RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 GOT1L1Q8NHS2 421 aaPredicted RBP11.67□□□□□ -0.54
TSKU-203ENST00000527881 SMAP2Q8WU79 429 aaPredicted RBP11.67□□□□□ -0.54
TSKU-203ENST00000527881 SMIM4Q8WVI0 70 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 GSN-AS1Q9NRJ2 163 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 MYEF2Q9P2K5 600 aaKnown RBP11.67□□□□□ -0.54
TSKU-203ENST00000527881 LOC285556D6RIA3 1793 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 TMEM200CA6NKL6 621 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 E9PI62 339 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 NPIPB8E9PQR5 432 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 H0YIV9 168 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 KRT33AO76009 404 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 SLC16A8O95907 504 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 STXBP1P61764 594 aaKnown RBP11.67□□□□□ -0.54
TSKU-203ENST00000527881 GUCA2BQ16661 112 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 NDUFAF6Q330K2 333 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 LINC00303Q3SY05 128 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 LRRC37A5PQ49AS3 106 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 KIAA1211LQ6NV74 962 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 FCAMRQ8WWV6 532 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 NEIL2Q969S2 332 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 MRPS18AQ9NVS2 196 aaKnown RBP11.67□□□□□ -0.54
TSKU-203ENST00000527881 MARK1Q9P0L2 795 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 CARNS1A5YM72 827 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 KDM4EB2RXH2 506 aaPredicted RBP11.67□□□□□ -0.54
TSKU-203ENST00000527881 GALR3O60755 368 aaPredicted RBP11.67□□□□□ -0.54
TSKU-203ENST00000527881 MT-ND5P03915 603 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 RB1P06400 928 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 PTGER1P34995 402 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 ATP5C1P36542 298 aaKnown RBP11.67□□□□□ -0.54
TSKU-203ENST00000527881 C21orf58P58505 322 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 TLE2Q04725 743 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 STX4Q12846 297 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 HES5Q5TA89 166 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 SPRYD7Q5W111 196 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 TPGS1Q6ZTW0 290 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 C11orf96Q7Z7L8 435 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 TPRA1Q86W33 373 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 ZNF485Q8NCK3 441 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 TMIEQ8NEW7 156 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 PIGXQ8TBF5 258 aa11.67□□□□□ -0.54
TSKU-203ENST00000527881 NPDC1Q9NQX5 325 aaPredicted RBP11.67□□□□□ -0.54
TSKU-203ENST00000527881 ZSWIM8A7E2V4 1837 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 A0A087WUU8 490 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 OR6C68A6NDL8 312 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 GLTPD2A6NH11 291 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 TXNL1O43396 289 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 UGDHO60701 494 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 PAK4O96013 591 aaPredicted RBP11.66□□□□□ -0.54
TSKU-203ENST00000527881 F2P00734 622 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 CATP04040 527 aaKnown RBP11.66□□□□□ -0.54
TSKU-203ENST00000527881 CORO1AP31146 461 aaKnown RBP11.66□□□□□ -0.54
TSKU-203ENST00000527881 RFC3P40938 356 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 UBXN2BQ14CS0 331 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 C4orf46Q504U0 113 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 LDLRAD3Q86YD5 345 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 SPICQ8N5J4 248 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 FAM71CQ8NEG0 241 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 OR6S1Q8NH40 331 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 SUSD3Q96L08 255 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 LHX3Q9UBR4 397 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 PQLC2LA1A4F0 135 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 OR14I1A6ND48 311 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 F12P00748 615 aaPredicted RBP11.66□□□□□ -0.54
TSKU-203ENST00000527881 TYRP14679 529 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 CENPAP49450 140 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 ART1P52961 327 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 ARFIP1P53367 373 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 SMAD2Q15796 467 aaKnown RBP11.66□□□□□ -0.54
TSKU-203ENST00000527881 MANEAQ5SRI9 462 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 C1orf94Q6P1W5 598 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 RBMS3Q6XE24 437 aaKnown RBP11.66□□□□□ -0.54
TSKU-203ENST00000527881 LRRC56Q8IYG6 542 aaPredicted RBP11.66□□□□□ -0.54
TSKU-203ENST00000527881 LINC00471Q8N535 108 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 KLK6Q92876 244 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 RGMAQ96B86 450 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 TMEM159Q96B96 161 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 TREM1Q9NP99 234 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 HINT3Q9NQE9 182 aaKnown RBP11.66□□□□□ -0.54
TSKU-203ENST00000527881 KLHL9Q9P2J3 617 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 KANTRA0A1W2PQU2 76 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 M0QZQ0 153 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 SNAPC5O75971 98 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 NFATC1O95644 943 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 IFNA4P05014 189 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 CRYBA1P05813 215 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 GCGRP47871 477 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 LUMP51884 338 aaPredicted RBP11.66□□□□□ -0.54
TSKU-203ENST00000527881 RING1Q06587 406 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 PIP5KL1Q5T9C9 394 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 C2orf73Q8N5S3 287 aaPredicted RBP11.66□□□□□ -0.54
TSKU-203ENST00000527881 OR14A16Q8NHC5 309 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 SLC25A32Q9H2D1 315 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 CACYBPQ9HB71 228 aaKnown RBP11.66□□□□□ -0.54
TSKU-203ENST00000527881 STOX2Q9P2F5 926 aaPredicted RBP11.66□□□□□ -0.54
TSKU-203ENST00000527881 OPN4Q9UHM6 478 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 GPN3Q9UHW5 284 aaPredicted RBP11.66□□□□□ -0.54
TSKU-203ENST00000527881 DYRK1BQ9Y463 629 aa11.66□□□□□ -0.54
TSKU-203ENST00000527881 RTCAO00442 366 aaKnown RBP11.65□□□□□ -0.54
TSKU-203ENST00000527881 ACAA1P09110 424 aaPredicted RBP11.65□□□□□ -0.54
TSKU-203ENST00000527881 MAT2AP31153 395 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms