RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 PAX7P23759 505 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 FASP25445 335 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 S100A3P33764 101 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 NPY4RP50391 375 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 REEP5Q00765 189 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 TFF2Q03403 129 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 RPA4Q13156 261 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 HTR4Q13639 388 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 PDE7AQ13946 482 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 KRT33BQ14525 404 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 SNAPC1Q16533 368 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 DUOXA1Q1HG43 343 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 HKDC1Q2TB90 917 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 ITPRIPL2Q3MIP1 535 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 NHSL2Q5HYW2 709 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 PIK3CD-AS1Q5SR53 167 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 FAM46CQ5VWP2 391 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 ZNF776Q68DI1 518 aaPredicted RBP4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 SIGIRRQ6IA17 410 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 DHRS7BQ6IAN0 325 aaPredicted RBP4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 GLYATQ6IB77 296 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 TMEM211Q6ICI0 200 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 CAPN13Q6MZZ7 669 aaPredicted RBP4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 MED27Q6P2C8 311 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 TBPL2Q6SJ96 375 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 TRMT11Q7Z4G4 463 aaKnown RBP4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 PTOV1Q86YD1 416 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 APLFQ8IW19 511 aaPredicted RBP4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 DCUN1D3Q8IWE4 304 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 TBC1D21Q8IYX1 336 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 ST13P4Q8IZP2 240 aaPredicted RBP4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 CLECL1Q8IZS7 167 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 HDDC3Q8N4P3 179 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 TSPAN14Q8NG11 270 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 OR52E4Q8NGH9 312 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 CDC26Q8NHZ8 85 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 FBXO30Q8TB52 745 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 SETD6Q8TBK2 473 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 SLC5A11Q8WWX8 675 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 FIG4Q92562 907 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 FAM162AQ96A26 154 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 ITCHQ96J02 903 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 ZNF514Q96K75 400 aaPredicted RBP4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 FOPNLQ96NB1 174 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 GABRG3Q99928 467 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 TBCDQ9BTW9 1192 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 EFCAB11Q9BUY7 163 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 CHID1Q9BWS9 393 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 OSBPL11Q9BXB4 747 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 ANKRD60Q9BZ19 345 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 TRIM4Q9C037 500 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 SLCO5A1Q9H2Y9 848 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 MMP27Q9H306 513 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 EHD1Q9H4M9 534 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 GORASP2Q9H8Y8 452 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 NTN4Q9HB63 628 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 OLAHQ9NV23 265 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 FAM120CQ9NX05 1096 aaKnown RBP4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 VNN3Q9NY84 501 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 VPS29Q9UBQ0 182 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 AP3M1Q9Y2T2 418 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 WBP11Q9Y2W2 641 aaKnown RBP4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 C5orf42Q9H799 3197 aa4.46□□□□□ -1.7
CTNNA1-212ENST00000518919 F5P12259 2224 aa4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 TRAV34A0A0B4J273 112 aa4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 A0A1W2PPV9 198 aa4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 CPED1A4D0V7 1026 aa4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 EME2A4GXA9 379 aaPredicted RBP4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 A6NNC1 897 aa4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 ANHXE9PGG2 379 aa4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 FOXE1O00358 373 aaPredicted RBP4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 SAP18O00422 153 aaKnown RBP4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 RFXANKO14593 260 aa4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 FPGTO14772 594 aa4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 SMAD9O15198 467 aaKnown RBP4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 CLOCKO15516 846 aa4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 PCDH7O60245 1069 aa4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 CREG1O75629 220 aa4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 TBX6O95947 436 aaPredicted RBP4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 EGFP01133 1207 aa4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 RETP07949 1114 aa4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 GNAO1P09471 354 aa4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 FAM58BPP0C7Q3 252 aa4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 C1GALT1C1LP0DN25 315 aa4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 CHRNB1P11230 501 aa4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 IDSP22304 550 aa4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 KELP23276 732 aa4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 PSMB5P28074 263 aa4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 PKLRP30613 574 aa4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 HPCAL1P37235 193 aa4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 MAGEA2P43356 314 aa4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 TNFRSF4P43489 277 aa4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 ASMTP46597 345 aa4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 TRPC1P48995 793 aa4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 RAB28P51157 221 aa4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 CRYBA2P53672 197 aa4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 PLOD1Q02809 727 aaPredicted RBP4.45□□□□□ -1.7
CTNNA1-212ENST00000518919 DMPKQ09013 629 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms