RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 OR6C65A6NJZ3 312 aa2.9□□□□□ -1.95
CD44-215ENST00000525241 ZNF705EA8MWA4 302 aaPredicted RBP2.9□□□□□ -1.95
CD44-215ENST00000525241 F8WDY8 70 aa2.9□□□□□ -1.95
CD44-215ENST00000525241 OR4F21O95013 312 aa2.9□□□□□ -1.95
CD44-215ENST00000525241 OPN1LWP04000 364 aa2.9□□□□□ -1.95
CD44-215ENST00000525241 GCFC2P16383 781 aaKnown RBP2.9□□□□□ -1.95
CD44-215ENST00000525241 FUT3P21217 361 aa2.9□□□□□ -1.95
CD44-215ENST00000525241 MTTPP55157 894 aa2.9□□□□□ -1.95
CD44-215ENST00000525241 PDZK1IP1Q13113 114 aa2.9□□□□□ -1.95
CD44-215ENST00000525241 ATXN7L3Q14CW9 347 aaPredicted RBP2.9□□□□□ -1.95
CD44-215ENST00000525241 HERPUD1Q15011 391 aa2.9□□□□□ -1.95
CD44-215ENST00000525241 TIGITQ495A1 244 aa2.9□□□□□ -1.95
CD44-215ENST00000525241 CELF3Q5SZQ8 465 aaKnown RBP2.9□□□□□ -1.95
CD44-215ENST00000525241 ZNF530Q6P9A1 599 aaPredicted RBP2.9□□□□□ -1.95
CD44-215ENST00000525241 IL34Q6ZMJ4 242 aa2.9□□□□□ -1.95
CD44-215ENST00000525241 CENPUQ71F23 418 aa2.9□□□□□ -1.95
CD44-215ENST00000525241 NANPQ8TBE9 248 aa2.9□□□□□ -1.95
CD44-215ENST00000525241 LINC00167Q96N53 147 aa2.9□□□□□ -1.95
CD44-215ENST00000525241 CITED1Q99966 193 aa2.9□□□□□ -1.95
CD44-215ENST00000525241 MRPL13Q9BYD1 178 aaKnown RBP2.9□□□□□ -1.95
CD44-215ENST00000525241 CHIAQ9BZP6 476 aa2.9□□□□□ -1.95
CD44-215ENST00000525241 WRAP73Q9P2S5 460 aaPredicted RBP2.9□□□□□ -1.95
CD44-215ENST00000525241 XPO7Q9UIA9 1087 aaKnown RBP2.9□□□□□ -1.95
CD44-215ENST00000525241 ODF2LQ9ULJ1 636 aa2.9□□□□□ -1.95
CD44-215ENST00000525241 IGHV1OR15-1A0A075B7D0 117 aa2.89□□□□□ -1.95
CD44-215ENST00000525241 SMIM28A0A1B0GU29 152 aa2.89□□□□□ -1.95
CD44-215ENST00000525241 STX7O15400 261 aaKnown RBP2.89□□□□□ -1.95
CD44-215ENST00000525241 JAK2O60674 1132 aa2.89□□□□□ -1.95
CD44-215ENST00000525241 IGF1P05019 195 aa2.89□□□□□ -1.95
CD44-215ENST00000525241 CLUP10909 449 aa2.89□□□□□ -1.95
CD44-215ENST00000525241 GCKP35557 465 aa2.89□□□□□ -1.95
CD44-215ENST00000525241 MAGEA5P43359 124 aa2.89□□□□□ -1.95
CD44-215ENST00000525241 NAPAP54920 295 aa2.89□□□□□ -1.95
CD44-215ENST00000525241 NDUFA9Q16795 377 aa2.89□□□□□ -1.95
CD44-215ENST00000525241 LRRC8BQ6P9F7 803 aa2.89□□□□□ -1.95
CD44-215ENST00000525241 DNM1P46Q6ZS02 220 aa2.89□□□□□ -1.95
CD44-215ENST00000525241 ZNF589Q86UQ0 364 aaPredicted RBP2.89□□□□□ -1.95
CD44-215ENST00000525241 SKA3Q8IX90 412 aa2.89□□□□□ -1.95
CD44-215ENST00000525241 ZBTB44Q8NCP5 570 aa2.89□□□□□ -1.95
CD44-215ENST00000525241 RNF138Q8WVD3 245 aa2.89□□□□□ -1.95
CD44-215ENST00000525241 SMIM14Q96QK8 99 aa2.89□□□□□ -1.95
CD44-215ENST00000525241 RNF126Q9BV68 326 aa2.89□□□□□ -1.95
CD44-215ENST00000525241 HES7Q9BYE0 225 aa2.89□□□□□ -1.95
CD44-215ENST00000525241 OR51J1Q9H342 316 aa2.89□□□□□ -1.95
CD44-215ENST00000525241 DHX33Q9H6R0 707 aaKnown RBP2.89□□□□□ -1.95
CD44-215ENST00000525241 MARCH5Q9NX47 278 aa2.89□□□□□ -1.95
CD44-215ENST00000525241 WDR45Q9Y484 360 aa2.89□□□□□ -1.95
CD44-215ENST00000525241 MAB21L2Q9Y586 359 aa2.89□□□□□ -1.95
CD44-215ENST00000525241 SPACA6W5XKT8 324 aa2.89□□□□□ -1.95
CD44-215ENST00000525241 CARMIL1Q5VZK9 1371 aa2.88□□□□□ -1.95
CD44-215ENST00000525241 A0A1B0GUL7 405 aa2.88□□□□□ -1.95
CD44-215ENST00000525241 MMP23AO75900 390 aa2.88□□□□□ -1.95
CD44-215ENST00000525241 B3GAT3O94766 335 aa2.88□□□□□ -1.95
CD44-215ENST00000525241 AKR7A3O95154 331 aa2.88□□□□□ -1.95
CD44-215ENST00000525241 IGHV3-48P01763 117 aa2.88□□□□□ -1.95
CD44-215ENST00000525241 SERPINA2P20848 420 aa2.88□□□□□ -1.95
CD44-215ENST00000525241 ORC2Q13416 577 aaPredicted RBP2.88□□□□□ -1.95
CD44-215ENST00000525241 LAGE3Q14657 143 aa2.88□□□□□ -1.95
CD44-215ENST00000525241 CFAP221Q4G0U5 840 aa2.88□□□□□ -1.95
CD44-215ENST00000525241 EOGTQ5NDL2 527 aa2.88□□□□□ -1.95
CD44-215ENST00000525241 C12orf60Q5U649 245 aa2.88□□□□□ -1.95
CD44-215ENST00000525241 SULT1C3Q6IMI6 304 aa2.88□□□□□ -1.95
CD44-215ENST00000525241 CBLN3Q6UW01 205 aa2.88□□□□□ -1.95
CD44-215ENST00000525241 IGFL2Q6UWQ7 119 aa2.88□□□□□ -1.95
CD44-215ENST00000525241 ELSPBP1Q96BH3 223 aa2.88□□□□□ -1.95
CD44-215ENST00000525241 CELF6Q96J87 481 aaKnown RBP2.88□□□□□ -1.95
CD44-215ENST00000525241 OR5B2Q96R09 309 aa2.88□□□□□ -1.95
CD44-215ENST00000525241 CYP2S1Q96SQ9 504 aa2.88□□□□□ -1.95
CD44-215ENST00000525241 MCHR1Q99705 422 aa2.88□□□□□ -1.95
CD44-215ENST00000525241 TXN2Q99757 166 aa2.88□□□□□ -1.95
CD44-215ENST00000525241 GLIPR2Q9H4G4 154 aa2.88□□□□□ -1.95
CD44-215ENST00000525241 CALHM2Q9HA72 323 aa2.88□□□□□ -1.95
CD44-215ENST00000525241 ACTR3BQ9P1U1 418 aa2.88□□□□□ -1.95
CD44-215ENST00000525241 ANGPTL2Q9UKU9 493 aa2.88□□□□□ -1.95
CD44-215ENST00000525241 SMC3Q9UQE7 1217 aa2.88□□□□□ -1.95
CD44-215ENST00000525241 PP2D1A8MPX8 630 aa2.87□□□□□ -1.95
CD44-215ENST00000525241 H3BMQ9 156 aa2.87□□□□□ -1.95
CD44-215ENST00000525241 FCN1O00602 326 aa2.87□□□□□ -1.95
CD44-215ENST00000525241 SCGB2A1O75556 95 aa2.87□□□□□ -1.95
CD44-215ENST00000525241 MBD3O95983 291 aa2.87□□□□□ -1.95
CD44-215ENST00000525241 CYP2F1P24903 491 aa2.87□□□□□ -1.95
CD44-215ENST00000525241 KIF5BP33176 963 aa2.87□□□□□ -1.95
CD44-215ENST00000525241 RBMXP38159 391 aaKnown RBP2.87□□□□□ -1.95
CD44-215ENST00000525241 BTDP43251 543 aa2.87□□□□□ -1.95
CD44-215ENST00000525241 CAV2P51636 162 aa2.87□□□□□ -1.95
CD44-215ENST00000525241 ZNF133P52736 654 aaPredicted RBP2.87□□□□□ -1.95
CD44-215ENST00000525241 RIPPLY1Q0D2K3 151 aa2.87□□□□□ -1.95
CD44-215ENST00000525241 INAQ16352 499 aa2.87□□□□□ -1.95
CD44-215ENST00000525241 MAPK6Q16659 721 aa2.87□□□□□ -1.95
CD44-215ENST00000525241 ASPHD2Q6ICH7 369 aa2.87□□□□□ -1.95
CD44-215ENST00000525241 FAHD2BQ6P2I3 314 aaPredicted RBP2.87□□□□□ -1.95
CD44-215ENST00000525241 ARSKQ6UWY0 536 aa2.87□□□□□ -1.95
CD44-215ENST00000525241 CCDC71LQ8N9Z2 235 aa2.87□□□□□ -1.95
CD44-215ENST00000525241 C7orf33Q8WU49 177 aa2.87□□□□□ -1.95
CD44-215ENST00000525241 ANKRD49Q8WVL7 239 aa2.87□□□□□ -1.95
CD44-215ENST00000525241 TAF4BQ92750 862 aa2.87□□□□□ -1.95
CD44-215ENST00000525241 FAHD2AQ96GK7 314 aa2.87□□□□□ -1.95
CD44-215ENST00000525241 AKR1E2Q96JD6 320 aa2.87□□□□□ -1.95
CD44-215ENST00000525241 DUSP16Q9BY84 665 aa2.87□□□□□ -1.95
CD44-215ENST00000525241 GSDMCQ9BYG8 508 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms