RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 STXBP1P61764 594 aaKnown RBP4.15□□□□□ -1.75
USP48-211ENST00000526044 VAMP2P63027 116 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 REEP5Q00765 189 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 MC1RQ01726 317 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 FOXM1Q08050 763 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 RGS1Q08116 209 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 TGM3Q08188 693 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 Q0VFX4 171 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 CSTF3Q12996 717 aaKnown RBP4.15□□□□□ -1.75
USP48-211ENST00000526044 DDX39BQ13838 428 aaKnown RBP4.15□□□□□ -1.75
USP48-211ENST00000526044 IL11RAQ14626 422 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 ABRAXAS2Q15018 415 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 ZIC1Q15915 447 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 NDUFA9Q16795 377 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 IMPG1Q17R60 797 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 ISXQ2M1V0 245 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 TCTE1Q5JU00 501 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 FRG2Q64ET8 278 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 CLEC6AQ6EIG7 209 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 FRMPD2BQ6IN97 320 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 CYB5D1Q6P9G0 228 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 EPGNQ6UW88 154 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 IL20RBQ6UXL0 311 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 TRILQ7L0X0 811 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 TMPRSS12Q86WS5 348 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 CSNK1A1LQ8N752 337 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 GBP7Q8N8V2 638 aaPredicted RBP4.15□□□□□ -1.75
USP48-211ENST00000526044 ZNF540Q8NDQ6 660 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 WDR20Q8TBZ3 569 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 ZNF473Q8WTR7 871 aaKnown RBP4.15□□□□□ -1.75
USP48-211ENST00000526044 TWIST2Q8WVJ9 160 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 CNOT9Q92600 299 aaKnown RBP4.15□□□□□ -1.75
USP48-211ENST00000526044 TMEM18Q96B42 140 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 TM4SF19Q96DZ7 209 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 RNF125Q96EQ8 232 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 CHMP6Q96FZ7 201 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 SLC41A2Q96JW4 573 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 PPP1R36Q96LQ0 422 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 ZNF317Q96PQ6 595 aaPredicted RBP4.15□□□□□ -1.75
USP48-211ENST00000526044 OR6C1Q96RD1 312 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 MTERF1Q99551 399 aaKnown RBP4.15□□□□□ -1.75
USP48-211ENST00000526044 SERPINI1Q99574 410 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 CMKLR1Q99788 373 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 CENPKQ9BS16 269 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 SLC7A5P2Q9GIP4 190 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 LHPPQ9H008 270 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 NSRP1Q9H0G5 558 aaKnown RBP4.15□□□□□ -1.75
USP48-211ENST00000526044 SPNS1Q9H2V7 528 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 OR51B5Q9H339 312 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 BRF2Q9HAW0 419 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 FANCEQ9HB96 536 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 FBXO8Q9NRD0 319 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 FGF21Q9NSA1 209 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 FARSBQ9NSD9 589 aaKnown RBP4.15□□□□□ -1.75
USP48-211ENST00000526044 STARD5Q9NSY2 213 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 FGFR1OP2Q9NVK5 253 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 OCIAD1Q9NX40 245 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 ALKBH4Q9NXW9 302 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 COQ3Q9NZJ6 369 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 VPS29Q9UBQ0 182 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 MARCOQ9UEW3 520 aaPredicted RBP4.15□□□□□ -1.75
USP48-211ENST00000526044 BTRCQ9Y297 605 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 DNAJC15Q9Y5T4 150 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 USH1CQ9Y6N9 552 aa4.15□□□□□ -1.75
USP48-211ENST00000526044 SCN3AQ9NY46 2000 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 A0A0G2JND7 137 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 ATP6AP2A0A1C7CYW4 349 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 ARHGAP10A1A4S6 786 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 FAM90A7PA6NKC0 464 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 SRRM3A6NNA2 597 aaPredicted RBP4.14□□□□□ -1.75
USP48-211ENST00000526044 EFCAB7A8K855 629 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 FAM90A22PA8MWA6 464 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 FAM90A12PA8MX19 464 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 FAM90A23PA8MXZ1 464 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 TMEM150CB9EJG8 249 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 SAP18O00422 153 aaKnown RBP4.14□□□□□ -1.75
USP48-211ENST00000526044 ZNF195O14628 629 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 POLR1CO15160 346 aaPredicted RBP4.14□□□□□ -1.75
USP48-211ENST00000526044 NDUFS4O43181 175 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 HCRTR1O43613 425 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 FMO6PO60774 539 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 DIAPH2O60879 1101 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 PEX11AO75192 247 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 SH3BGRLO75368 114 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 CSO75390 466 aaKnown RBP4.14□□□□□ -1.75
USP48-211ENST00000526044 SEC22BO75396 215 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 SLC22A3O75751 556 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 ATP6AP2O75787 350 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 OR2B3O76000 313 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 MYO1DO94832 1006 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 STATHP02808 62 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 SERPINA6P08185 405 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 SLC35G6P0C7Q6 338 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 SMIM10L1P0DMW3 83 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 NR2F1P10589 423 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 CCL4P13236 92 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 NAGAP17050 411 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 GABRA4P48169 554 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 RAP1GDS1P52306 607 aa4.14□□□□□ -1.75
USP48-211ENST00000526044 ARSFP54793 590 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms