RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 CNIH3Q8TBE1 160 aa3.22□□□□□ -1.89
SQLE-202ENST00000518604 SLC25A38Q96DW6 304 aa3.22□□□□□ -1.89
SQLE-202ENST00000518604 OR5B2Q96R09 309 aa3.22□□□□□ -1.89
SQLE-202ENST00000518604 TPPP3Q9BW30 176 aa3.22□□□□□ -1.89
SQLE-202ENST00000518604 RHOJQ9H4E5 214 aa3.22□□□□□ -1.89
SQLE-202ENST00000518604 CALHM2Q9HA72 323 aa3.22□□□□□ -1.89
SQLE-202ENST00000518604 OR1A1Q9P1Q5 309 aa3.22□□□□□ -1.89
SQLE-202ENST00000518604 LAMP5Q9UJQ1 280 aa3.22□□□□□ -1.89
SQLE-202ENST00000518604 GSTK1Q9Y2Q3 226 aa3.22□□□□□ -1.89
SQLE-202ENST00000518604 OARD1Q9Y530 152 aa3.22□□□□□ -1.89
SQLE-202ENST00000518604 PPIAL4AQ9Y536 164 aa3.22□□□□□ -1.89
SQLE-202ENST00000518604 USP16Q9Y5T5 823 aa3.22□□□□□ -1.89
SQLE-202ENST00000518604 CFAP65Q6ZU64 1925 aaKnown RBP3.21□□□□□ -1.9
SQLE-202ENST00000518604 ATP10DQ9P241 1426 aa3.21□□□□□ -1.9
SQLE-202ENST00000518604 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.21□□□□□ -1.9
SQLE-202ENST00000518604 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.21□□□□□ -1.9
SQLE-202ENST00000518604 ZFP92A6NM28 416 aa3.21□□□□□ -1.9
SQLE-202ENST00000518604 PEX11AO75192 247 aa3.21□□□□□ -1.9
SQLE-202ENST00000518604 ZNF254O75437 659 aa3.21□□□□□ -1.9
SQLE-202ENST00000518604 GPX5O75715 221 aa3.21□□□□□ -1.9
SQLE-202ENST00000518604 UGT2B17O75795 530 aa3.21□□□□□ -1.9
SQLE-202ENST00000518604 HSPB1P04792 205 aaKnown RBP3.21□□□□□ -1.9
SQLE-202ENST00000518604 CCDC166P0CW27 439 aa3.21□□□□□ -1.9
SQLE-202ENST00000518604 DNAH10OSP0CZ25 163 aa3.21□□□□□ -1.9
SQLE-202ENST00000518604 PGCP20142 388 aa3.21□□□□□ -1.9
SQLE-202ENST00000518604 TPSB2P20231 275 aa3.21□□□□□ -1.9
SQLE-202ENST00000518604 TBXA2RP21731 343 aa3.21□□□□□ -1.9
SQLE-202ENST00000518604 ZBTB25P24278 435 aa3.21□□□□□ -1.9
SQLE-202ENST00000518604 MAGEA5P43359 124 aa3.21□□□□□ -1.9
SQLE-202ENST00000518604 BDKRB1P46663 353 aa3.21□□□□□ -1.9
SQLE-202ENST00000518604 NUCB2P80303 420 aa3.21□□□□□ -1.9
SQLE-202ENST00000518604 LAGE3Q14657 143 aa3.21□□□□□ -1.9
SQLE-202ENST00000518604 TPSAB1Q15661 275 aa3.21□□□□□ -1.9
SQLE-202ENST00000518604 MAPK6Q16659 721 aa3.21□□□□□ -1.9
SQLE-202ENST00000518604 LRRC36Q1X8D7 754 aa3.21□□□□□ -1.9
SQLE-202ENST00000518604 TMEM52BQ4KMG9 183 aa3.21□□□□□ -1.9
SQLE-202ENST00000518604 TRPM8Q7Z2W7 1104 aa3.21□□□□□ -1.9
SQLE-202ENST00000518604 PPP1R27Q86WC6 154 aa3.21□□□□□ -1.9
SQLE-202ENST00000518604 ABCA7Q8IZY2 2146 aa3.21□□□□□ -1.9
SQLE-202ENST00000518604 OR2T33Q8NG76 320 aa3.21□□□□□ -1.9
SQLE-202ENST00000518604 M1APQ8TC57 530 aa3.21□□□□□ -1.9
SQLE-202ENST00000518604 SPRYD4Q8WW59 207 aaPredicted RBP3.21□□□□□ -1.9
SQLE-202ENST00000518604 CRNKL1Q9BZJ0 848 aaKnown RBP3.21□□□□□ -1.9
SQLE-202ENST00000518604 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.21□□□□□ -1.9
SQLE-202ENST00000518604 ADAM22Q9P0K1 906 aa3.21□□□□□ -1.9
SQLE-202ENST00000518604 RIMS3Q9UJD0 308 aa3.21□□□□□ -1.9
SQLE-202ENST00000518604 WDR45Q9Y484 360 aa3.21□□□□□ -1.9
SQLE-202ENST00000518604 IGHV7-81A0A0B4J1V7 117 aa3.2□□□□□ -1.9
SQLE-202ENST00000518604 LOC100131303A0A0U1RQF7 123 aa3.2□□□□□ -1.9
SQLE-202ENST00000518604 PPIAL4DF5H284 164 aa3.2□□□□□ -1.9
SQLE-202ENST00000518604 NDC80O14777 642 aa3.2□□□□□ -1.9
SQLE-202ENST00000518604 HDAC3O15379 428 aa3.2□□□□□ -1.9
SQLE-202ENST00000518604 TBL1XO60907 577 aa3.2□□□□□ -1.9
SQLE-202ENST00000518604 NT5EP21589 574 aa3.2□□□□□ -1.9
SQLE-202ENST00000518604 DIO3P55073 304 aa3.2□□□□□ -1.9
SQLE-202ENST00000518604 BCL2L1Q07817 233 aa3.2□□□□□ -1.9
SQLE-202ENST00000518604 ST3GAL3Q11203 375 aa3.2□□□□□ -1.9
SQLE-202ENST00000518604 RAB40BQ12829 278 aa3.2□□□□□ -1.9
SQLE-202ENST00000518604 CCDC57Q2TAC2 916 aa3.2□□□□□ -1.9
SQLE-202ENST00000518604 CFAP221Q4G0U5 840 aa3.2□□□□□ -1.9
SQLE-202ENST00000518604 SULT1C3Q6IMI6 304 aa3.2□□□□□ -1.9
SQLE-202ENST00000518604 CXCL17Q6UXB2 119 aa3.2□□□□□ -1.9
SQLE-202ENST00000518604 RAET1EQ8TD07 263 aa3.2□□□□□ -1.9
SQLE-202ENST00000518604 SLC5A11Q8WWX8 675 aa3.2□□□□□ -1.9
SQLE-202ENST00000518604 SYAP1Q96A49 352 aaPredicted RBP3.2□□□□□ -1.9
SQLE-202ENST00000518604 HAVCR1Q96D42 359 aa3.2□□□□□ -1.9
SQLE-202ENST00000518604 PHYHIPLQ96FC7 376 aa3.2□□□□□ -1.9
SQLE-202ENST00000518604 C4orf36Q96KX1 117 aa3.2□□□□□ -1.9
SQLE-202ENST00000518604 ZNF184Q99676 751 aaPredicted RBP3.2□□□□□ -1.9
SQLE-202ENST00000518604 SLC6A7Q99884 636 aa3.2□□□□□ -1.9
SQLE-202ENST00000518604 NANSQ9NR45 359 aa3.2□□□□□ -1.9
SQLE-202ENST00000518604 ONECUT1Q9UBC0 465 aa3.2□□□□□ -1.9
SQLE-202ENST00000518604 DCDC2Q9UHG0 476 aa3.2□□□□□ -1.9
SQLE-202ENST00000518604 ZNF256Q9Y2P7 627 aaPredicted RBP3.2□□□□□ -1.9
SQLE-202ENST00000518604 AP1M2Q9Y6Q5 423 aa3.2□□□□□ -1.9
SQLE-202ENST00000518604 FRMPD4Q14CM0 1322 aa3.19□□□□□ -1.9
SQLE-202ENST00000518604 IGKV6D-41A0A0C4DH26 115 aa3.19□□□□□ -1.9
SQLE-202ENST00000518604 SMIM28A0A1B0GU29 152 aa3.19□□□□□ -1.9
SQLE-202ENST00000518604 PP2D1A8MPX8 630 aa3.19□□□□□ -1.9
SQLE-202ENST00000518604 A8MUI8 341 aa3.19□□□□□ -1.9
SQLE-202ENST00000518604 NPIPA7E9PJI5 369 aa3.19□□□□□ -1.9
SQLE-202ENST00000518604 EFNA2O43921 213 aa3.19□□□□□ -1.9
SQLE-202ENST00000518604 TBX19O60806 448 aa3.19□□□□□ -1.9
SQLE-202ENST00000518604 UFL1O94874 794 aa3.19□□□□□ -1.9
SQLE-202ENST00000518604 PCCBP05166 539 aa3.19□□□□□ -1.9
SQLE-202ENST00000518604 H2BFMP0C1H6 154 aa3.19□□□□□ -1.9
SQLE-202ENST00000518604 NPIPA8P0DM63 369 aa3.19□□□□□ -1.9
SQLE-202ENST00000518604 KRT13P13646 458 aa3.19□□□□□ -1.9
SQLE-202ENST00000518604 IGLL1P15814 213 aa3.19□□□□□ -1.9
SQLE-202ENST00000518604 GCKP35557 465 aa3.19□□□□□ -1.9
SQLE-202ENST00000518604 AP3M2P53677 418 aa3.19□□□□□ -1.9
SQLE-202ENST00000518604 PLA2G16P53816 162 aa3.19□□□□□ -1.9
SQLE-202ENST00000518604 LIM2P55344 173 aa3.19□□□□□ -1.9
SQLE-202ENST00000518604 ELAVL3Q14576 367 aaKnown RBP3.19□□□□□ -1.9
SQLE-202ENST00000518604 KYAT1Q16773 422 aa3.19□□□□□ -1.9
SQLE-202ENST00000518604 TIGITQ495A1 244 aa3.19□□□□□ -1.9
SQLE-202ENST00000518604 SLC36A3Q495N2 470 aa3.19□□□□□ -1.9
SQLE-202ENST00000518604 ACSM5Q6NUN0 579 aa3.19□□□□□ -1.9
SQLE-202ENST00000518604 C16orf62Q7Z3J2 963 aa3.19□□□□□ -1.9
SQLE-202ENST00000518604 GRAMD2AQ8IUY3 354 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms