RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 AQP7O14520 342 aa13.14□□□□□ -0.31
CPSF1-206ENST00000531480 PGM3O95394 542 aa13.14□□□□□ -0.31
CPSF1-206ENST00000531480 DBIP07108 87 aaKnown RBP13.14□□□□□ -0.31
CPSF1-206ENST00000531480 THBS1P07996 1170 aa13.14□□□□□ -0.31
CPSF1-206ENST00000531480 NID1P14543 1247 aa13.14□□□□□ -0.31
CPSF1-206ENST00000531480 GFRA1P56159 465 aa13.14□□□□□ -0.31
CPSF1-206ENST00000531480 DLX5P56178 289 aa13.14□□□□□ -0.31
CPSF1-206ENST00000531480 PCBP3P57721 371 aaKnown RBP13.14□□□□□ -0.31
CPSF1-206ENST00000531480 KCNJ10P78508 379 aa13.14□□□□□ -0.31
CPSF1-206ENST00000531480 CDK6Q00534 326 aa13.14□□□□□ -0.31
CPSF1-206ENST00000531480 ZNF117Q03924 483 aa13.14□□□□□ -0.31
CPSF1-206ENST00000531480 SKP2Q13309 424 aa13.14□□□□□ -0.31
CPSF1-206ENST00000531480 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.14□□□□□ -0.31
CPSF1-206ENST00000531480 OR5M10Q6IEU7 315 aa13.14□□□□□ -0.31
CPSF1-206ENST00000531480 REEP3Q6NUK4 255 aa13.14□□□□□ -0.31
CPSF1-206ENST00000531480 ARHGAP11AQ6P4F7 1023 aa13.14□□□□□ -0.31
CPSF1-206ENST00000531480 CBLN3Q6UW01 205 aa13.14□□□□□ -0.31
CPSF1-206ENST00000531480 ARPINQ7Z6K5 226 aa13.14□□□□□ -0.31
CPSF1-206ENST00000531480 ATCAYQ86WG3 371 aa13.14□□□□□ -0.31
CPSF1-206ENST00000531480 ZZZ3Q8IYH5 903 aa13.14□□□□□ -0.31
CPSF1-206ENST00000531480 FAM83FQ8NEG4 500 aaPredicted RBP13.14□□□□□ -0.31
CPSF1-206ENST00000531480 BBS10Q8TAM1 723 aa13.14□□□□□ -0.31
CPSF1-206ENST00000531480 MCUR1Q96AQ8 359 aa13.14□□□□□ -0.31
CPSF1-206ENST00000531480 ARSGQ96EG1 525 aa13.14□□□□□ -0.31
CPSF1-206ENST00000531480 ZNF583Q96ND8 569 aa13.14□□□□□ -0.31
CPSF1-206ENST00000531480 BTBD10Q9BSF8 475 aa13.14□□□□□ -0.31
CPSF1-206ENST00000531480 RSPO3Q9BXY4 272 aaPredicted RBP13.14□□□□□ -0.31
CPSF1-206ENST00000531480 LAT2Q9GZY6 243 aa13.14□□□□□ -0.31
CPSF1-206ENST00000531480 QRSL1Q9H0R6 528 aaKnown RBP13.14□□□□□ -0.31
CPSF1-206ENST00000531480 DEFB127Q9H1M4 99 aa13.14□□□□□ -0.31
CPSF1-206ENST00000531480 DSN1Q9H410 356 aa13.14□□□□□ -0.31
CPSF1-206ENST00000531480 EXOSC3Q9NQT5 275 aaKnown RBP13.14□□□□□ -0.31
CPSF1-206ENST00000531480 ARL8BQ9NVJ2 186 aa13.14□□□□□ -0.31
CPSF1-206ENST00000531480 MED11Q9P086 117 aa13.14□□□□□ -0.31
CPSF1-206ENST00000531480 ABCD2Q9UBJ2 740 aa13.14□□□□□ -0.31
CPSF1-206ENST00000531480 PRDM4Q9UKN5 801 aa13.14□□□□□ -0.31
CPSF1-206ENST00000531480 SLC35A3Q9Y2D2 325 aa13.14□□□□□ -0.31
CPSF1-206ENST00000531480 GPC6Q9Y625 555 aaPredicted RBP13.14□□□□□ -0.31
CPSF1-206ENST00000531480 TRGV5A0A0B4J1U4 118 aa13.13□□□□□ -0.31
CPSF1-206ENST00000531480 B2RBV5 119 aa13.13□□□□□ -0.31
CPSF1-206ENST00000531480 AIM2O14862 343 aa13.13□□□□□ -0.31
CPSF1-206ENST00000531480 ZNF264O43296 627 aa13.13□□□□□ -0.31
CPSF1-206ENST00000531480 OIP5O43482 229 aa13.13□□□□□ -0.31
CPSF1-206ENST00000531480 GCM2O75603 506 aaPredicted RBP13.13□□□□□ -0.31
CPSF1-206ENST00000531480 STSP08842 583 aa13.13□□□□□ -0.31
CPSF1-206ENST00000531480 DPP4P27487 766 aa13.13□□□□□ -0.31
CPSF1-206ENST00000531480 P2RX1P51575 399 aa13.13□□□□□ -0.31
CPSF1-206ENST00000531480 B3GALT5-AS1P59052 145 aa13.13□□□□□ -0.31
CPSF1-206ENST00000531480 MRPL49Q13405 166 aaKnown RBP13.13□□□□□ -0.31
CPSF1-206ENST00000531480 SPATS1Q496A3 300 aa13.13□□□□□ -0.31
CPSF1-206ENST00000531480 RNF220Q5VTB9 566 aa13.13□□□□□ -0.31
CPSF1-206ENST00000531480 GFRALQ6UXV0 394 aa13.13□□□□□ -0.31
CPSF1-206ENST00000531480 EIF3MQ7L2H7 374 aaKnown RBP13.13□□□□□ -0.31
CPSF1-206ENST00000531480 SPPL2CQ8IUH8 684 aa13.13□□□□□ -0.31
CPSF1-206ENST00000531480 GRAMD2AQ8IUY3 354 aa13.13□□□□□ -0.31
CPSF1-206ENST00000531480 SLC30A8Q8IWU4 369 aa13.13□□□□□ -0.31
CPSF1-206ENST00000531480 SLC15A3Q8IY34 581 aa13.13□□□□□ -0.31
CPSF1-206ENST00000531480 GATSQ8NAP1 163 aa13.13□□□□□ -0.31
CPSF1-206ENST00000531480 C11orf65Q8NCR3 313 aa13.13□□□□□ -0.31
CPSF1-206ENST00000531480 HIPK4Q8NE63 616 aa13.13□□□□□ -0.31
CPSF1-206ENST00000531480 OR4K17Q8NGC6 315 aa13.13□□□□□ -0.31
CPSF1-206ENST00000531480 OR10A6Q8NH74 314 aa13.13□□□□□ -0.31
CPSF1-206ENST00000531480 B4GALNT2Q8NHY0 566 aa13.13□□□□□ -0.31
CPSF1-206ENST00000531480 NFKBIDQ8NI38 313 aa13.13□□□□□ -0.31
CPSF1-206ENST00000531480 PHOSPHO1Q8TCT1 267 aa13.13□□□□□ -0.31
CPSF1-206ENST00000531480 REXO5Q96IC2 774 aaKnown RBP13.13□□□□□ -0.31
CPSF1-206ENST00000531480 KLHDC3Q9BQ90 382 aa13.13□□□□□ -0.31
CPSF1-206ENST00000531480 PTGES2Q9H7Z7 377 aa13.13□□□□□ -0.31
CPSF1-206ENST00000531480 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.13□□□□□ -0.31
CPSF1-206ENST00000531480 CMTM6Q9NX76 183 aa13.13□□□□□ -0.31
CPSF1-206ENST00000531480 CHST2Q9Y4C5 530 aa13.13□□□□□ -0.31
CPSF1-206ENST00000531480 MED12Q93074 2177 aa13.13□□□□□ -0.31
CPSF1-206ENST00000531480 A0A087WZY1 265 aa13.12□□□□□ -0.31
CPSF1-206ENST00000531480 A0A1B0GTH9 108 aa13.12□□□□□ -0.31
CPSF1-206ENST00000531480 CDHR4A6H8M9 788 aa13.12□□□□□ -0.31
CPSF1-206ENST00000531480 H0YHG0 523 aa13.12□□□□□ -0.31
CPSF1-206ENST00000531480 BCAS1O75363 584 aaPredicted RBP13.12□□□□□ -0.31
CPSF1-206ENST00000531480 STAMBPO95630 424 aa13.12□□□□□ -0.31
CPSF1-206ENST00000531480 LINGO3P0C6S8 592 aa13.12□□□□□ -0.31
CPSF1-206ENST00000531480 UBL4AP11441 157 aa13.12□□□□□ -0.31
CPSF1-206ENST00000531480 CHMP24386 653 aa13.12□□□□□ -0.31
CPSF1-206ENST00000531480 PCGF2P35227 344 aa13.12□□□□□ -0.31
CPSF1-206ENST00000531480 UQCRFS1P47985 274 aa13.12□□□□□ -0.31
CPSF1-206ENST00000531480 NUDT2P50583 147 aa13.12□□□□□ -0.31
CPSF1-206ENST00000531480 EEF1A1P68104 462 aaKnown RBP13.12□□□□□ -0.31
CPSF1-206ENST00000531480 HSF1Q00613 529 aa13.12□□□□□ -0.31
CPSF1-206ENST00000531480 CRYZQ08257 329 aaKnown RBP13.12□□□□□ -0.31
CPSF1-206ENST00000531480 SCARB2Q14108 478 aa13.12□□□□□ -0.31
CPSF1-206ENST00000531480 VEZF1Q14119 521 aa13.12□□□□□ -0.31
CPSF1-206ENST00000531480 ZSWIM7Q19AV6 140 aa13.12□□□□□ -0.31
CPSF1-206ENST00000531480 VMACQ2NL98 169 aa13.12□□□□□ -0.31
CPSF1-206ENST00000531480 EIPR1Q53HC9 387 aa13.12□□□□□ -0.31
CPSF1-206ENST00000531480 RPS26P11Q5JNZ5 115 aaPredicted RBP13.12□□□□□ -0.31
CPSF1-206ENST00000531480 VASNQ6EMK4 673 aa13.12□□□□□ -0.31
CPSF1-206ENST00000531480 PEX5LQ8IYB4 626 aa13.12□□□□□ -0.31
CPSF1-206ENST00000531480 GPR119Q8TDV5 335 aa13.12□□□□□ -0.31
CPSF1-206ENST00000531480 WDR60Q8WVS4 1066 aa13.12□□□□□ -0.31
CPSF1-206ENST00000531480 SLC35B4Q969S0 331 aa13.12□□□□□ -0.31
CPSF1-206ENST00000531480 LRMDAQ9H2I8 198 aa13.12□□□□□ -0.31
CPSF1-206ENST00000531480 SLC6A15Q9H2J7 730 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms