RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 PRG2P13727 222 aa13.85□□□□□ -0.19
TRAPPC9-205ENST00000518839 CSRP1P21291 193 aaKnown RBP13.85□□□□□ -0.19
TRAPPC9-205ENST00000518839 MMP11P24347 488 aa13.85□□□□□ -0.19
TRAPPC9-205ENST00000518839 HTR2AP28223 471 aa13.85□□□□□ -0.19
TRAPPC9-205ENST00000518839 SLC6A8P48029 635 aa13.85□□□□□ -0.19
TRAPPC9-205ENST00000518839 TMED10P49755 219 aaKnown RBP13.85□□□□□ -0.19
TRAPPC9-205ENST00000518839 CRISP1P54107 249 aa13.85□□□□□ -0.19
TRAPPC9-205ENST00000518839 FOXL2P58012 376 aa13.85□□□□□ -0.19
TRAPPC9-205ENST00000518839 COPZ1P61923 177 aa13.85□□□□□ -0.19
TRAPPC9-205ENST00000518839 RPS15P62841 145 aaKnown RBP13.85□□□□□ -0.19
TRAPPC9-205ENST00000518839 RPP38P78345 283 aaKnown RBP13.85□□□□□ -0.19
TRAPPC9-205ENST00000518839 HOXC5Q00444 222 aa13.85□□□□□ -0.19
TRAPPC9-205ENST00000518839 PCOLCEQ15113 449 aa13.85□□□□□ -0.19
TRAPPC9-205ENST00000518839 RBM48Q5RL73 367 aaKnown RBP13.85□□□□□ -0.19
TRAPPC9-205ENST00000518839 FNDC7Q5VTL7 733 aa13.85□□□□□ -0.19
TRAPPC9-205ENST00000518839 KLHL17Q6TDP4 642 aa13.85□□□□□ -0.19
TRAPPC9-205ENST00000518839 MBOAT2Q6ZWT7 520 aa13.85□□□□□ -0.19
TRAPPC9-205ENST00000518839 MISPQ8IVT2 679 aa13.85□□□□□ -0.19
TRAPPC9-205ENST00000518839 APLFQ8IW19 511 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC9-205ENST00000518839 ZNF786Q8N393 782 aa13.85□□□□□ -0.19
TRAPPC9-205ENST00000518839 SLC15A4Q8N697 577 aa13.85□□□□□ -0.19
TRAPPC9-205ENST00000518839 DEFB124Q8NES8 71 aa13.85□□□□□ -0.19
TRAPPC9-205ENST00000518839 M1APQ8TC57 530 aa13.85□□□□□ -0.19
TRAPPC9-205ENST00000518839 SLC22A8Q8TCC7 542 aa13.85□□□□□ -0.19
TRAPPC9-205ENST00000518839 HDAC2Q92769 488 aaKnown RBP13.85□□□□□ -0.19
TRAPPC9-205ENST00000518839 LMF1Q96S06 567 aa13.85□□□□□ -0.19
TRAPPC9-205ENST00000518839 MRPS26Q9BYN8 205 aaKnown RBP13.85□□□□□ -0.19
TRAPPC9-205ENST00000518839 NRSN2Q9GZP1 204 aa13.85□□□□□ -0.19
TRAPPC9-205ENST00000518839 BLOC1S6Q9UL45 172 aa13.85□□□□□ -0.19
TRAPPC9-205ENST00000518839 SLC7A7Q9UM01 511 aa13.85□□□□□ -0.19
TRAPPC9-205ENST00000518839 TMEM5Q9Y2B1 443 aa13.85□□□□□ -0.19
TRAPPC9-205ENST00000518839 NPFFR2Q9Y5X5 522 aa13.85□□□□□ -0.19
TRAPPC9-205ENST00000518839 USP34Q70CQ2 3546 aa13.85□□□□□ -0.19
TRAPPC9-205ENST00000518839 LAMA1P25391 3075 aa13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 IGHV1-45A0A0A0MS14 117 aa13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 TEX51A0A1B0GUA7 166 aa13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 C21orf140B9A014 251 aa13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 ALG1L2C9J202 215 aa13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 ZNF264O43296 627 aa13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 ICOSLGO75144 302 aa13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 FTH1P19P0C7X4 201 aa13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 POU2F1P14859 743 aa13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 TCN2P20062 427 aa13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 FUT4P22083 530 aa13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 GGT2P36268 569 aa13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 POLR2IP36954 125 aaKnown RBP13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 RBM34P42696 430 aaKnown RBP13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 ACAA2P42765 397 aaKnown RBP13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 ISL1P61371 349 aa13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 IL5RAQ01344 420 aa13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 PLAURQ03405 335 aa13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 FOXD4Q12950 439 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 TSPAN31Q12999 210 aa13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 RAPSNQ13702 412 aa13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 C3orf38Q5JPI3 329 aa13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 ZER1Q7Z7L7 766 aa13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 PRR22Q8IZ63 422 aa13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 PHOSPHO1Q8TCT1 267 aa13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 CT55Q8WUE5 264 aa13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 FBLIM1Q8WUP2 373 aa13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 DNAJA4Q8WW22 397 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 C8orf44Q96CB5 159 aa13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 PRR14Q9BWN1 585 aa13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 DEFB126Q9BYW3 111 aa13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 LAT2Q9GZY6 243 aa13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 HHATLQ9HCP6 504 aa13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 TCFL5Q9UL49 500 aa13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 FARSAQ9Y285 508 aaKnown RBP13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 PCDHGB5Q9Y5G0 923 aa13.84□□□□□ -0.19
TRAPPC9-205ENST00000518839 A0A0B4J2E0 115 aa13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 A0A1B0GX12 115 aa13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 CDC14CA4D256 554 aa13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 PROB1E7EW31 1015 aa13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 MPZL2O60487 215 aa13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 EIF4E2O60573 245 aaKnown RBP13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 THY1P04216 161 aa13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 COX6A1P12074 109 aa13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 CD82P27701 267 aa13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 STAT5AP42229 794 aa13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 GSSP48637 474 aa13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 CDC42P60953 191 aa13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 CXCR4P61073 352 aa13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 TEKQ02763 1124 aa13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 SSPNQ14714 243 aa13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 BTBD16Q32M84 506 aa13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 PLAG1Q6DJT9 500 aa13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 ULK3Q6PHR2 472 aa13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 NDUFAF7Q7L592 441 aa13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 NUP54Q7Z3B4 507 aa13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 TIPARPQ7Z3E1 657 aaKnown RBP13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 TMPRSS12Q86WS5 348 aa13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 NKAIN4Q8IVV8 208 aa13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 CDK20Q8IZL9 346 aa13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 NLGN4XQ8N0W4 816 aa13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 NLGN4YQ8NFZ3 816 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 ELP5Q8TE02 316 aa13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 TTC9Q92623 222 aa13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 TMCO6Q96DC7 493 aa13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 IMMP1LQ96LU5 166 aa13.83□□□□□ -0.2
TRAPPC9-205ENST00000518839 PRSS27Q9BQR3 290 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms