RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 S100PP25815 95 aa6.67□□□□□ -1.34
CLK4-202ENST00000519132 CDKN2CP42773 168 aa6.67□□□□□ -1.34
CLK4-202ENST00000519132 MARCKSL1P49006 195 aa6.67□□□□□ -1.34
CLK4-202ENST00000519132 ARPP19P56211 112 aa6.67□□□□□ -1.34
CLK4-202ENST00000519132 ERVK-8P63133 956 aa6.67□□□□□ -1.34
CLK4-202ENST00000519132 HSPB3Q12988 150 aa6.67□□□□□ -1.34
CLK4-202ENST00000519132 SELENBP1Q13228 472 aa6.67□□□□□ -1.34
CLK4-202ENST00000519132 VEZF1Q14119 521 aa6.67□□□□□ -1.34
CLK4-202ENST00000519132 ZFP1Q6P2D0 407 aa6.67□□□□□ -1.34
CLK4-202ENST00000519132 OFCC1Q8IZS5 231 aa6.67□□□□□ -1.34
CLK4-202ENST00000519132 EID3Q8N140 333 aa6.67□□□□□ -1.34
CLK4-202ENST00000519132 TTC9BQ8N6N2 239 aa6.67□□□□□ -1.34
CLK4-202ENST00000519132 BPIFCQ8NFQ6 507 aa6.67□□□□□ -1.34
CLK4-202ENST00000519132 ZNF596Q8TC21 504 aa6.67□□□□□ -1.34
CLK4-202ENST00000519132 SAP25Q8TEE9 199 aa6.67□□□□□ -1.34
CLK4-202ENST00000519132 FAM172AQ8WUF8 416 aa6.67□□□□□ -1.34
CLK4-202ENST00000519132 LRFN5Q96NI6 719 aa6.67□□□□□ -1.34
CLK4-202ENST00000519132 SEMA4CQ9C0C4 833 aa6.67□□□□□ -1.34
CLK4-202ENST00000519132 RAB33BQ9H082 229 aa6.67□□□□□ -1.34
CLK4-202ENST00000519132 EXO5Q9H790 373 aa6.67□□□□□ -1.34
CLK4-202ENST00000519132 ECT2Q9H8V3 914 aa6.67□□□□□ -1.34
CLK4-202ENST00000519132 ACTR8Q9H981 624 aa6.67□□□□□ -1.34
CLK4-202ENST00000519132 ASB4Q9Y574 426 aa6.67□□□□□ -1.34
CLK4-202ENST00000519132 PRSS51A0A1B0GVH4 220 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 TRMUO75648 421 aaKnown RBP6.66□□□□□ -1.34
CLK4-202ENST00000519132 GRAP2O75791 330 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 HOXB5P09067 269 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 NUDT17P0C025 328 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 PRF1P14222 555 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 MAGP20916 626 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 PTPN4P29074 926 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 CD40LGP29965 261 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 MIPP30301 263 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 VHLP40337 213 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 NKX2-1P43699 371 aaPredicted RBP6.66□□□□□ -1.34
CLK4-202ENST00000519132 MMP13P45452 471 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 ACTBP60709 375 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 YWHAGP61981 247 aaKnown RBP eCLIP6.66□□□□□ -1.34
CLK4-202ENST00000519132 ACTA2P62736 377 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 ACTG1P63261 375 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 ACTG2P63267 376 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 ACTC1P68032 377 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 ACTA1P68133 377 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 BAMBIQ13145 260 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 IRF4Q15306 451 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 TRIM16LQ309B1 348 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 SOWAHCQ53LP3 525 aaPredicted RBP6.66□□□□□ -1.34
CLK4-202ENST00000519132 OTUD1Q5VV17 481 aaPredicted RBP6.66□□□□□ -1.34
CLK4-202ENST00000519132 RWDD4Q6NW29 188 aaKnown RBP6.66□□□□□ -1.34
CLK4-202ENST00000519132 DDIASQ8IXT1 998 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 BEST3Q8N1M1 668 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 KDM8Q8N371 416 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 BHLHE23Q8NDY6 225 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 OR5M8Q8NGP6 311 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 RNASE11Q8TAA1 199 aaKnown RBP6.66□□□□□ -1.34
CLK4-202ENST00000519132 EXOSC8Q96B26 276 aaKnown RBP6.66□□□□□ -1.34
CLK4-202ENST00000519132 REPS1Q96D71 796 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 MTBPQ96DY7 904 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 MYADMQ96S97 322 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 GSDMCQ9BYG8 508 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 THEGQ9P2T0 379 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 SLC12A6Q9UHW9 1150 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 SH2B3Q9UQQ2 575 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 STARD10Q9Y365 291 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 UTP11Q9Y3A2 253 aaKnown RBP6.66□□□□□ -1.34
CLK4-202ENST00000519132 TMED3Q9Y3Q3 217 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 MSTNO14793 375 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 TCAPO15273 167 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 CST8O60676 142 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 NXPH3O95157 252 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 SEC24AO95486 1093 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 KLK3P07288 261 aaPredicted RBP6.66□□□□□ -1.34
CLK4-202ENST00000519132 CA3P07451 260 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 CAPGP40121 348 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 HELZP42694 1942 aaKnown RBP6.66□□□□□ -1.34
CLK4-202ENST00000519132 ILF3Q12906 894 aaKnown RBP eCLIP6.66□□□□□ -1.34
CLK4-202ENST00000519132 SHBQ15464 509 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 TEDDM1Q5T9Z0 273 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 SEL1L2Q5TEA6 688 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 SYPL2Q5VXT5 272 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 SCD5Q86SK9 330 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 FOXRED2Q8IWF2 684 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 SELENOHQ8IZQ5 122 aaKnown RBP6.66□□□□□ -1.34
CLK4-202ENST00000519132 ZNF398Q8TD17 642 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 SLA2Q9H6Q3 261 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 CENPMQ9NSP4 180 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 DKK2Q9UBU2 259 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 GNPTGQ9UJJ9 305 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 COPS3Q9UNS2 423 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 YIPF1Q9Y548 306 aa6.66□□□□□ -1.34
CLK4-202ENST00000519132 C12orf71A8MTZ7 269 aa6.65□□□□□ -1.34
CLK4-202ENST00000519132 H0Y8G0 127 aa6.65□□□□□ -1.34
CLK4-202ENST00000519132 CCL24O00175 119 aa6.65□□□□□ -1.34
CLK4-202ENST00000519132 HSPB6O14558 160 aa6.65□□□□□ -1.34
CLK4-202ENST00000519132 SULT1C4O75897 302 aa6.65□□□□□ -1.34
CLK4-202ENST00000519132 WDPCPO95876 746 aa6.65□□□□□ -1.34
CLK4-202ENST00000519132 PEX11BO96011 259 aa6.65□□□□□ -1.34
CLK4-202ENST00000519132 PROS1P07225 676 aa6.65□□□□□ -1.34
CLK4-202ENST00000519132 HOXD9P28356 352 aaPredicted RBP6.65□□□□□ -1.34
CLK4-202ENST00000519132 PTPN6P29350 595 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms