RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 FAM122BQ7Z309 247 aa3.06□□□□□ -1.92
CD44-217ENST00000525348 GPR141Q7Z602 305 aa3.06□□□□□ -1.92
CD44-217ENST00000525348 DEFB132Q7Z7B7 95 aa3.06□□□□□ -1.92
CD44-217ENST00000525348 RALGPS2Q86X27 583 aaPredicted RBP3.06□□□□□ -1.92
CD44-217ENST00000525348 TBC1D10CQ8IV04 446 aa3.06□□□□□ -1.92
CD44-217ENST00000525348 LMTK2Q8IWU2 1503 aa3.06□□□□□ -1.92
CD44-217ENST00000525348 ZBED8Q8IZ13 594 aa3.06□□□□□ -1.92
CD44-217ENST00000525348 ZCCHC7Q8N3Z6 543 aaKnown RBP3.06□□□□□ -1.92
CD44-217ENST00000525348 SFRP1Q8N474 314 aa3.06□□□□□ -1.92
CD44-217ENST00000525348 C4orf32Q8N8J7 132 aa3.06□□□□□ -1.92
CD44-217ENST00000525348 CSNK1G2-AS1Q8NCQ2 148 aa3.06□□□□□ -1.92
CD44-217ENST00000525348 OR5M1Q8NGP8 315 aa3.06□□□□□ -1.92
CD44-217ENST00000525348 FIBINQ8TAL6 211 aa3.06□□□□□ -1.92
CD44-217ENST00000525348 CD99L2Q8TCZ2 262 aa3.06□□□□□ -1.92
CD44-217ENST00000525348 RAET1EQ8TD07 263 aa3.06□□□□□ -1.92
CD44-217ENST00000525348 AGAP11Q8TF27 550 aa3.06□□□□□ -1.92
CD44-217ENST00000525348 HEXDCQ8WVB3 486 aa3.06□□□□□ -1.92
CD44-217ENST00000525348 SLC13A3Q8WWT9 602 aa3.06□□□□□ -1.92
CD44-217ENST00000525348 NTAN1Q96AB6 310 aa3.06□□□□□ -1.92
CD44-217ENST00000525348 NABP1Q96AH0 204 aa3.06□□□□□ -1.92
CD44-217ENST00000525348 MRPL38Q96DV4 380 aaKnown RBP3.06□□□□□ -1.92
CD44-217ENST00000525348 NSMCE2Q96MF7 247 aa3.06□□□□□ -1.92
CD44-217ENST00000525348 TAAR6Q96RI8 345 aa3.06□□□□□ -1.92
CD44-217ENST00000525348 CYTH2Q99418 400 aa3.06□□□□□ -1.92
CD44-217ENST00000525348 SPATA16Q9BXB7 569 aa3.06□□□□□ -1.92
CD44-217ENST00000525348 OR51B6Q9H340 312 aa3.06□□□□□ -1.92
CD44-217ENST00000525348 DHX33Q9H6R0 707 aaKnown RBP3.06□□□□□ -1.92
CD44-217ENST00000525348 S100A14Q9HCY8 104 aa3.06□□□□□ -1.92
CD44-217ENST00000525348 PALMDQ9NP74 551 aa3.06□□□□□ -1.92
CD44-217ENST00000525348 MRPS30Q9NP92 439 aaKnown RBP3.06□□□□□ -1.92
CD44-217ENST00000525348 KCNMB3Q9NPA1 279 aa3.06□□□□□ -1.92
CD44-217ENST00000525348 IL26Q9NPH9 171 aa3.06□□□□□ -1.92
CD44-217ENST00000525348 DIABLOQ9NR28 239 aa3.06□□□□□ -1.92
CD44-217ENST00000525348 ELOVL2Q9NXB9 296 aa3.06□□□□□ -1.92
CD44-217ENST00000525348 JCADQ9P266 1359 aa3.06□□□□□ -1.92
CD44-217ENST00000525348 REREQ9P2R6 1566 aa3.06□□□□□ -1.92
CD44-217ENST00000525348 ITGA11Q9UKX5 1188 aa3.06□□□□□ -1.92
CD44-217ENST00000525348 PACSIN2Q9UNF0 486 aaPredicted RBP3.06□□□□□ -1.92
CD44-217ENST00000525348 TDRKHQ9Y2W6 561 aaKnown RBP3.06□□□□□ -1.92
CD44-217ENST00000525348 MRPS2Q9Y399 296 aaKnown RBP3.06□□□□□ -1.92
CD44-217ENST00000525348 SLC22A7Q9Y694 548 aa3.06□□□□□ -1.92
CD44-217ENST00000525348 SHPRHQ149N8 1683 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 DEPDC5O75140 1603 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 SAMD9Q5K651 1589 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 UGGT1Q9NYU2 1555 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 RTL1A6NKG5 1358 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 TNRQ92752 1358 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 CDHR2Q9BYE9 1310 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 TRAV18A0A075B6X5 111 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 IGHV3-16A0A0C4DH30 117 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 ESYT2A0FGR8 921 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 SH3PXD2BA1X283 911 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 EFCAB10A6NFE3 127 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 RPL37AP8A6NKH3 93 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 TRPC5OSA6NMA1 111 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 TMEM150CB9EJG8 249 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 LMO7DNF2Z398 122 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 AQP9O43315 295 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 PFKFB2O60825 505 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 N4BP1O75113 896 aaKnown RBP3.05□□□□□ -1.92
CD44-217ENST00000525348 CLPXO76031 633 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 DHFRP00374 187 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 RENP00797 406 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 FABP1P07148 127 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 KRT16P08779 473 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 CBR1P16152 277 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 CYP2B6P20813 491 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 ATP6V1C1P21283 382 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 CALB2P22676 271 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 TUBG1P23258 451 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 LMO2P25791 158 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 GIFP27352 417 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 G0S2P27469 103 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 PTPN4P29074 926 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 EEF1DP29692 281 aaKnown RBP3.05□□□□□ -1.92
CD44-217ENST00000525348 CASP14P31944 242 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 HMGCLP35914 325 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 NUP62P37198 522 aaPredicted RBP3.05□□□□□ -1.92
CD44-217ENST00000525348 SERPINB9P50453 376 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 BCAP31P51572 246 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 ZNF41P51814 821 aaPredicted RBP3.05□□□□□ -1.92
CD44-217ENST00000525348 RIDAP52758 137 aaKnown RBP3.05□□□□□ -1.92
CD44-217ENST00000525348 AP2S1P53680 142 aaPredicted RBP3.05□□□□□ -1.92
CD44-217ENST00000525348 CDH4P55283 916 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 STX17P56962 302 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 GNG2P59768 71 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 YWHAEP62258 255 aaKnown RBP3.05□□□□□ -1.92
CD44-217ENST00000525348 SRPXP78539 464 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 GLO1Q04760 184 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 CYP24A1Q07973 514 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 NAB1Q13506 487 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 DDX39BQ13838 428 aaKnown RBP3.05□□□□□ -1.92
CD44-217ENST00000525348 MORF4L2Q15014 288 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 KRT31Q15323 416 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 TGFBIQ15582 683 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 UGCGQ16739 394 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 SLC5A12Q1EHB4 618 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 ZNF829Q3KNS6 432 aaPredicted RBP3.05□□□□□ -1.92
CD44-217ENST00000525348 LRRC37A5PQ49AS3 106 aa3.05□□□□□ -1.92
CD44-217ENST00000525348 GPAT3Q53EU6 434 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms