RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 HPP00738 406 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 CA1P00915 261 aaPredicted RBP2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 HOXD4P09016 255 aaPredicted RBP2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 HBQ1P09105 142 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 ZNF44P15621 663 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 LAP3P28838 519 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 UGT1A5P35504 534 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 EMDP50402 254 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 ARHGDIAP52565 204 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 SLC7A2P52569 658 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 AIF1P55008 147 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 ERVK11-1P61568 191 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 NUCB2P80303 420 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 LAGE3Q14657 143 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 TMEM44Q2T9K0 475 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 CFAP221Q4G0U5 840 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 GPRIN3Q6ZVF9 776 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 LRRC70Q7Z2Q7 622 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 LCA5Q86VQ0 697 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 SERPINA9Q86WD7 417 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 LRRC49Q8IUZ0 686 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 TMEM123Q8N131 208 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 SYT14Q8NB59 555 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 OR4D5Q8NGN0 318 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 OR6T1Q8NGN1 323 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 OR4Q3Q8NH05 313 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 RNF139Q8WU17 664 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 ITLN1Q8WWA0 313 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 MYLPFQ96A32 169 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 ELMO2Q96JJ3 720 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 C12orf66Q96MD2 445 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 MTMR9Q96QG7 549 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 HCAR1Q9BXC0 346 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 ADNPQ9H2P0 1102 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 HEXA-AS1Q9H8Q6 139 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 LRRC40Q9H9A6 602 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 ABCC13Q9NSE7 274 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 TXLNGQ9NUQ3 528 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 EHFQ9NZC4 300 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 RAI14Q9P0K7 980 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 COX16Q9P0S2 106 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 RNF14Q9UBS8 474 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 MGAT4AQ9UM21 535 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 NTNG1Q9Y2I2 539 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 AUP1Q9Y679 476 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 STYXL1Q9Y6J8 313 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 SLCO1B1Q9Y6L6 691 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 ANKRD30BQ9BXX2 1392 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 SYNMO15061 1565 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 NEURL4Q96JN8 1562 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 SHPRHQ149N8 1683 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 PPLO60437 1756 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 FRMPD3Q5JV73 1810 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 ABCA9Q8IUA7 1624 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 USP32Q8NFA0 1604 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 ABCC1P33527 1531 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 SYCP2Q9BX26 1530 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 FAM135AQ9P2D6 1515 aa2.68□□□□□ -1.98
HMGN1P28-201ENST00000521340 PLB1Q6P1J6 1458 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 A0A1W2PQ72 361 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 NDUFAF8A1L188 74 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 XKRY2A2RUG3 117 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 ZNF840PA6NDX5 716 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 FRG2CA6NGY1 282 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 C11orf98E9PRG8 122 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 UBXN8O00124 270 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 AP3B1O00203 1094 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 NBR2O15453 112 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 TAPBPO15533 448 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 ECI2O75521 394 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 IGFBP1P08833 259 aaPredicted RBP2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 SNRPCP09234 159 aaKnown RBP2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 ALPIP09923 528 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 CT45A10P0DMU9 189 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 LAMP1P11279 417 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 FOLR2P14207 255 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 H2AFXP16104 143 aaPredicted RBP2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 CYP2B6P20813 491 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 CALML3P27482 149 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 PPP2R1BP30154 601 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 CD80P33681 288 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 GRIA1P42261 906 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 STARP49675 285 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 RIPPLY1Q0D2K3 151 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 IL18R1Q13478 541 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 CYP51A1Q16850 503 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 LRRC23Q53EV4 343 aaPredicted RBP2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 LGSNQ5TDP6 509 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 UFSP1Q6NVU6 142 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 FAAP20Q6NZ36 180 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 BLOC1S2Q6QNY1 142 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 SYT10Q6XYQ8 523 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 CEACAM19Q7Z692 300 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 KIAA1328Q86T90 577 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 TMEM17Q86X19 198 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 ZNF440Q8IYI8 595 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 CLDN19Q8N6F1 224 aa2.67□□□□□ -1.98
HMGN1P28-201ENST00000521340 ZNF248Q8NDW4 579 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms