RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 CLCF1Q9UBD9 225 aa16.12■□□□□ 0.17
CLK4-211ENST00000522556 L3MBTL1Q9Y468 752 aa16.12■□□□□ 0.17
CLK4-211ENST00000522556 DTNAQ9Y4J8 743 aa16.12■□□□□ 0.17
CLK4-211ENST00000522556 CACNA1DQ01668 2161 aa16.11■□□□□ 0.17
CLK4-211ENST00000522556 INTS1Q8N201 2190 aaKnown RBP16.11■□□□□ 0.17
CLK4-211ENST00000522556 MBD3L4A6NDZ8 208 aaPredicted RBP16.11■□□□□ 0.17
CLK4-211ENST00000522556 MBD3L3A6NE82 208 aaPredicted RBP16.11■□□□□ 0.17
CLK4-211ENST00000522556 MBD3L5A6NJ08 208 aaPredicted RBP16.11■□□□□ 0.17
CLK4-211ENST00000522556 DUXAA6NLW8 204 aa16.11■□□□□ 0.17
CLK4-211ENST00000522556 STX11O75558 287 aa16.11■□□□□ 0.17
CLK4-211ENST00000522556 H6PDO95479 791 aa16.11■□□□□ 0.17
CLK4-211ENST00000522556 TGM6O95932 706 aa16.11■□□□□ 0.17
CLK4-211ENST00000522556 ETFAP13804 333 aa16.11■□□□□ 0.17
CLK4-211ENST00000522556 PSMA4P25789 261 aaKnown RBP16.11■□□□□ 0.17
CLK4-211ENST00000522556 SHC1P29353 583 aa16.11■□□□□ 0.17
CLK4-211ENST00000522556 PTGER4P35408 488 aa16.11■□□□□ 0.17
CLK4-211ENST00000522556 GCKP35557 465 aa16.11■□□□□ 0.17
CLK4-211ENST00000522556 STX1BP61266 288 aa16.11■□□□□ 0.17
CLK4-211ENST00000522556 CHRNEQ04844 493 aa16.11■□□□□ 0.17
CLK4-211ENST00000522556 FOXF1Q12946 379 aa16.11■□□□□ 0.17
CLK4-211ENST00000522556 FOXF2Q12947 444 aa16.11■□□□□ 0.17
CLK4-211ENST00000522556 PAGE3Q5JUK9 113 aa16.11■□□□□ 0.17
CLK4-211ENST00000522556 C6orf10Q5SRN2 563 aa16.11■□□□□ 0.17
CLK4-211ENST00000522556 LACC1Q8IV20 430 aa16.11■□□□□ 0.17
CLK4-211ENST00000522556 MSRB3Q8IXL7 192 aa16.11■□□□□ 0.17
CLK4-211ENST00000522556 MBD3L2Q8NHZ7 208 aaPredicted RBP16.11■□□□□ 0.17
CLK4-211ENST00000522556 ZPLD1Q8TCW7 415 aa16.11■□□□□ 0.17
CLK4-211ENST00000522556 ASB5Q8WWX0 329 aa16.11■□□□□ 0.17
CLK4-211ENST00000522556 ZNF845Q96IR2 970 aaPredicted RBP16.11■□□□□ 0.17
CLK4-211ENST00000522556 RNF145Q96MT1 663 aa16.11■□□□□ 0.17
CLK4-211ENST00000522556 NMUR2Q9GZQ4 415 aa16.11■□□□□ 0.17
CLK4-211ENST00000522556 TMEM185BQ9H7F4 350 aa16.11■□□□□ 0.17
CLK4-211ENST00000522556 FGFR1OP2Q9NVK5 253 aa16.11■□□□□ 0.17
CLK4-211ENST00000522556 SLC25A37Q9NYZ2 338 aa16.11■□□□□ 0.17
CLK4-211ENST00000522556 ICAM5Q9UMF0 924 aa16.11■□□□□ 0.17
CLK4-211ENST00000522556 WDR45Q9Y484 360 aa16.11■□□□□ 0.17
CLK4-211ENST00000522556 CELSR2Q9HCU4 2923 aa16.1■□□□□ 0.17
CLK4-211ENST00000522556 ADGRG4Q8IZF6 3080 aa16.1■□□□□ 0.17
CLK4-211ENST00000522556 A0A0G2JND7 137 aa16.1■□□□□ 0.17
CLK4-211ENST00000522556 SERINC4A6NH21 518 aa16.1■□□□□ 0.17
CLK4-211ENST00000522556 CD8B2A6NJW9 211 aa16.1■□□□□ 0.17
CLK4-211ENST00000522556 EFNA2O43921 213 aa16.1■□□□□ 0.17
CLK4-211ENST00000522556 AK1P00568 194 aa16.1■□□□□ 0.17
CLK4-211ENST00000522556 HOXD4P09016 255 aaPredicted RBP16.1■□□□□ 0.17
CLK4-211ENST00000522556 LINGO3P0C6S8 592 aa16.1■□□□□ 0.17
CLK4-211ENST00000522556 SNTB1Q13884 538 aaKnown RBP16.1■□□□□ 0.17
CLK4-211ENST00000522556 ZNF141Q15928 474 aa16.1■□□□□ 0.17
CLK4-211ENST00000522556 GPAT3Q53EU6 434 aa16.1■□□□□ 0.17
CLK4-211ENST00000522556 AGKQ53H12 422 aa16.1■□□□□ 0.17
CLK4-211ENST00000522556 BLOC1S3Q6QNY0 202 aa16.1■□□□□ 0.17
CLK4-211ENST00000522556 GGNQ86UU5 652 aa16.1■□□□□ 0.17
CLK4-211ENST00000522556 GCNT2Q8N0V5 402 aa16.1■□□□□ 0.17
CLK4-211ENST00000522556 C10orf111Q8N326 155 aa16.1■□□□□ 0.17
CLK4-211ENST00000522556 TRIML2Q8N7C3 387 aa16.1■□□□□ 0.17
CLK4-211ENST00000522556 ZNF527Q8NB42 609 aa16.1■□□□□ 0.17
CLK4-211ENST00000522556 MARVELD3Q96A59 401 aa16.1■□□□□ 0.17
CLK4-211ENST00000522556 ITCHQ96J02 903 aa16.1■□□□□ 0.17
CLK4-211ENST00000522556 SLC38A1Q9H2H9 487 aa16.1■□□□□ 0.17
CLK4-211ENST00000522556 EXD2Q9NVH0 621 aa16.1■□□□□ 0.17
CLK4-211ENST00000522556 PCDHB14Q9Y5E9 798 aa16.1■□□□□ 0.17
CLK4-211ENST00000522556 PKDREJQ9NTG1 2253 aa16.1■□□□□ 0.17
CLK4-211ENST00000522556 ADAM11O75078 769 aa16.09■□□□□ 0.17
CLK4-211ENST00000522556 NUDT7P0C024 238 aa16.09■□□□□ 0.17
CLK4-211ENST00000522556 ZCCHC18P0CG32 403 aa16.09■□□□□ 0.17
CLK4-211ENST00000522556 UBL4AP11441 157 aa16.09■□□□□ 0.17
CLK4-211ENST00000522556 BMP5P22003 454 aa16.09■□□□□ 0.17
CLK4-211ENST00000522556 CCR4P51679 360 aa16.09■□□□□ 0.17
CLK4-211ENST00000522556 SKP2Q13309 424 aa16.09■□□□□ 0.17
CLK4-211ENST00000522556 SQLEQ14534 574 aa16.09■□□□□ 0.17
CLK4-211ENST00000522556 RPS26P11Q5JNZ5 115 aaPredicted RBP16.09■□□□□ 0.17
CLK4-211ENST00000522556 ATAD3BQ5T9A4 648 aa16.09■□□□□ 0.17
CLK4-211ENST00000522556 MSANTD1Q6ZTZ1 278 aa16.09■□□□□ 0.17
CLK4-211ENST00000522556 MISPQ8IVT2 679 aa16.09■□□□□ 0.17
CLK4-211ENST00000522556 ZNF619Q8N2I2 560 aa16.09■□□□□ 0.17
CLK4-211ENST00000522556 GTPBP8Q8N3Z3 284 aaPredicted RBP16.09■□□□□ 0.17
CLK4-211ENST00000522556 TMCO5AQ8N6Q1 288 aa16.09■□□□□ 0.17
CLK4-211ENST00000522556 ACBD4Q8NC06 268 aa16.09■□□□□ 0.17
CLK4-211ENST00000522556 FIG4Q92562 907 aa16.09■□□□□ 0.17
CLK4-211ENST00000522556 SPDL1Q96EA4 605 aa16.09■□□□□ 0.17
CLK4-211ENST00000522556 PIGQQ9BRB3 760 aa16.09■□□□□ 0.17
CLK4-211ENST00000522556 TMEM120AQ9BXJ8 343 aa16.09■□□□□ 0.17
CLK4-211ENST00000522556 HOXD1Q9GZZ0 328 aa16.09■□□□□ 0.17
CLK4-211ENST00000522556 SAP130Q9H0E3 1048 aa16.09■□□□□ 0.17
CLK4-211ENST00000522556 TPT1P8Q9HAU6 139 aa16.09■□□□□ 0.17
CLK4-211ENST00000522556 FBN2P35556 2912 aa16.08■□□□□ 0.16
CLK4-211ENST00000522556 GTPBP1O00178 669 aaKnown RBP16.08■□□□□ 0.16
CLK4-211ENST00000522556 CYP7B1O75881 506 aa16.08■□□□□ 0.16
CLK4-211ENST00000522556 ANP32DO95626 131 aa16.08■□□□□ 0.16
CLK4-211ENST00000522556 NUDT14O95848 222 aa16.08■□□□□ 0.16
CLK4-211ENST00000522556 UBTFL6P0CB48 400 aaPredicted RBP16.08■□□□□ 0.16
CLK4-211ENST00000522556 PEPDP12955 493 aa16.08■□□□□ 0.16
CLK4-211ENST00000522556 NCF2P19878 526 aaPredicted RBP16.08■□□□□ 0.16
CLK4-211ENST00000522556 MSX1P28360 303 aa16.08■□□□□ 0.16
CLK4-211ENST00000522556 TIMP3P35625 211 aa16.08■□□□□ 0.16
CLK4-211ENST00000522556 ATP4BP51164 291 aa16.08■□□□□ 0.16
CLK4-211ENST00000522556 P2RX1P51575 399 aa16.08■□□□□ 0.16
CLK4-211ENST00000522556 ZNF41P51814 821 aaPredicted RBP16.08■□□□□ 0.16
CLK4-211ENST00000522556 LRRC74AQ0VAA2 488 aa16.08■□□□□ 0.16
CLK4-211ENST00000522556 FGFBP1Q14512 234 aa16.08■□□□□ 0.16
CLK4-211ENST00000522556 CTU2Q2VPK5 515 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms