RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 INHBAP08476 426 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 ANXA5P08758 320 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 RAB40ALP0C0E4 278 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 SLC35E2BP0CK96 405 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 CDH1P12830 882 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 EZRP15311 586 aaKnown RBP6.37□□□□□ -1.39
SDCBP-208ENST00000520228 GABRB1P18505 474 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 PSMB10P40306 273 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 SLC26A3P40879 764 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 MSH2P43246 934 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 HNMTP50135 292 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 CSNK2A1P68400 391 aaPredicted RBP6.37□□□□□ -1.39
SDCBP-208ENST00000520228 MRPS34P82930 218 aaKnown RBP6.37□□□□□ -1.39
SDCBP-208ENST00000520228 CDKL1Q00532 357 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 CDC20Q12834 499 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 TGFBIQ15582 683 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 PCGF3Q3KNV8 242 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 TAF1BQ53T94 588 aaPredicted RBP6.37□□□□□ -1.39
SDCBP-208ENST00000520228 CDKL4Q5MAI5 379 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 TEX35Q5T0J7 233 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 MLIPQ5VWP3 458 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 TRMT10CQ7L0Y3 403 aaKnown RBP6.37□□□□□ -1.39
SDCBP-208ENST00000520228 CCDC91Q7Z6B0 441 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 TICAM1Q8IUC6 712 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 PLD3Q8IV08 490 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 CSNK1A1LQ8N752 337 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 EIF1ADQ8N9N8 165 aaKnown RBP6.37□□□□□ -1.39
SDCBP-208ENST00000520228 CSNK2A3Q8NEV1 391 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 NUDCD2Q8WVJ2 157 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 SLC44A1Q8WWI5 657 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 PGAM5Q96HS1 289 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 EGLN2Q96KS0 407 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 CATSPER2Q96P56 530 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 GBP5Q96PP8 586 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 OR2A5Q96R48 311 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 RUFY1Q96T51 708 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 EGFL8Q99944 293 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 NLNQ9BYT8 704 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 MAGIXQ9H6Y5 334 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 NMRAL1Q9HBL8 299 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 ACOT9Q9Y305 439 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 SESN1Q9Y6P5 492 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 FAM208BQ5VWN6 2430 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 PTPRQQ9UMZ3 2332 aa6.37□□□□□ -1.39
SDCBP-208ENST00000520228 KCNE1BA0A087WTH5 132 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 NCF1BA6NI72 391 aaPredicted RBP6.36□□□□□ -1.39
SDCBP-208ENST00000520228 PRSS47A8MTI9 375 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 NCF1CA8MVU1 366 aaPredicted RBP6.36□□□□□ -1.39
SDCBP-208ENST00000520228 M0QZ24 198 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 TXNDC9O14530 226 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 C2P06681 752 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 CAPN1P07384 714 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 ABHD2P08910 425 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 NCF1P14598 390 aaPredicted RBP6.36□□□□□ -1.39
SDCBP-208ENST00000520228 CD1DP15813 335 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 CCR10P46092 362 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 SERPINB9P50453 376 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 CCR8P51685 355 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 CLNS1AP54105 237 aaKnown RBP6.36□□□□□ -1.39
SDCBP-208ENST00000520228 RPS15AP62244 130 aaKnown RBP6.36□□□□□ -1.39
SDCBP-208ENST00000520228 RPS18P62269 152 aaKnown RBP6.36□□□□□ -1.39
SDCBP-208ENST00000520228 CSNK1G2P78368 415 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 AIMP2Q13155 320 aaKnown RBP6.36□□□□□ -1.39
SDCBP-208ENST00000520228 IRF3Q14653 427 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 NCF4Q15080 339 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 OR4D1Q15615 310 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 DECR1Q16698 335 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 FAM83EQ2M2I3 478 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 DEFB109BQ30KR1 87 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 ATP1A1-AS1Q5TC04 95 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 LGSNQ5TDP6 509 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 GARNL3Q5VVW2 1013 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 SULT1C3Q6IMI6 304 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 PRMT9Q6P2P2 845 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 FAM198BQ6UWH4 519 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 CREB3L2Q70SY1 520 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 SYVN1Q86TM6 617 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 THOC6Q86W42 341 aaKnown RBP6.36□□□□□ -1.39
SDCBP-208ENST00000520228 TCAIMQ8N3R3 496 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 TBC1D19Q8N5T2 526 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 STAG3L4Q8TBR4 150 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 APOBEC4Q8WW27 367 aaKnown RBP6.36□□□□□ -1.39
SDCBP-208ENST00000520228 TANKQ92844 425 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 NEIL2Q969S2 332 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 PTERQ96BW5 349 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 MTBPQ96DY7 904 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 ELMOD3Q96FG2 381 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 WBP1Q96G27 269 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 CABS1Q96KC9 395 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 C3orf30Q96M34 536 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 TSNARE1Q96NA8 513 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 OR4K3Q96R72 315 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 PAFAH2Q99487 392 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 ALG9Q9H6U8 611 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 CNOT10Q9H9A5 744 aaKnown RBP6.36□□□□□ -1.39
SDCBP-208ENST00000520228 CD274Q9NZQ7 290 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 SLC22A14Q9Y267 594 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 PADI2Q9Y2J8 665 aa6.36□□□□□ -1.39
SDCBP-208ENST00000520228 KIF26BQ2KJY2 2108 aa6.35□□□□□ -1.39
SDCBP-208ENST00000520228 MGAQ8IWI9 3026 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms