RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 STEAP2Q8NFT2 490 aa18.61■□□□□ 0.57
PABPC1-218ENST00000521865 CDS1Q92903 461 aa18.61■□□□□ 0.57
PABPC1-218ENST00000521865 MTERF3Q96E29 417 aa18.61■□□□□ 0.57
PABPC1-218ENST00000521865 FAM120BQ96EK7 910 aaKnown RBP18.61■□□□□ 0.57
PABPC1-218ENST00000521865 KLHDC3Q9BQ90 382 aa18.61■□□□□ 0.57
PABPC1-218ENST00000521865 TRMOQ9BU70 441 aa18.61■□□□□ 0.57
PABPC1-218ENST00000521865 GATA5Q9BWX5 397 aaPredicted RBP18.61■□□□□ 0.57
PABPC1-218ENST00000521865 BTBD2Q9BX70 525 aa18.61■□□□□ 0.57
PABPC1-218ENST00000521865 TUBB1Q9H4B7 451 aa18.61■□□□□ 0.57
PABPC1-218ENST00000521865 DNAJC15Q9Y5T4 150 aa18.61■□□□□ 0.57
PABPC1-218ENST00000521865 TMEM114B3SHH9 223 aa18.6■□□□□ 0.57
PABPC1-218ENST00000521865 INAFM1C9JVW0 142 aa18.6■□□□□ 0.57
PABPC1-218ENST00000521865 H3BNH8 94 aa18.6■□□□□ 0.57
PABPC1-218ENST00000521865 HS3ST1O14792 307 aa18.6■□□□□ 0.57
PABPC1-218ENST00000521865 LSM1O15116 133 aaKnown RBP18.6■□□□□ 0.57
PABPC1-218ENST00000521865 TRIM13O60858 407 aa18.6■□□□□ 0.57
PABPC1-218ENST00000521865 BCKDHAP12694 445 aa18.6■□□□□ 0.57
PABPC1-218ENST00000521865 PSMB1P20618 241 aaKnown RBP18.6■□□□□ 0.57
PABPC1-218ENST00000521865 ATP5J2P56134 94 aa18.6■□□□□ 0.57
PABPC1-218ENST00000521865 ZNF117Q03924 483 aa18.6■□□□□ 0.57
PABPC1-218ENST00000521865 PCLAFQ15004 111 aa18.6■□□□□ 0.57
PABPC1-218ENST00000521865 ZNF239Q16600 458 aaKnown RBP18.6■□□□□ 0.57
PABPC1-218ENST00000521865 SPDYE7PQ495Y7 208 aa18.6■□□□□ 0.57
PABPC1-218ENST00000521865 KANK2Q63ZY3 851 aa18.6■□□□□ 0.57
PABPC1-218ENST00000521865 LRIG3Q6UXM1 1119 aa18.6■□□□□ 0.57
PABPC1-218ENST00000521865 ZNF611Q8N823 705 aa18.6■□□□□ 0.57
PABPC1-218ENST00000521865 ZNF527Q8NB42 609 aa18.6■□□□□ 0.57
PABPC1-218ENST00000521865 ATP6V1C2Q8NEY4 427 aa18.6■□□□□ 0.57
PABPC1-218ENST00000521865 EPS8L3Q8TE67 593 aaKnown RBP18.6■□□□□ 0.57
PABPC1-218ENST00000521865 ABHD3Q8WU67 409 aa18.6■□□□□ 0.57
PABPC1-218ENST00000521865 TWIST2Q8WVJ9 160 aa18.6■□□□□ 0.57
PABPC1-218ENST00000521865 AKAP1Q92667 903 aaKnown RBP eCLIP18.6■□□□□ 0.579e-8■■□□□ 13.6
PABPC1-218ENST00000521865 CPNE4Q96A23 557 aaPredicted RBP18.6■□□□□ 0.57
PABPC1-218ENST00000521865 S100PBPQ96BU1 408 aa18.6■□□□□ 0.57
PABPC1-218ENST00000521865 OR10A4Q9H209 315 aa18.6■□□□□ 0.57
PABPC1-218ENST00000521865 PPCSQ9HAB8 311 aa18.6■□□□□ 0.57
PABPC1-218ENST00000521865 LAMP3Q9UQV4 416 aa18.6■□□□□ 0.57
PABPC1-218ENST00000521865 ARID1AO14497 2285 aa18.6■□□□□ 0.57
PABPC1-218ENST00000521865 FN1P02751 2386 aaKnown RBP18.59■□□□□ 0.57
PABPC1-218ENST00000521865 GJE1A6NN92 205 aa18.59■□□□□ 0.57
PABPC1-218ENST00000521865 CLOCKO15516 846 aa18.59■□□□□ 0.57
PABPC1-218ENST00000521865 LINGO3P0C6S8 592 aa18.59■□□□□ 0.57
PABPC1-218ENST00000521865 IL32P24001 234 aa18.59■□□□□ 0.57
PABPC1-218ENST00000521865 ELK4P28324 431 aa18.59■□□□□ 0.57
PABPC1-218ENST00000521865 MAPK1P28482 360 aa18.59■□□□□ 0.57
PABPC1-218ENST00000521865 TP53BP2Q13625 1128 aa18.59■□□□□ 0.57
PABPC1-218ENST00000521865 RNPS1Q15287 305 aaKnown RBP18.59■□□□□ 0.57
PABPC1-218ENST00000521865 RNF165Q6ZSG1 346 aa18.59■□□□□ 0.57
PABPC1-218ENST00000521865 MTERF4Q7Z6M4 381 aaKnown RBP18.59■□□□□ 0.57
PABPC1-218ENST00000521865 TDRPQ86YL5 185 aa18.59■□□□□ 0.57
PABPC1-218ENST00000521865 ZNF614Q8N883 585 aa18.59■□□□□ 0.57
PABPC1-218ENST00000521865 FBXO27Q8NI29 283 aa18.59■□□□□ 0.57
PABPC1-218ENST00000521865 ADAMTS15Q8TE58 950 aa18.59■□□□□ 0.57
PABPC1-218ENST00000521865 RNF128Q8TEB7 428 aa18.59■□□□□ 0.57
PABPC1-218ENST00000521865 STACQ99469 402 aa18.59■□□□□ 0.57
PABPC1-218ENST00000521865 PIGUQ9H490 435 aa18.59■□□□□ 0.57
PABPC1-218ENST00000521865 DUSP22Q9NRW4 184 aa18.59■□□□□ 0.57
PABPC1-218ENST00000521865 FAF1Q9UNN5 650 aaPredicted RBP18.59■□□□□ 0.57
PABPC1-218ENST00000521865 NPIPA5A0A0B4J1W7 369 aa18.58■□□□□ 0.56
PABPC1-218ENST00000521865 TMEM233B4DJY2 109 aa18.58■□□□□ 0.56
PABPC1-218ENST00000521865 NPIPA7E9PJI5 369 aa18.58■□□□□ 0.56
PABPC1-218ENST00000521865 GTPBP1O00178 669 aaKnown RBP18.58■□□□□ 0.56
PABPC1-218ENST00000521865 ZNF195O14628 629 aa18.58■□□□□ 0.56
PABPC1-218ENST00000521865 PIP5K1BO14986 540 aa18.58■□□□□ 0.56
PABPC1-218ENST00000521865 SCAMP2O15127 329 aaKnown RBP18.58■□□□□ 0.56
PABPC1-218ENST00000521865 TMCC2O75069 709 aa18.58■□□□□ 0.56
PABPC1-218ENST00000521865 NTN1O95631 604 aa18.58■□□□□ 0.56
PABPC1-218ENST00000521865 NPIPA8P0DM63 369 aa18.58■□□□□ 0.56
PABPC1-218ENST00000521865 SHC1P29353 583 aa18.58■□□□□ 0.56
PABPC1-218ENST00000521865 RPL3P39023 403 aaKnown RBP18.58■□□□□ 0.56
PABPC1-218ENST00000521865 RPS4XP62701 263 aaKnown RBP18.58■□□□□ 0.56
PABPC1-218ENST00000521865 CAPRIN1Q14444 709 aaKnown RBP18.58■□□□□ 0.56
PABPC1-218ENST00000521865 MLC1Q15049 377 aa18.58■□□□□ 0.56
PABPC1-218ENST00000521865 TSC22D1Q15714 1073 aa18.58■□□□□ 0.56
PABPC1-218ENST00000521865 TMEM176BQ3YBM2 270 aaPredicted RBP18.58■□□□□ 0.56
PABPC1-218ENST00000521865 PRIMA1Q86XR5 153 aa18.58■□□□□ 0.56
PABPC1-218ENST00000521865 HOMEZQ8IX15 550 aa18.58■□□□□ 0.56
PABPC1-218ENST00000521865 TUSC5Q8IXB3 177 aa18.58■□□□□ 0.56
PABPC1-218ENST00000521865 ZNF619Q8N2I2 560 aa18.58■□□□□ 0.56
PABPC1-218ENST00000521865 OR7A2PQ8NGA2 310 aa18.58■□□□□ 0.56
PABPC1-218ENST00000521865 AGR3Q8TD06 166 aa18.58■□□□□ 0.56
PABPC1-218ENST00000521865 HDHD5Q9BXW7 423 aa18.58■□□□□ 0.56
PABPC1-218ENST00000521865 SRXN1Q9BYN0 137 aa18.58■□□□□ 0.56
PABPC1-218ENST00000521865 HOXD1Q9GZZ0 328 aa18.58■□□□□ 0.56
PABPC1-218ENST00000521865 EML4Q9HC35 981 aaKnown RBP18.58■□□□□ 0.56
PABPC1-218ENST00000521865 NGBQ9NPG2 151 aa18.58■□□□□ 0.56
PABPC1-218ENST00000521865 SIRT3Q9NTG7 399 aaPredicted RBP18.58■□□□□ 0.56
PABPC1-218ENST00000521865 ZNF701Q9NV72 531 aaPredicted RBP18.58■□□□□ 0.56
PABPC1-218ENST00000521865 ATP6V1HQ9UI12 483 aa18.58■□□□□ 0.56
PABPC1-218ENST00000521865 CARD8Q9Y2G2 431 aa18.58■□□□□ 0.56
PABPC1-218ENST00000521865 TRAF6Q9Y4K3 522 aa18.58■□□□□ 0.56
PABPC1-218ENST00000521865 DNHD1Q96M86 4753 aa18.58■□□□□ 0.56
PABPC1-218ENST00000521865 CHRNGP07510 517 aa18.57■□□□□ 0.56
PABPC1-218ENST00000521865 CCT3P49368 545 aaKnown RBP18.57■□□□□ 0.56
PABPC1-218ENST00000521865 P2RX1P51575 399 aa18.57■□□□□ 0.56
PABPC1-218ENST00000521865 ZNF844Q08AG5 666 aa18.57■□□□□ 0.56
PABPC1-218ENST00000521865 DCST2Q5T1A1 773 aa18.57■□□□□ 0.56
PABPC1-218ENST00000521865 CDC73Q6P1J9 531 aa18.57■□□□□ 0.56
PABPC1-218ENST00000521865 CBLN3Q6UW01 205 aa18.57■□□□□ 0.56
PABPC1-218ENST00000521865 TFAP2EQ6VUC0 442 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms