRP78310 365 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 ATP6AP1Q15904 470 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 CPZQ66K79 652 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 OLIG3Q7RTU3 272 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 FTMTQ8N4E7 242 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 OR9Q2Q8NGE9 314 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 ADAMTS16Q8TE57 1224 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 SNRNP27Q8WVK2 155 aaKnown RBP7.41□□□□□ -1.22
CTNND1-230ENST00000532245 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-230ENST00000532245 SECISBP2Q96T21 854 aaKnown RBP7.41□□□□□ -1.22
CTNND1-230ENST00000532245 CXorf36Q9H7Y0 433 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 VNN3Q9NY84 501 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 COMMD3Q9UBI1 195 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 NPFFR2Q9Y5X5 522 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 TRAV27A0A087WT01 109 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 LOC110117498-PIK3R3F6TDL0 507 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 HSPA12AO43301 675 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 CSN2P05814 226 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 FAUP35544 74 aaKnown RBP7.41□□□□□ -1.22
CTNND1-230ENST00000532245 POU3F4P49335 361 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 RIDAP52758 137 aaKnown RBP7.41□□□□□ -1.22
CTNND1-230ENST00000532245 STARD6P59095 220 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 PPIAP62937 165 aaKnown RBP7.41□□□□□ -1.22
CTNND1-230ENST00000532245 ZNF846Q147U1 533 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 RUNDC3AQ59EK9 446 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 HBMQ6B0K9 141 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 LIN54Q6MZP7 749 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 TMEM53Q6P2H8 277 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 Q6ZSR9 355 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 LINGO2Q7L985 606 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 APLFQ8IW19 511 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-230ENST00000532245 CA13Q8N1Q1 262 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 DTWD1Q8N5C7 304 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 CHTF18Q8WVB6 975 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 INIPQ9NRY2 104 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 PLEK2Q9NYT0 353 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 SLAMF8Q9P0V8 285 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 TRPM7Q96QT4 1865 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 A0A1W2PR48 441 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 ISPDA4D126 451 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 ZNF878C9JN71 531 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 SSNA1O43805 119 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 SLITRK5O94991 958 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 FCER2P06734 321 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 OR3A3P47888 321 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 OR3A2P47893 321 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 MLC1Q15049 377 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 LHFPL3Q86UP9 236 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 TREX2Q9BQ50 279 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-230ENST00000532245 NT5DC2Q9H857 520 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 A0A1W2PPK0 400 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 A0A1W2PPW3 197 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 ZNF99A8MXY4 864 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-230ENST00000532245 APOFQ13790 326 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 TAB1Q15750 504 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 TSTQ16762 297 aaKnown RBP7.41□□□□□ -1.22
CTNND1-230ENST00000532245 B3GNT6Q6ZMB0 384 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 METTL25Q8N6Q8 603 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 LRR1Q96L50 414 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 ULBP2Q9BZM5 246 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 NGBQ9NPG2 151 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 PCDHGA7Q9Y5G6 932 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 TMEM14AQ9Y6G1 99 aa7.41□□□□□ -1.22
CTNND1-230ENST00000532245 NUP205Q92621 2012 aa7.4□□□□□ -1.22
CTNND1-230ENST00000532245 TRMUO75648 421 aaKnown RBP7.4□□□□□ -1.22
CTNND1-230ENST00000532245 OR2J2O76002 312 aa7.4□□□□□ -1.22
CTNND1-230ENST00000532245 IST1P53990 364 aa7.4□□□□□ -1.22
CTNND1-230ENST00000532245 CLDN17P56750 224 aa7.4□□□□□ -1.22
CTNND1-230ENST00000532245 NKAPLQ5M9Q1 402 aa7.4□□□□□ -1.22
CTNND1-230ENST00000532245 PERM1Q5SV97 790 aa7.4□□□□□ -1.22
CTNND1-230ENST00000532245 NIPAL3Q6P499 406 aa7.4□□□□□ -1.22
CTNND1-230ENST00000532245 LRRC18Q8N456 261 aa7.4□□□□□ -1.22
CTNND1-230ENST00000532245 SLC16A11Q8NCK7 471 aa7.4□□□□□ -1.22
CTNND1-230ENST00000532245 SDR9C7Q8NEX9 313 aa7.4□□□□□ -1.22
CTNND1-230ENST00000532245 OR1L3Q8NH93 324 aa7.4□□□□□ -1.22
CTNND1-230ENST00000532245 BPIFA2Q96DR5 249 aa7.4□□□□□ -1.22
CTNND1-230ENST00000532245 ELP4Q96EB1 424 aa7.4□□□□□ -1.22
CTNND1-230ENST00000532245 TMEM41AQ96HV5 264 aa7.4□□□□□ -1.22
CTNND1-230ENST00000532245 CNN2Q99439 309 aaKnown RBP7.4□□□□□ -1.22
CTNND1-230ENST00000532245 SGPP1Q9BX95 441 aa7.4□□□□□ -1.22
CTNND1-230ENST00000532245 CCDC86Q9H6F5 360 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms