RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 ERVK-6Q9BXR3 956 aa5.38□□□□□ -1.55
PABPC1-207ENST00000518716 MS4A8Q9BY19 250 aa5.38□□□□□ -1.55
PABPC1-207ENST00000518716 ROGDIQ9GZN7 287 aa5.38□□□□□ -1.55
PABPC1-207ENST00000518716 OPN3Q9H1Y3 402 aaPredicted RBP5.38□□□□□ -1.55
PABPC1-207ENST00000518716 SLCO5A1Q9H2Y9 848 aa5.38□□□□□ -1.55
PABPC1-207ENST00000518716 DENND2DQ9H6A0 471 aaPredicted RBP5.38□□□□□ -1.55
PABPC1-207ENST00000518716 RPF2Q9H7B2 306 aaKnown RBP5.38□□□□□ -1.55
PABPC1-207ENST00000518716 RNF122Q9H9V4 155 aa5.38□□□□□ -1.55
PABPC1-207ENST00000518716 TCF7L1Q9HCS4 588 aa5.38□□□□□ -1.55
PABPC1-207ENST00000518716 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.38□□□□□ -1.55
PABPC1-207ENST00000518716 SLC13A4Q9UKG4 626 aa5.38□□□□□ -1.55
PABPC1-207ENST00000518716 CDC42EP3Q9UKI2 254 aa5.38□□□□□ -1.55
PABPC1-207ENST00000518716 EXO1Q9UQ84 846 aaKnown RBP5.38□□□□□ -1.55
PABPC1-207ENST00000518716 ERVK-19Q9WJR5 959 aa5.38□□□□□ -1.55
PABPC1-207ENST00000518716 VWA7Q9Y334 891 aa5.38□□□□□ -1.55
PABPC1-207ENST00000518716 OARD1Q9Y530 152 aa5.38□□□□□ -1.55
PABPC1-207ENST00000518716 ASB4Q9Y574 426 aa5.38□□□□□ -1.55
PABPC1-207ENST00000518716 CMYA5Q8N3K9 4069 aa5.38□□□□□ -1.55
PABPC1-207ENST00000518716 C2orf92A0A1B0GVN3 265 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 A0A1W2PS29 197 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 WDR91A4D1P6 747 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 ANKDD1BA6NHY2 528 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 H0YIV9 168 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 NDUFS8O00217 210 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 RIPK2O43353 540 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 KCNAB3O43448 404 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 OR10H2O60403 315 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 ICOSLGO75144 302 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 PRKRAO75569 313 aaKnown RBP5.37□□□□□ -1.55
PABPC1-207ENST00000518716 SLC22A3O75751 556 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 CBR3O75828 277 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 PLGP00747 810 aaPredicted RBP5.37□□□□□ -1.55
PABPC1-207ENST00000518716 CD8AP01732 235 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 CT62P0C5K7 136 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 MYZAPP0CAP1 466 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 SLC35E2BP0CK96 405 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 SLC35E2P0CK97 266 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 POU2F1P14859 743 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 ZNF37AP17032 561 aaPredicted RBP5.37□□□□□ -1.55
PABPC1-207ENST00000518716 IL11P20809 199 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 TBXA2RP21731 343 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 CPN2P22792 545 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 ABCD3P28288 659 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 ACVR1BP36896 505 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 HNRNPH2P55795 449 aaKnown RBP5.37□□□□□ -1.55
PABPC1-207ENST00000518716 RPS4XP62701 263 aaKnown RBP5.37□□□□□ -1.55
PABPC1-207ENST00000518716 RPP38P78345 283 aaKnown RBP5.37□□□□□ -1.55
PABPC1-207ENST00000518716 CBX1P83916 185 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 OCRLQ01968 901 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 TNFRSF17Q02223 184 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 SRYQ05066 204 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 GPS1Q13098 491 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 CYLC2Q14093 348 aaPredicted RBP5.37□□□□□ -1.55
PABPC1-207ENST00000518716 VEZF1Q14119 521 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 DOC2AQ14183 400 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 SPCS2Q15005 226 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 PPA1Q15181 289 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 TRIP13Q15645 432 aaPredicted RBP5.37□□□□□ -1.55
PABPC1-207ENST00000518716 SMUG1Q53HV7 270 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 CDKL4Q5MAI5 379 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 SPDYAQ5MJ70 313 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 TEDDM1Q5T9Z0 273 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 DEPDC1Q5TB30 811 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 SEL1L2Q5TEA6 688 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 OR2A2Q6IF42 318 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 OR7E24Q6IFN5 339 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 RAB12Q6IQ22 244 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 SCIMPQ6UWF3 145 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 ENPP6Q6UWR7 440 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 C6orf89Q6UWU4 347 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 STAC2Q6ZMT1 411 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 NUP54Q7Z3B4 507 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 KRT73Q86Y46 540 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 LAS2Q8IYD9 372 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 ZCCHC7Q8N3Z6 543 aaKnown RBP5.37□□□□□ -1.55
PABPC1-207ENST00000518716 TMCO5AQ8N6Q1 288 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 PCYOX1LQ8NBM8 494 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 SRFBP1Q8NEF9 429 aaKnown RBP5.37□□□□□ -1.55
PABPC1-207ENST00000518716 OR10H5Q8NGA6 315 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 RIT1Q92963 219 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 ZC3HAV1LQ96H79 300 aaKnown RBP5.37□□□□□ -1.55
PABPC1-207ENST00000518716 C7orf34Q96L11 122 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 GAL3ST4Q96RP7 486 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 NODALQ96S42 347 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 KCNJ15Q99712 375 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 SYT3Q9BQG1 590 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 CHCHD6Q9BRQ6 235 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 TMEM79Q9BSE2 394 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 TXLNGYQ9BZA5 131 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 DPH5Q9H2P9 285 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 ESRP2Q9H6T0 727 aaKnown RBP5.37□□□□□ -1.55
PABPC1-207ENST00000518716 COPS7BQ9H9Q2 264 aaPredicted RBP5.37□□□□□ -1.55
PABPC1-207ENST00000518716 CXorf21Q9HAI6 301 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 GALNT9Q9HCQ5 603 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 SERHLQ9NQF3 203 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 BATF3Q9NR55 127 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 SNX15Q9NRS6 342 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 TBCCD1Q9NVR7 557 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 MS4A12Q9NXJ0 267 aa5.37□□□□□ -1.55
PABPC1-207ENST00000518716 MOCS1Q9NZB8 636 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms