RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 AVL9Q8NBF6 648 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 BBS1Q8NFJ9 593 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 PFN4Q8NHR9 129 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 ADAMTS18Q8TE60 1221 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 DOK4Q8TEW6 326 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 BPIFA2Q96DR5 249 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 KATNB1Q9BVA0 655 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 FAM60AQ9NP50 221 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 TOR4AQ9NXH8 423 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 CYP8B1Q9UNU6 501 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 YARS2Q9Y2Z4 477 aaKnown RBP14.22□□□□□ -0.13
USH1C-207ENST00000527720 CACNA1IQ9P0X4 2223 aa14.22□□□□□ -0.13
USH1C-207ENST00000527720 NPIPA5A0A0B4J1W7 369 aa14.21□□□□□ -0.13
USH1C-207ENST00000527720 A0A1W2PPC4 97 aa14.21□□□□□ -0.13
USH1C-207ENST00000527720 FAM86C2PA6NEL3 165 aa14.21□□□□□ -0.13
USH1C-207ENST00000527720 NPIPA7E9PJI5 369 aa14.21□□□□□ -0.13
USH1C-207ENST00000527720 CHP2O43745 196 aa14.21□□□□□ -0.13
USH1C-207ENST00000527720 SRPX2O60687 465 aaPredicted RBP14.21□□□□□ -0.13
USH1C-207ENST00000527720 NPIPA8P0DM63 369 aa14.21□□□□□ -0.13
USH1C-207ENST00000527720 RBM34P42696 430 aaKnown RBP14.21□□□□□ -0.13
USH1C-207ENST00000527720 ZNF79Q15937 498 aa14.21□□□□□ -0.13
USH1C-207ENST00000527720 PRTGQ2VWP7 1150 aa14.21□□□□□ -0.13
USH1C-207ENST00000527720 DDI2Q5TDH0 399 aa14.21□□□□□ -0.13
USH1C-207ENST00000527720 OR8H2Q8N162 312 aa14.21□□□□□ -0.13
USH1C-207ENST00000527720 ARIH2OSQ8N7S6 290 aa14.21□□□□□ -0.13
USH1C-207ENST00000527720 OR9A4Q8NGU2 314 aa14.21□□□□□ -0.13
USH1C-207ENST00000527720 KIAA1143Q96AT1 154 aaPredicted RBP14.21□□□□□ -0.13
USH1C-207ENST00000527720 KLHDC7BQ96G42 594 aa14.21□□□□□ -0.13
USH1C-207ENST00000527720 FAM210AQ96ND0 272 aa14.21□□□□□ -0.13
USH1C-207ENST00000527720 TM9SF2Q99805 663 aa14.21□□□□□ -0.13
USH1C-207ENST00000527720 SRRQ9GZT4 340 aa14.21□□□□□ -0.13
USH1C-207ENST00000527720 STARD5Q9NSY2 213 aa14.21□□□□□ -0.13
USH1C-207ENST00000527720 C20orf141Q9NUB4 165 aa14.21□□□□□ -0.13
USH1C-207ENST00000527720 WSB2Q9NYS7 404 aaPredicted RBP14.21□□□□□ -0.13
USH1C-207ENST00000527720 IL20RAQ9UHF4 553 aa14.21□□□□□ -0.13
USH1C-207ENST00000527720 PAIP2BQ9ULR5 123 aaKnown RBP14.21□□□□□ -0.13
USH1C-207ENST00000527720 BAIAP2Q9UQB8 552 aa14.21□□□□□ -0.13
USH1C-207ENST00000527720 POLHQ9Y253 713 aa14.21□□□□□ -0.13
USH1C-207ENST00000527720 MRPS33Q9Y291 106 aaKnown RBP14.21□□□□□ -0.13
USH1C-207ENST00000527720 PCDHGB2Q9Y5G2 931 aa14.21□□□□□ -0.13
USH1C-207ENST00000527720 BRWD1Q9NSI6 2320 aa14.21□□□□□ -0.13
USH1C-207ENST00000527720 A0A0B4J2E0 115 aa14.21□□□□□ -0.14
USH1C-207ENST00000527720 A0A1B0GX12 115 aa14.21□□□□□ -0.14
USH1C-207ENST00000527720 SOCS6O14544 535 aa14.21□□□□□ -0.14
USH1C-207ENST00000527720 RNH1P13489 461 aaKnown RBP14.21□□□□□ -0.14
USH1C-207ENST00000527720 SPNP16150 400 aa14.21□□□□□ -0.14
USH1C-207ENST00000527720 S1PR1P21453 382 aa14.21□□□□□ -0.14
USH1C-207ENST00000527720 CD79BP40259 229 aa14.21□□□□□ -0.14
USH1C-207ENST00000527720 PSG6Q00889 435 aa14.21□□□□□ -0.14
USH1C-207ENST00000527720 CD300CQ08708 224 aa14.21□□□□□ -0.14
USH1C-207ENST00000527720 GLYR1Q49A26 553 aaPredicted RBP14.21□□□□□ -0.14
USH1C-207ENST00000527720 PRPF38BQ5VTL8 546 aaKnown RBP14.21□□□□□ -0.14
USH1C-207ENST00000527720 XKRXQ6PP77 449 aa14.21□□□□□ -0.14
USH1C-207ENST00000527720 SMARCD3Q6STE5 483 aa14.21□□□□□ -0.14
USH1C-207ENST00000527720 ZNF322Q6U7Q0 402 aaPredicted RBP14.21□□□□□ -0.14
USH1C-207ENST00000527720 ZNF438Q7Z4V0 828 aa14.21□□□□□ -0.14
USH1C-207ENST00000527720 GDF15Q99988 308 aa14.21□□□□□ -0.14
USH1C-207ENST00000527720 FOLH1BQ9HBA9 442 aa14.21□□□□□ -0.14
USH1C-207ENST00000527720 CMC2Q9NRP2 79 aa14.21□□□□□ -0.14
USH1C-207ENST00000527720 INPP5EQ9NRR6 644 aa14.21□□□□□ -0.14
USH1C-207ENST00000527720 SIGLEC7Q9Y286 467 aa14.21□□□□□ -0.14
USH1C-207ENST00000527720 H3BQ06 376 aaPredicted RBP14.2□□□□□ -0.14
USH1C-207ENST00000527720 HCRTR1O43613 425 aa14.2□□□□□ -0.14
USH1C-207ENST00000527720 HCN1O60741 890 aa14.2□□□□□ -0.14
USH1C-207ENST00000527720 LALBAP00709 142 aa14.2□□□□□ -0.14
USH1C-207ENST00000527720 TYRP1P17643 537 aa14.2□□□□□ -0.14
USH1C-207ENST00000527720 RNF144AP50876 292 aaPredicted RBP14.2□□□□□ -0.14
USH1C-207ENST00000527720 IGLV3-21P80748 117 aaPredicted RBP14.2□□□□□ -0.14
USH1C-207ENST00000527720 PLAURQ03405 335 aa14.2□□□□□ -0.14
USH1C-207ENST00000527720 LRIT3Q3SXY7 679 aa14.2□□□□□ -0.14
USH1C-207ENST00000527720 PLBD1Q6P4A8 553 aa14.2□□□□□ -0.14
USH1C-207ENST00000527720 ZNF761Q86XN6 746 aaPredicted RBP14.2□□□□□ -0.14
USH1C-207ENST00000527720 MCATQ8IVS2 390 aaKnown RBP14.2□□□□□ -0.14
USH1C-207ENST00000527720 SHISA5Q8N114 240 aa14.2□□□□□ -0.14
USH1C-207ENST00000527720 ACBD7Q8N6N7 88 aa14.2□□□□□ -0.14
USH1C-207ENST00000527720 SIRT6Q8N6T7 355 aa14.2□□□□□ -0.14
USH1C-207ENST00000527720 SPRYD4Q8WW59 207 aaPredicted RBP14.2□□□□□ -0.14
USH1C-207ENST00000527720 GPR174Q9BXC1 333 aa14.2□□□□□ -0.14
USH1C-207ENST00000527720 TRIM2Q9C040 744 aa14.2□□□□□ -0.14
USH1C-207ENST00000527720 SYNDIG1Q9H7V2 258 aa14.2□□□□□ -0.14
USH1C-207ENST00000527720 ABCB9Q9NP78 766 aa14.2□□□□□ -0.14
USH1C-207ENST00000527720 ATP13A2Q9NQ11 1180 aa14.2□□□□□ -0.14
USH1C-207ENST00000527720 C14orf119Q9NWQ9 140 aa14.2□□□□□ -0.14
USH1C-207ENST00000527720 TBC1D24Q9ULP9 559 aa14.2□□□□□ -0.14
USH1C-207ENST00000527720 THADAQ6YHU6 1953 aa14.2□□□□□ -0.14
USH1C-207ENST00000527720 A0A1W2PQL4 384 aaPredicted RBP14.2□□□□□ -0.14
USH1C-207ENST00000527720 SLC22A31A6NKX4 558 aa14.2□□□□□ -0.14
USH1C-207ENST00000527720 TTC36A6NLP5 189 aa14.2□□□□□ -0.14
USH1C-207ENST00000527720 CTNSO60931 367 aa14.2□□□□□ -0.14
USH1C-207ENST00000527720 CLEC2LP0C7M8 214 aa14.2□□□□□ -0.14
USH1C-207ENST00000527720 CFL1P23528 166 aaKnown RBP14.2□□□□□ -0.14
USH1C-207ENST00000527720 COL13A1Q5TAT6 717 aaPredicted RBP14.2□□□□□ -0.14
USH1C-207ENST00000527720 DGAT2L6Q6ZPD8 337 aa14.2□□□□□ -0.14
USH1C-207ENST00000527720 ZNF595Q8IYB9 648 aa14.2□□□□□ -0.14
USH1C-207ENST00000527720 LSMEM1Q8N8F7 131 aa14.2□□□□□ -0.14
USH1C-207ENST00000527720 GDPD1Q8N9F7 314 aa14.2□□□□□ -0.14
USH1C-207ENST00000527720 DNAJA4Q8WW22 397 aaPredicted RBP14.2□□□□□ -0.14
USH1C-207ENST00000527720 ZNF426Q9BUY5 554 aa14.2□□□□□ -0.14
USH1C-207ENST00000527720 MIXL1Q9H2W2 232 aa14.2□□□□□ -0.14
USH1C-207ENST00000527720 UCK1Q9HA47 277 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms