RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 MUCL1Q96DR8 90 aa7.4□□□□□ -1.22
CTNNA1-215ENST00000519309 PHF21BQ96EK2 531 aa7.4□□□□□ -1.22
CTNNA1-215ENST00000519309 SRXN1Q9BYN0 137 aa7.4□□□□□ -1.22
CTNNA1-215ENST00000519309 TXLNGYQ9BZA5 131 aa7.4□□□□□ -1.22
CTNNA1-215ENST00000519309 TBL1XR1Q9BZK7 514 aa7.4□□□□□ -1.22
CTNNA1-215ENST00000519309 C12orf65Q9H3J6 166 aaKnown RBP7.4□□□□□ -1.22
CTNNA1-215ENST00000519309 TMEM185BQ9H7F4 350 aa7.4□□□□□ -1.22
CTNNA1-215ENST00000519309 COQ10BQ9H8M1 238 aa7.4□□□□□ -1.22
CTNNA1-215ENST00000519309 Q9N2J8 555 aa7.4□□□□□ -1.22
CTNNA1-215ENST00000519309 MED17Q9NVC6 651 aa7.4□□□□□ -1.22
CTNNA1-215ENST00000519309 PCTPQ9UKL6 214 aa7.4□□□□□ -1.22
CTNNA1-215ENST00000519309 SLC12A4Q9UP95 1085 aa7.4□□□□□ -1.22
CTNNA1-215ENST00000519309 FKBP7Q9Y680 259 aa7.4□□□□□ -1.22
CTNNA1-215ENST00000519309 NOTCH1P46531 2555 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 SERINC4A6NH21 518 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 FAM157AC9JC47 383 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 KIF2AO00139 706 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 RGS14O43566 566 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 LY6HO94772 140 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 VENTXO95231 258 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 UTS2O95399 124 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 NTN1O95631 604 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 TGFAP01135 160 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 YES1P07947 543 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 INHBAP08476 426 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 IL3P08700 152 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 BMP4P12644 408 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 GGT1P19440 569 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 CD40P25942 277 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 SHC1P29353 583 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 ZNF41P51814 821 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 CCNG1P51959 295 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 MANFP55145 182 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 ZSWIM7Q19AV6 140 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 GRAMD1BQ3KR37 738 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 ARL13AQ5H913 290 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 CPTPQ5TA50 214 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 SLC22A25Q6T423 547 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 OR2L13Q8N349 312 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 SLC43A2Q8N370 569 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 C1orf52Q8N6N3 182 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 POC1BQ8TC44 478 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 HOXB13Q92826 284 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 OSTF1Q92882 214 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 REXO5Q96IC2 774 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 PSD2Q9BQI7 771 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 SOX7Q9BT81 388 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 LMF2Q9BU23 707 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 BHLHE41Q9C0J9 482 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 ELOVL6Q9H5J4 265 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 NOL11Q9H8H0 719 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 TIGARQ9NQ88 270 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 PFDN4Q9NQP4 134 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 SLC35C2Q9NQQ7 365 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 FARSBQ9NSD9 589 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 GIMAP4Q9NUV9 329 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 SENP1Q9P0U3 644 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 MCM8Q9UJA3 840 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 ZNF225Q9UK10 706 aa7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 ING1Q9UK53 422 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 MRTO4Q9UKD2 239 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 C19orf53Q9UNZ5 99 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-215ENST00000519309 PRKDCP78527 4128 aaKnown RBP7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 LOC390937A0A1W2PQ73 354 aa7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 TMEM89A2RUT3 159 aa7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 TTC36A6NLP5 189 aa7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 A8MT66 165 aa7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 RIPK2O43353 540 aa7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 PRKD3O94806 890 aa7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 OXSR1O95747 527 aaPredicted RBP7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 RPS17P08708 135 aaKnown RBP7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 LINGO3P0C6S8 592 aa7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 COL6A2P12110 1019 aa7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 HSD3B1P14060 373 aa7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 IGHV1-2P23083 117 aa7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 EDNRAP25101 427 aa7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 HSD3B2P26439 372 aa7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 EIF1P41567 113 aaKnown RBP7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 FABP6P51161 128 aa7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 CDH13P55290 713 aa7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 CARD18P57730 90 aa7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 ACTG1P63261 375 aa7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 CHRNB3Q05901 458 aa7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 SWI5Q1ZZU3 235 aa7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 GLE1Q53GS7 698 aaKnown RBP7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 SH2D4BQ5SQS7 431 aa7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 TTC19Q6DKK2 380 aaPredicted RBP7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 LETMD1Q6P1Q0 360 aa7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 KLHL17Q6TDP4 642 aa7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 MISPQ8IVT2 679 aa7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 ZNF433Q8N7K0 673 aaPredicted RBP7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 C3orf56Q8N813 242 aa7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 MNS1Q8NEH6 495 aa7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 ZNF483Q8TF39 744 aaPredicted RBP7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 MZB1Q8WU39 189 aa7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 SLC9A6Q92581 669 aa7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 HPS1Q92902 700 aa7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 SORCS2Q96PQ0 1159 aa7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 RHOXF2Q9BQY4 288 aa7.38□□□□□ -1.23
CTNNA1-215ENST00000519309 INPP5KQ9BT40 448 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms