RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 CLEC4AQ9UMR7 237 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 GPR52Q9Y2T5 361 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 RNF11Q9Y3C5 154 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 MRPS18CQ9Y3D5 142 aaKnown RBP5.58□□□□□ -1.52
PABPC1-220ENST00000522658 PCDHA9Q9Y5H5 950 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 AP4B1Q9Y6B7 739 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 HRNRQ86YZ3 2850 aaPredicted RBP5.58□□□□□ -1.52
PABPC1-220ENST00000522658 A0A1W2PS29 197 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 TCRBV9S1A1TA0A576 114 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 CCDC151A5D8V7 595 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 LRRC14BA6NHZ5 514 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 TO15178 435 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 OTCP00480 354 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 PAX1P15863 534 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 SRD5A1P18405 259 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 TYK2P29597 1187 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 HMOX2P30519 316 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 SSTR1P30872 391 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 MPIP34949 423 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 ACVR1BP36896 505 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 PTGDSP41222 190 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 SERPINB8P50452 374 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 RPL11P62913 178 aaKnown RBP5.57□□□□□ -1.52
PABPC1-220ENST00000522658 TRA2BP62995 288 aaKnown RBP5.57□□□□□ -1.52
PABPC1-220ENST00000522658 ACSM2AQ08AH3 577 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 LTB4RQ15722 352 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 TRMT12Q53H54 448 aaKnown RBP5.57□□□□□ -1.52
PABPC1-220ENST00000522658 ACSM2BQ68CK6 577 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 ISCA2Q86U28 154 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 HIPK1Q86Z02 1210 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 WDR75Q8IWA0 830 aaKnown RBP5.57□□□□□ -1.52
PABPC1-220ENST00000522658 LRRC8AQ8IWT6 810 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 ZNF619Q8N2I2 560 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 METTL4Q8N3J2 472 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 MMGT1Q8N4V1 131 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 PTGR2Q8N8N7 351 aaPredicted RBP5.57□□□□□ -1.52
PABPC1-220ENST00000522658 CDYL2Q8N8U2 506 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 BANPQ8N9N5 519 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 L3MBTL4Q8NA19 623 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 OR9A2Q8NGT5 310 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 OR2W6PQ8NHA6 318 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 TRPC4APQ8TEL6 797 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 SMAP2Q8WU79 429 aaPredicted RBP5.57□□□□□ -1.52
PABPC1-220ENST00000522658 KCTD4Q8WVF5 259 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 KAT2AQ92830 837 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 KISS1RQ969F8 398 aaPredicted RBP5.57□□□□□ -1.52
PABPC1-220ENST00000522658 NXNL1Q96CM4 212 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 MUCL1Q96DR8 90 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 MRRFQ96E11 262 aaKnown RBP5.57□□□□□ -1.52
PABPC1-220ENST00000522658 CHMP6Q96FZ7 201 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 UBXN10Q96LJ8 280 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 HDHD5Q9BXW7 423 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 ZNF717Q9BY31 904 aaPredicted RBP5.57□□□□□ -1.52
PABPC1-220ENST00000522658 IQCGQ9H095 443 aaKnown RBP5.57□□□□□ -1.52
PABPC1-220ENST00000522658 VPS11Q9H270 941 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 DPH5Q9H2P9 285 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 SLCO5A1Q9H2Y9 848 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 LRTM1Q9HBL6 345 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 ZBTB26Q9HCK0 441 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 MIEF1Q9NQG6 463 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 DDX18Q9NVP1 670 aaKnown RBP5.57□□□□□ -1.52
PABPC1-220ENST00000522658 MED11Q9P086 117 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 FBXL7Q9UJT9 491 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 KCNS2Q9ULS6 477 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 LIPT1Q9Y234 373 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 VDAC3Q9Y277 283 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 SNX24Q9Y343 169 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 UTP11Q9Y3A2 253 aaKnown RBP5.57□□□□□ -1.52
PABPC1-220ENST00000522658 MAGED1Q9Y5V3 778 aaPredicted RBP5.57□□□□□ -1.52
PABPC1-220ENST00000522658 JMJD1CQ15652 2540 aa5.57□□□□□ -1.52
PABPC1-220ENST00000522658 A0A087WZY1 265 aa5.56□□□□□ -1.52
PABPC1-220ENST00000522658 OR2M5A3KFT3 312 aa5.56□□□□□ -1.52
PABPC1-220ENST00000522658 FAM159BA6NKW6 160 aa5.56□□□□□ -1.52
PABPC1-220ENST00000522658 GJE1A6NN92 205 aa5.56□□□□□ -1.52
PABPC1-220ENST00000522658 CXorf49A8MYA2 514 aaPredicted RBP5.56□□□□□ -1.52
PABPC1-220ENST00000522658 E7ESA3 106 aa5.56□□□□□ -1.52
PABPC1-220ENST00000522658 SSX4O60224 188 aa5.56□□□□□ -1.52
PABPC1-220ENST00000522658 PCDH7O60245 1069 aa5.56□□□□□ -1.52
PABPC1-220ENST00000522658 TSPAN2O60636 221 aa5.56□□□□□ -1.52
PABPC1-220ENST00000522658 SS18L1O75177 396 aaPredicted RBP5.56□□□□□ -1.52
PABPC1-220ENST00000522658 KLHL2O95198 593 aa5.56□□□□□ -1.52
PABPC1-220ENST00000522658 SIX3O95343 332 aaPredicted RBP5.56□□□□□ -1.52
PABPC1-220ENST00000522658 WISP3O95389 354 aaPredicted RBP5.56□□□□□ -1.52
PABPC1-220ENST00000522658 IL33O95760 270 aa5.56□□□□□ -1.52
PABPC1-220ENST00000522658 NUDT14O95848 222 aa5.56□□□□□ -1.52
PABPC1-220ENST00000522658 PLAUP00749 431 aa5.56□□□□□ -1.52
PABPC1-220ENST00000522658 KRT6AP02538 564 aa5.56□□□□□ -1.52
PABPC1-220ENST00000522658 SLPIP03973 132 aa5.56□□□□□ -1.52
PABPC1-220ENST00000522658 KRT6BP04259 564 aa5.56□□□□□ -1.52
PABPC1-220ENST00000522658 IL3P08700 152 aa5.56□□□□□ -1.52
PABPC1-220ENST00000522658 RBP1P09455 135 aa5.56□□□□□ -1.52
PABPC1-220ENST00000522658 ZNF17P17021 662 aa5.56□□□□□ -1.52
PABPC1-220ENST00000522658 PSMB1P20618 241 aaKnown RBP5.56□□□□□ -1.52
PABPC1-220ENST00000522658 PHBP35232 272 aa5.56□□□□□ -1.52
PABPC1-220ENST00000522658 KRT6CP48668 564 aa5.56□□□□□ -1.52
PABPC1-220ENST00000522658 EMDP50402 254 aa5.56□□□□□ -1.52
PABPC1-220ENST00000522658 NCBP2P52298 156 aaKnown RBP eCLIP5.56□□□□□ -1.52
PABPC1-220ENST00000522658 CLDN20P56880 219 aa5.56□□□□□ -1.52
PABPC1-220ENST00000522658 DSCR9P59020 149 aa5.56□□□□□ -1.52
PABPC1-220ENST00000522658 C17orf67Q0P5P2 114 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms