RNA–Protein interactions for RNA: ENST00000518959.1

ATP6V1C1-204, Transcript of ATPase H+ transporting V1 subunit C1, humanhuman

TSL 2

Gene ATP6V1C1, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C1-204ENST00000518959 ANXA9O76027 345 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 SRP72O76094 671 aaKnown RBP2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 NSA2O95478 260 aaKnown RBP2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 GAS8O95995 478 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 APOA4P06727 396 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 OR56A5P0C7T3 313 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 GATA1P15976 413 aaPredicted RBP2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 FERP16591 822 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 MAGP20916 626 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 CNR1P21554 472 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 TNFAIP3P21580 790 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 CMPK1P30085 196 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 BDKRB2P30411 391 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 MTIF2P46199 727 aaKnown RBP2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 RPL21P46778 160 aaKnown RBP2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 HOXA1P49639 335 aaPredicted RBP2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 SSR4P51571 173 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 ARL4CP56559 192 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 MAXP61244 160 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 ISL1P61371 349 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 GNB1P62873 340 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 PPIAP62937 165 aaKnown RBP2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 RPP38P78345 283 aaKnown RBP2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 PLGLB1Q02325 96 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 PTP4A2Q12974 167 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 BIKQ13323 160 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 MAMLD1Q13495 774 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 GTF2H2Q13888 395 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 RCAN2Q14206 197 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 RCN2Q14257 317 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 BECN1Q14457 450 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 ITIH4Q14624 930 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 HERC3Q15034 1050 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 TMED2Q15363 201 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 TAF1AQ15573 450 aaPredicted RBP2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 TPD52L1Q16890 204 aaPredicted RBP2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 CMPK2Q5EBM0 449 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 NHSL2Q5HYW2 709 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 ARMC3Q5W041 872 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 ALS2CLQ60I27 953 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 NSUN5P2Q63ZY6 315 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 HIST2H2BDQ6DRA6 164 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 OR2A2Q6IF42 318 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 GTF2H2CQ6P1K8 395 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 METTL2BQ6P1Q9 378 aaKnown RBP2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 CASC4Q6P4E1 433 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 FAM173BQ6P4H8 233 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 KCTD18Q6PI47 426 aaPredicted RBP2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 OPN5Q6U736 354 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 C12orf54Q6X4T0 127 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 RTL4Q6ZR62 310 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 BBS12Q6ZW61 710 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 COX15Q7KZN9 410 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 GLT6D1Q7Z4J2 308 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 SNX20Q7Z614 316 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 LRRC6Q86X45 466 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 CRLF3Q8IUI8 442 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 CCDC71Q8IV32 467 aaPredicted RBP2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 CYP4Z2PQ8N1L4 340 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 ZNF611Q8N823 705 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 CCNYQ8ND76 341 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 ZNF540Q8NDQ6 660 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 PLPP5Q8NEB5 264 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 OR5L2Q8NGL0 311 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 HUS1BQ8NHY5 278 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 WDR20Q8TBZ3 569 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 ZPLD1Q8TCW7 415 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 SYN2Q92777 582 aaPredicted RBP2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 PEX13Q92968 403 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 TBC1D20Q96BZ9 403 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 MMABQ96EY8 250 aaPredicted RBP2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 ZBED6CLQ96FA7 236 aaPredicted RBP2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 METTL2AQ96IZ6 378 aaKnown RBP2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 CABS1Q96KC9 395 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 RMDN2Q96LZ7 410 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 ALS2CR12Q96Q35 445 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 BBS4Q96RK4 519 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 RHNO1Q9BSD3 238 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 SNRNP25Q9BV90 132 aaKnown RBP2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 HEMGNQ9BXL5 484 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 REG4Q9BYZ8 158 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 PCBD2Q9H0N5 130 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 LIME1Q9H400 295 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 PPP1R3EQ9H7J1 279 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 NGBQ9NPG2 151 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 CNIH4Q9P003 139 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 SPATA7Q9P0W8 599 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 HSPB7Q9UBY9 170 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 TRIM10Q9UDY6 481 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 FAM153AQ9UHL3 310 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 BOKQ9UMX3 212 aaPredicted RBP2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 PPIEQ9UNP9 301 aaKnown RBP2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 ERVK-11Q9UQG0 969 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 AAR2Q9Y312 384 aaKnown RBP2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 FAM96BQ9Y3D0 163 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 TTLL3Q9Y4R7 772 aa2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 PCYT1BQ9Y5K3 369 aaPredicted RBP2.44□□□□□ -2.02
ATP6V1C1-204ENST00000518959 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms