RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 HTR4Q13639 388 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 HMGN3Q15651 99 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 LY6G5CQ5SRR4 150 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 LYSMD2Q8IV50 215 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 MOAP1Q96BY2 351 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 POM121Q96HA1 1249 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 MRGPRX2Q96LB1 330 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 GPRC5BQ9NZH0 403 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 SERTAD3Q9UJW9 196 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 SCN1AP35498 2009 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 STK17BO94768 372 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 NUDT1P36639 197 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 TLE3Q04726 772 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 TMEM150AQ86TG1 271 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 OR6M1Q8NGM8 313 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 TMEM231Q9H6L2 316 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 B4GALT6Q9UBX8 382 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 ITGB4P16144 1822 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 BRINP1O60477 761 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 PRAF2O60831 178 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 LY86O95711 162 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 CSTAP01040 98 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 APEHP13798 732 aaKnown RBP8.22□□□□□ -1.09
CSMD1-206ENST00000520002 ACTBP60709 375 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 ACTG1P63261 375 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 ADGRG5Q8IZF4 528 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 THAP4Q8WY91 577 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 OARD1Q9Y530 152 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 INSL5Q9Y5Q6 135 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 LEFTY2O00292 366 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 OR13C7P0DN81 318 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 MMP12P39900 470 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 DLX5P56178 289 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 TMEM115Q12893 351 aaPredicted RBP8.22□□□□□ -1.09
CSMD1-206ENST00000520002 SQSTM1Q13501 440 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 SLC5A12Q1EHB4 618 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 ZFAND4Q86XD8 727 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 DCAF4L2Q8NA75 395 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 ADAMTS14Q8WXS8 1223 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 INPP5KQ9BT40 448 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 TXLNGYQ9BZA5 131 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 HRASLS2Q9NWW9 162 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 OSGIN1Q9UJX0 560 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 H2BFMP0C1H6 154 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 RPS25P62851 125 aaKnown RBP8.22□□□□□ -1.09
CSMD1-206ENST00000520002 RPL13AP3Q6NVV1 102 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 H3F3CQ6NXT2 135 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 HACD2Q6Y1H2 254 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 FAM46BQ96A09 425 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 ZNF736B4DX44 427 aaPredicted RBP8.22□□□□□ -1.09
CSMD1-206ENST00000520002 GALTP07902 379 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 HLA-DMAP28067 261 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 DDOSTP39656 456 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 TMUB2Q71RG4 321 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 OR1F2PQ96R84 312 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 TMPRSS11EQ9UL52 423 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 PCDHGA2Q9Y5H1 932 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 NAP1L6A6NFF2 107 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 ERCC1P07992 297 aaPredicted RBP8.22□□□□□ -1.09
CSMD1-206ENST00000520002 CD63P08962 238 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 ZNF44P15621 663 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 ZNF691Q5VV52 312 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 KCNIP4Q6PIL6 250 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 GTF2H5Q6ZYL4 71 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 ZDHHC14Q8IZN3 488 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 C16orf78Q8WTQ4 265 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 RCE1Q9Y256 329 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 MYOFQ9NZM1 2061 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 POLEQ07864 2286 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 SOBPA7XYQ1 873 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 CFL1P23528 166 aaKnown RBP8.22□□□□□ -1.09
CSMD1-206ENST00000520002 GGT2P36268 569 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 HNRNPKP61978 463 aaKnown RBP eCLIP8.22□□□□□ -1.09
CSMD1-206ENST00000520002 LCN10Q6JVE6 187 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 THRSPQ92748 146 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 SCAMP4Q969E2 229 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 KCNK13Q9HB14 408 aa8.22□□□□□ -1.09
CSMD1-206ENST00000520002 LOC285095A0A1B0GVY8 99 aa8.21□□□□□ -1.09
CSMD1-206ENST00000520002 CSF1P09603 554 aa8.21□□□□□ -1.09
CSMD1-206ENST00000520002 UBE2NLQ5JXB2 153 aa8.21□□□□□ -1.09
CSMD1-206ENST00000520002 PLEKHS1Q5SXH7 462 aa8.21□□□□□ -1.09
CSMD1-206ENST00000520002 LIPJQ5W064 366 aa8.21□□□□□ -1.09
CSMD1-206ENST00000520002 TMEM225Q6GV28 225 aa8.21□□□□□ -1.09
CSMD1-206ENST00000520002 DPPA4Q7L190 304 aa8.21□□□□□ -1.09
CSMD1-206ENST00000520002 KANSL1Q7Z3B3 1105 aa8.21□□□□□ -1.09
CSMD1-206ENST00000520002 TSPAN10Q9H1Z9 355 aaPredicted RBP8.21□□□□□ -1.09
CSMD1-206ENST00000520002 SCPEP1Q9HB40 452 aa8.21□□□□□ -1.09
CSMD1-206ENST00000520002 KIF26BQ2KJY2 2108 aa8.21□□□□□ -1.09
CSMD1-206ENST00000520002 SOCS5O75159 536 aa8.21□□□□□ -1.09
CSMD1-206ENST00000520002 SYNGR4O95473 234 aa8.21□□□□□ -1.09
CSMD1-206ENST00000520002 TFAP2AP05549 437 aa8.21□□□□□ -1.09
CSMD1-206ENST00000520002 HNF1AP20823 631 aa8.21□□□□□ -1.09
CSMD1-206ENST00000520002 RBMS1P29558 406 aaKnown RBP8.21□□□□□ -1.09
CSMD1-206ENST00000520002 AKR1C3P42330 323 aa8.21□□□□□ -1.09
CSMD1-206ENST00000520002 C4orf17Q53FE4 359 aa8.21□□□□□ -1.09
CSMD1-206ENST00000520002 ZNF805Q5CZA5 627 aa8.21□□□□□ -1.09
CSMD1-206ENST00000520002 RPS26P11Q5JNZ5 115 aaPredicted RBP8.21□□□□□ -1.09
CSMD1-206ENST00000520002 SYNPRQ8TBG9 265 aa8.21□□□□□ -1.09
CSMD1-206ENST00000520002 SPOCK3Q9BQ16 436 aa8.21□□□□□ -1.09
CSMD1-206ENST00000520002 AIG1Q9NVV5 245 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms