RNA–Protein interactions for RNA: ENST00000517857.1

TOP1MT-203, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 2

Gene TOP1MT, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-203ENST00000517857 SLC52A3Q9NQ40 469 aa13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 MED17Q9NVC6 651 aa13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 THUMPD1Q9NXG2 353 aaKnown RBP13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 SLC25A37Q9NYZ2 338 aa13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 CALML5Q9NZT1 146 aa13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 VAPAQ9P0L0 249 aa13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 SLAMF8Q9P0V8 285 aa13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 L3MBTL1Q9Y468 752 aa13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 PCNX1Q96RV3 2341 aa13.19□□□□□ -0.3
TOP1MT-203ENST00000517857 AHRRA9YTQ3 701 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 SEC14L5O43304 696 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 GUSBP08236 651 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 UBTFL6P0CB48 400 aaPredicted RBP13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 PEPDP12955 493 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 HOXB9P17482 250 aaPredicted RBP13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 SEC24CP53992 1094 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 CRISP3P54108 245 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 B3GALT5-AS1P59052 145 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 GNGT1P63211 74 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 FADDQ13158 208 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 NFYCQ13952 458 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 RGNQ15493 299 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 MAPRE2Q15555 327 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 MAPK14Q16539 360 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 PLPPR5Q32ZL2 321 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 MMEL1Q495T6 779 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 GLYR1Q49A26 553 aaPredicted RBP13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 RTL6Q6ICC9 239 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 XKRXQ6PP77 449 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 CBLN3Q6UW01 205 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 EIF3MQ7L2H7 374 aaKnown RBP13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 CHMP1BQ7LBR1 199 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 SPATA21Q7Z572 469 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 MSRB3Q8IXL7 192 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 MEIOBQ8N635 442 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 TOR1AIP2Q8NFQ8 470 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 WDR60Q8WVS4 1066 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 OIT3Q8WWZ8 545 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 ZBTB8AQ96BR9 441 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 PSMG3-AS1Q96PY0 264 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 TTYH2Q9BSA4 534 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 SAP130Q9H0E3 1048 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 SLC38A1Q9H2H9 487 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 RUBCNLQ9H714 662 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 SAR1AQ9NR31 198 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 KCNE5Q9UJ90 142 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 CORO2BQ9UQ03 480 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 CAPN7Q9Y6W3 813 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 PTPN13Q12923 2485 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 DOPEY1Q5JWR5 2465 aa13.18□□□□□ -0.3
TOP1MT-203ENST00000517857 SPTBN1Q01082 2364 aaKnown RBP13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 SPTAN1Q13813 2472 aaKnown RBP13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 HEATR5AQ86XA9 2040 aa13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 ICE1Q9Y2F5 2266 aa13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 EVPLLA8MZ36 301 aa13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 C5orf58C9J3I9 102 aa13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 LINC01387J3KSC0 135 aa13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 EIF4E2O60573 245 aaKnown RBP13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 CLDN1O95832 211 aa13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 GLI4P10075 376 aa13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 ZNF708P17019 499 aa13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 ZNF17P17021 662 aa13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 LSP1P33241 339 aa13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 LHX2P50458 406 aa13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 FOXF1Q12946 379 aa13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 KLF10Q13118 480 aa13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 CBFBQ13951 182 aa13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 GNA13Q14344 377 aa13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 FGFBP1Q14512 234 aa13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 RPS26P11Q5JNZ5 115 aaPredicted RBP13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 GCNT6Q5T4J0 391 aa13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 MAMDC2Q7Z304 686 aaPredicted RBP13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 RETREG3Q86VR2 466 aa13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 LACC1Q8IV20 430 aa13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 PEX5LQ8IYB4 626 aa13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 CA5BP1Q8WTZ4 195 aa13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 TSPEARQ8WU66 669 aa13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 TMEM19Q96HH6 336 aa13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 RNF145Q96MT1 663 aa13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 ELAC2Q9BQ52 826 aaKnown RBP13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 KLHDC3Q9BQ90 382 aa13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 TUBA1CQ9BQE3 449 aa13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 STOML1Q9UBI4 398 aa13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 PLEKHB1Q9UF11 243 aaPredicted RBP13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 RNF6Q9Y252 685 aa13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 SLC35A3Q9Y2D2 325 aa13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 ZNF337Q9Y3M9 751 aa13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 KIAA1549Q9HCM3 1950 aa13.17□□□□□ -0.3
TOP1MT-203ENST00000517857 FAM90A27PA6NNH2 459 aa13.16□□□□□ -0.3
TOP1MT-203ENST00000517857 PRSS44E7EML9 344 aa13.16□□□□□ -0.3
TOP1MT-203ENST00000517857 DBIP07108 87 aaKnown RBP13.16□□□□□ -0.3
TOP1MT-203ENST00000517857 NUDT7P0C024 238 aa13.16□□□□□ -0.3
TOP1MT-203ENST00000517857 CPN1P15169 458 aa13.16□□□□□ -0.3
TOP1MT-203ENST00000517857 IL7RP16871 459 aa13.16□□□□□ -0.3
TOP1MT-203ENST00000517857 ME2P23368 584 aa13.16□□□□□ -0.3
TOP1MT-203ENST00000517857 CLDN18P56856 261 aa13.16□□□□□ -0.3
TOP1MT-203ENST00000517857 SKP2Q13309 424 aa13.16□□□□□ -0.3
TOP1MT-203ENST00000517857 CPLX4Q7Z7G2 160 aa13.16□□□□□ -0.3
TOP1MT-203ENST00000517857 SNX32Q86XE0 403 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms