RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 CEP112Q8N8E3 955 aa10.2□□□□□ -0.78
AMBRA1-207ENST00000529553 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.2□□□□□ -0.78
AMBRA1-207ENST00000529553 MUS81Q96NY9 551 aa10.2□□□□□ -0.78
AMBRA1-207ENST00000529553 SORCS2Q96PQ0 1159 aa10.2□□□□□ -0.78
AMBRA1-207ENST00000529553 PSD2Q9BQI7 771 aa10.2□□□□□ -0.78
AMBRA1-207ENST00000529553 SAP130Q9H0E3 1048 aa10.2□□□□□ -0.78
AMBRA1-207ENST00000529553 TMEM185BQ9H7F4 350 aa10.2□□□□□ -0.78
AMBRA1-207ENST00000529553 SLC35C2Q9NQQ7 365 aa10.2□□□□□ -0.78
AMBRA1-207ENST00000529553 SENP1Q9P0U3 644 aa10.2□□□□□ -0.78
AMBRA1-207ENST00000529553 ING1Q9UK53 422 aaPredicted RBP10.2□□□□□ -0.78
AMBRA1-207ENST00000529553 NFU1Q9UMS0 254 aa10.2□□□□□ -0.78
AMBRA1-207ENST00000529553 SLC12A4Q9UP95 1085 aa10.2□□□□□ -0.78
AMBRA1-207ENST00000529553 PLCE1Q9P212 2302 aa10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 NPIPA5A0A0B4J1W7 369 aa10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 LRP5LA4QPB2 252 aa10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 E7ESA3 106 aa10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 NPIPA7E9PJI5 369 aa10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 LILRA1O75019 489 aa10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 KCNH1O95259 989 aa10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 PSMG1O95456 288 aa10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 ESRRBO95718 433 aa10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 LINGO3P0C6S8 592 aa10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 NPIPA8P0DM63 369 aa10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 ENPP1P22413 925 aa10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 APEX1P27695 318 aaKnown RBP10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 CCNG1P51959 295 aa10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 SNRPD2P62316 118 aaKnown RBP10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 SLC18A2Q05940 514 aa10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 PDIA2Q13087 525 aaKnown RBP10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 FAM83EQ2M2I3 478 aa10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 GRAMD1BQ3KR37 738 aa10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 GGTA1PQ4G0N0 100 aa10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 MIDNQ504T8 468 aa10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 GRTP1Q5TC63 336 aa10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 FBXW9Q5XUX1 488 aa10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 ZNF100Q8IYN0 542 aa10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 TEX29Q8N6K0 151 aa10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 OR52N5Q8NH56 324 aa10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 ACTRT1Q8TDG2 376 aa10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 SLC9A6Q92581 669 aa10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 CDK15Q96Q40 435 aa10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 LMF2Q9BU23 707 aaKnown RBP10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 ELOVL6Q9H5J4 265 aa10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 CXorf36Q9H7Y0 433 aa10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 LZTFL1Q9NQ48 299 aa10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 DMGDHQ9UI17 866 aaKnown RBP10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 MCM8Q9UJA3 840 aa10.19□□□□□ -0.78
AMBRA1-207ENST00000529553 CIB4A0PJX0 185 aa10.18□□□□□ -0.78
AMBRA1-207ENST00000529553 CXorf49A8MYA2 514 aaPredicted RBP10.18□□□□□ -0.78
AMBRA1-207ENST00000529553 MYO1GB0I1T2 1018 aa10.18□□□□□ -0.78
AMBRA1-207ENST00000529553 B4DSR2 109 aa10.18□□□□□ -0.78
AMBRA1-207ENST00000529553 M0R1B8 84 aa10.18□□□□□ -0.78
AMBRA1-207ENST00000529553 KIF2AO00139 706 aaPredicted RBP10.18□□□□□ -0.78
AMBRA1-207ENST00000529553 ZNF195O14628 629 aa10.18□□□□□ -0.78
AMBRA1-207ENST00000529553 EFNA2O43921 213 aa10.18□□□□□ -0.78
AMBRA1-207ENST00000529553 CYTIPO60759 359 aa10.18□□□□□ -0.78
AMBRA1-207ENST00000529553 PIAS1O75925 651 aa10.18□□□□□ -0.78
AMBRA1-207ENST00000529553 LCN1P31025 176 aa10.18□□□□□ -0.78
AMBRA1-207ENST00000529553 SFTPDP35247 375 aa10.18□□□□□ -0.78
AMBRA1-207ENST00000529553 CHRNEQ04844 493 aa10.18□□□□□ -0.78
AMBRA1-207ENST00000529553 RASGEF1BQ0VAM2 473 aa10.18□□□□□ -0.78
AMBRA1-207ENST00000529553 OCLNQ16625 522 aa10.18□□□□□ -0.78
AMBRA1-207ENST00000529553 TMEM176BQ3YBM2 270 aaPredicted RBP10.18□□□□□ -0.78
AMBRA1-207ENST00000529553 GLE1Q53GS7 698 aaKnown RBP10.18□□□□□ -0.78
AMBRA1-207ENST00000529553 RINLQ6ZS11 566 aa10.18□□□□□ -0.78
AMBRA1-207ENST00000529553 GALNT5Q7Z7M9 940 aa10.18□□□□□ -0.78
AMBRA1-207ENST00000529553 OR2L13Q8N349 312 aa10.18□□□□□ -0.78
AMBRA1-207ENST00000529553 C1orf52Q8N6N3 182 aaKnown RBP10.18□□□□□ -0.78
AMBRA1-207ENST00000529553 OR4C3Q8NH37 302 aa10.18□□□□□ -0.78
AMBRA1-207ENST00000529553 ZNF75CPQ92670 426 aaPredicted RBP10.18□□□□□ -0.78
AMBRA1-207ENST00000529553 EXOSC8Q96B26 276 aaKnown RBP10.18□□□□□ -0.78
AMBRA1-207ENST00000529553 FBXO17Q96EF6 278 aa10.18□□□□□ -0.78
AMBRA1-207ENST00000529553 RAB1BQ9H0U4 201 aa10.18□□□□□ -0.78
AMBRA1-207ENST00000529553 VPS29Q9UBQ0 182 aa10.18□□□□□ -0.78
AMBRA1-207ENST00000529553 JRKLQ9Y4A0 524 aa10.18□□□□□ -0.78
AMBRA1-207ENST00000529553 SPEF1Q9Y4P9 236 aa10.18□□□□□ -0.78
AMBRA1-207ENST00000529553 PCDHB14Q9Y5E9 798 aa10.18□□□□□ -0.78
AMBRA1-207ENST00000529553 CCT8L1PA6NM43 557 aa10.17□□□□□ -0.78
AMBRA1-207ENST00000529553 B9A039 149 aa10.17□□□□□ -0.78
AMBRA1-207ENST00000529553 UPK1AO00322 258 aa10.17□□□□□ -0.78
AMBRA1-207ENST00000529553 RAD51DO75771 328 aa10.17□□□□□ -0.78
AMBRA1-207ENST00000529553 OXSR1O95747 527 aaPredicted RBP10.17□□□□□ -0.78
AMBRA1-207ENST00000529553 IGKV1D-16P01601 117 aa10.17□□□□□ -0.78
AMBRA1-207ENST00000529553 IL3P08700 152 aa10.17□□□□□ -0.78
AMBRA1-207ENST00000529553 IFI6P09912 130 aa10.17□□□□□ -0.78
AMBRA1-207ENST00000529553 SHC1P29353 583 aa10.17□□□□□ -0.78
AMBRA1-207ENST00000529553 IL2RGP31785 369 aa10.17□□□□□ -0.78
AMBRA1-207ENST00000529553 GABRA3P34903 492 aa10.17□□□□□ -0.78
AMBRA1-207ENST00000529553 SERPINF1P36955 418 aa10.17□□□□□ -0.78
AMBRA1-207ENST00000529553 ARL1P40616 181 aaPredicted RBP10.17□□□□□ -0.78
AMBRA1-207ENST00000529553 GSTM5P46439 218 aa10.17□□□□□ -0.78
AMBRA1-207ENST00000529553 KHKP50053 298 aa10.17□□□□□ -0.78
AMBRA1-207ENST00000529553 FOXL1Q12952 345 aa10.17□□□□□ -0.78
AMBRA1-207ENST00000529553 SLC29A2Q14542 456 aa10.17□□□□□ -0.78
AMBRA1-207ENST00000529553 FASTKD3Q14CZ7 662 aaKnown RBP10.17□□□□□ -0.78
AMBRA1-207ENST00000529553 GABRA6Q16445 453 aa10.17□□□□□ -0.78
AMBRA1-207ENST00000529553 SGO1Q5FBB7 561 aa10.17□□□□□ -0.78
AMBRA1-207ENST00000529553 HIST2H2BDQ6DRA6 164 aa10.17□□□□□ -0.78
AMBRA1-207ENST00000529553 GLCCI1Q86VQ1 547 aa10.17□□□□□ -0.78
AMBRA1-207ENST00000529553 PLD6Q8N2A8 252 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms