RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 NUDT8Q8WV74 236 aa10.59□□□□□ -0.71
SPARC-206ENST00000524277 FAM120BQ96EK7 910 aaKnown RBP10.59□□□□□ -0.71
SPARC-206ENST00000524277 SMR3AQ99954 134 aa10.59□□□□□ -0.71
SPARC-206ENST00000524277 ACTRT3Q9BYD9 372 aa10.59□□□□□ -0.71
SPARC-206ENST00000524277 L2HGDHQ9H9P8 463 aa10.59□□□□□ -0.71
SPARC-206ENST00000524277 ZCCHC3Q9NUD5 404 aaKnown RBP10.59□□□□□ -0.71
SPARC-206ENST00000524277 ZNF701Q9NV72 531 aaPredicted RBP10.59□□□□□ -0.71
SPARC-206ENST00000524277 MKS1Q9NXB0 559 aa10.59□□□□□ -0.71
SPARC-206ENST00000524277 TRAF6Q9Y4K3 522 aa10.59□□□□□ -0.71
SPARC-206ENST00000524277 GPC6Q9Y625 555 aaPredicted RBP10.59□□□□□ -0.71
SPARC-206ENST00000524277 DSCAMO60469 2012 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 JMJD1CQ15652 2540 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 A0A0J9YW62 118 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 SHISA8B8ZZ34 492 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 H7C1Q1 480 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 TNFSF11O14788 317 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 SCAMP2O15127 329 aaKnown RBP10.58□□□□□ -0.72
SPARC-206ENST00000524277 GMFGO60234 142 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 PRKD3O94806 890 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 LY6G6DO95868 133 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 HMGN2P05204 90 aaKnown RBP10.58□□□□□ -0.72
SPARC-206ENST00000524277 THBDP07204 575 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 LINGO3P0C6S8 592 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 BCKDHAP12694 445 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 AGTR1P30556 359 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 PTH2RP49190 550 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 P2RX1P51575 399 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 GALNTL6Q49A17 601 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 ADAM5Q6NVV9 412 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 CDC73Q6P1J9 531 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 C22orf34Q6ZV56 151 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 DDIASQ8IXT1 998 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 SLC43A2Q8N370 569 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 RIBC1Q8N443 379 aaPredicted RBP10.58□□□□□ -0.72
SPARC-206ENST00000524277 OR2T11Q8NH01 316 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 PHOSPHO1Q8TCT1 267 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 ADAMTS15Q8TE58 950 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 TWIST2Q8WVJ9 160 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 IGFBPL1Q8WX77 278 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 OR5P2Q8WZ92 322 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 HSD17B8Q92506 261 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 JADE3Q92613 823 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 PERPQ96FX8 193 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 CHMP6Q96FZ7 201 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 C16orf58Q96GQ5 468 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 SH3YL1Q96HL8 342 aaPredicted RBP10.58□□□□□ -0.72
SPARC-206ENST00000524277 HS3ST6Q96QI5 342 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 TMEM204Q9BSN7 226 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 ACTR6Q9GZN1 396 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 TUBB1Q9H4B7 451 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 BAIAP2L1Q9UHR4 511 aa10.58□□□□□ -0.72
SPARC-206ENST00000524277 FAF1Q9UNN5 650 aaPredicted RBP10.58□□□□□ -0.72
SPARC-206ENST00000524277 GTPBP1O00178 669 aaKnown RBP10.57□□□□□ -0.72
SPARC-206ENST00000524277 ZNF195O14628 629 aa10.57□□□□□ -0.72
SPARC-206ENST00000524277 HS3ST1O14792 307 aa10.57□□□□□ -0.72
SPARC-206ENST00000524277 EIF4E2O60573 245 aaKnown RBP10.57□□□□□ -0.72
SPARC-206ENST00000524277 SHBGP04278 402 aa10.57□□□□□ -0.72
SPARC-206ENST00000524277 FESP07332 822 aa10.57□□□□□ -0.72
SPARC-206ENST00000524277 CCT3P49368 545 aaKnown RBP10.57□□□□□ -0.72
SPARC-206ENST00000524277 ATP12AP54707 1039 aa10.57□□□□□ -0.72
SPARC-206ENST00000524277 PPP2R2BQ00005 443 aa10.57□□□□□ -0.72
SPARC-206ENST00000524277 TP53BP2Q13625 1128 aa10.57□□□□□ -0.72
SPARC-206ENST00000524277 LASP1Q14847 261 aaKnown RBP10.57□□□□□ -0.72
SPARC-206ENST00000524277 PCLAFQ15004 111 aa10.57□□□□□ -0.72
SPARC-206ENST00000524277 P2RY6Q15077 328 aa10.57□□□□□ -0.72
SPARC-206ENST00000524277 ETFDHQ16134 617 aa10.57□□□□□ -0.72
SPARC-206ENST00000524277 ZNF239Q16600 458 aaKnown RBP10.57□□□□□ -0.72
SPARC-206ENST00000524277 UGT3A2Q3SY77 523 aa10.57□□□□□ -0.72
SPARC-206ENST00000524277 ATP6AP1LQ52LC2 224 aa10.57□□□□□ -0.72
SPARC-206ENST00000524277 KLHL26Q53HC5 615 aa10.57□□□□□ -0.72
SPARC-206ENST00000524277 Q71RC1 249 aaPredicted RBP10.57□□□□□ -0.72
SPARC-206ENST00000524277 C4orf33Q8N1A6 199 aa10.57□□□□□ -0.72
SPARC-206ENST00000524277 GATSQ8NAP1 163 aa10.57□□□□□ -0.72
SPARC-206ENST00000524277 TOR1AIP2Q8NFQ8 470 aa10.57□□□□□ -0.72
SPARC-206ENST00000524277 CLHC1Q8NHS4 586 aa10.57□□□□□ -0.72
SPARC-206ENST00000524277 POC1BQ8TC44 478 aa10.57□□□□□ -0.72
SPARC-206ENST00000524277 SFXN5Q8TD22 340 aa10.57□□□□□ -0.72
SPARC-206ENST00000524277 RNF128Q8TEB7 428 aa10.57□□□□□ -0.72
SPARC-206ENST00000524277 COQ8BQ96D53 544 aa10.57□□□□□ -0.72
SPARC-206ENST00000524277 PLPPR2Q96GM1 343 aa10.57□□□□□ -0.72
SPARC-206ENST00000524277 MRGPRX4Q96LA9 322 aa10.57□□□□□ -0.72
SPARC-206ENST00000524277 SIRT3Q9NTG7 399 aaPredicted RBP10.57□□□□□ -0.72
SPARC-206ENST00000524277 CLEC4AQ9UMR7 237 aa10.57□□□□□ -0.72
SPARC-206ENST00000524277 FIS1Q9Y3D6 152 aa10.57□□□□□ -0.72
SPARC-206ENST00000524277 PTGDR2Q9Y5Y4 395 aa10.57□□□□□ -0.72
SPARC-206ENST00000524277 TLN2Q9Y4G6 2542 aa10.57□□□□□ -0.72
SPARC-206ENST00000524277 CSPG4Q6UVK1 2322 aa10.57□□□□□ -0.72
SPARC-206ENST00000524277 SMIM23A6NLE4 172 aa10.56□□□□□ -0.72
SPARC-206ENST00000524277 DUXAA6NLW8 204 aa10.56□□□□□ -0.72
SPARC-206ENST00000524277 PIP5K1BO14986 540 aa10.56□□□□□ -0.72
SPARC-206ENST00000524277 CNOT4O95628 575 aaKnown RBP10.56□□□□□ -0.72
SPARC-206ENST00000524277 NUDT14O95848 222 aa10.56□□□□□ -0.72
SPARC-206ENST00000524277 AK1P00568 194 aa10.56□□□□□ -0.72
SPARC-206ENST00000524277 YES1P07947 543 aa10.56□□□□□ -0.72
SPARC-206ENST00000524277 NID1P14543 1247 aa10.56□□□□□ -0.72
SPARC-206ENST00000524277 PRPS1L1P21108 318 aa10.56□□□□□ -0.72
SPARC-206ENST00000524277 RAC3P60763 192 aa10.56□□□□□ -0.72
SPARC-206ENST00000524277 ZNF117Q03924 483 aa10.56□□□□□ -0.72
SPARC-206ENST00000524277 MAD2L1Q13257 205 aaPredicted RBP10.56□□□□□ -0.72
SPARC-206ENST00000524277 CD226Q15762 336 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms