RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 CPNE4Q96A23 557 aaPredicted RBP13.54□□□□□ -0.24
CSGALNACT1-204ENST00000517494 PPCDCQ96CD2 204 aa13.54□□□□□ -0.24
CSGALNACT1-204ENST00000517494 MS4A4EQ96PG1 132 aa13.54□□□□□ -0.24
CSGALNACT1-204ENST00000517494 POTEKPQ9BYX7 375 aa13.54□□□□□ -0.24
CSGALNACT1-204ENST00000517494 IQCGQ9H095 443 aaKnown RBP13.54□□□□□ -0.24
CSGALNACT1-204ENST00000517494 RRAGDQ9NQL2 400 aaPredicted RBP13.54□□□□□ -0.24
CSGALNACT1-204ENST00000517494 WBP11Q9Y2W2 641 aaKnown RBP13.54□□□□□ -0.24
CSGALNACT1-204ENST00000517494 MXRA5Q9NR99 2828 aa13.54□□□□□ -0.24
CSGALNACT1-204ENST00000517494 IGHV3-15A0A0B4J1V0 119 aa13.53□□□□□ -0.24
CSGALNACT1-204ENST00000517494 SERTM1A2A2V5 107 aa13.53□□□□□ -0.24
CSGALNACT1-204ENST00000517494 RSL1D1O76021 490 aaKnown RBP13.53□□□□□ -0.24
CSGALNACT1-204ENST00000517494 NGFRP08138 427 aa13.53□□□□□ -0.24
CSGALNACT1-204ENST00000517494 ALOX5P09917 674 aa13.53□□□□□ -0.24
CSGALNACT1-204ENST00000517494 EFNA1P20827 205 aaPredicted RBP13.53□□□□□ -0.24
CSGALNACT1-204ENST00000517494 MANFP55145 182 aaKnown RBP13.53□□□□□ -0.24
CSGALNACT1-204ENST00000517494 CDH11P55287 796 aa13.53□□□□□ -0.24
CSGALNACT1-204ENST00000517494 C21orf58P58505 322 aa13.53□□□□□ -0.24
CSGALNACT1-204ENST00000517494 DUSP5Q16690 384 aa13.53□□□□□ -0.24
CSGALNACT1-204ENST00000517494 PGGHGQ32M88 737 aa13.53□□□□□ -0.24
CSGALNACT1-204ENST00000517494 TIFABQ6ZNK6 161 aa13.53□□□□□ -0.24
CSGALNACT1-204ENST00000517494 FCRLAQ7L513 359 aa13.53□□□□□ -0.24
CSGALNACT1-204ENST00000517494 BHLHA15Q7RTS1 189 aaPredicted RBP13.53□□□□□ -0.24
CSGALNACT1-204ENST00000517494 MISPQ8IVT2 679 aa13.53□□□□□ -0.24
CSGALNACT1-204ENST00000517494 SLC16A11Q8NCK7 471 aa13.53□□□□□ -0.24
CSGALNACT1-204ENST00000517494 OR6Y1Q8NGX8 325 aa13.53□□□□□ -0.24
CSGALNACT1-204ENST00000517494 FAM76AQ8TAV0 307 aa13.53□□□□□ -0.24
CSGALNACT1-204ENST00000517494 PHOSPHO1Q8TCT1 267 aa13.53□□□□□ -0.24
CSGALNACT1-204ENST00000517494 C16orf58Q96GQ5 468 aa13.53□□□□□ -0.24
CSGALNACT1-204ENST00000517494 BARX1Q9HBU1 254 aaPredicted RBP13.53□□□□□ -0.24
CSGALNACT1-204ENST00000517494 UBQLN4Q9NRR5 601 aa13.53□□□□□ -0.24
CSGALNACT1-204ENST00000517494 FAIMQ9NVQ4 179 aa13.53□□□□□ -0.24
CSGALNACT1-204ENST00000517494 GIN1Q9NXP7 522 aa13.53□□□□□ -0.24
CSGALNACT1-204ENST00000517494 CISD1Q9NZ45 108 aaKnown RBP13.53□□□□□ -0.24
CSGALNACT1-204ENST00000517494 SH3BP4Q9P0V3 963 aa13.53□□□□□ -0.24
CSGALNACT1-204ENST00000517494 DPRXA6NFQ7 191 aa13.52□□□□□ -0.25
CSGALNACT1-204ENST00000517494 GPRIN2O60269 458 aa13.52□□□□□ -0.25
CSGALNACT1-204ENST00000517494 RAMP1O60894 148 aa13.52□□□□□ -0.25
CSGALNACT1-204ENST00000517494 LYZL6O75951 148 aa13.52□□□□□ -0.25
CSGALNACT1-204ENST00000517494 PRKD3O94806 890 aa13.52□□□□□ -0.25
CSGALNACT1-204ENST00000517494 LINGO3P0C6S8 592 aa13.52□□□□□ -0.25
CSGALNACT1-204ENST00000517494 MYL2P10916 166 aa13.52□□□□□ -0.25
CSGALNACT1-204ENST00000517494 EIF1P41567 113 aaKnown RBP13.52□□□□□ -0.25
CSGALNACT1-204ENST00000517494 NUDT6P53370 316 aa13.52□□□□□ -0.25
CSGALNACT1-204ENST00000517494 ZNF117Q03924 483 aa13.52□□□□□ -0.25
CSGALNACT1-204ENST00000517494 ITGADQ13349 1161 aa13.52□□□□□ -0.25
CSGALNACT1-204ENST00000517494 TMEM176BQ3YBM2 270 aaPredicted RBP13.52□□□□□ -0.25
CSGALNACT1-204ENST00000517494 ZNF385BQ569K4 471 aa13.52□□□□□ -0.25
CSGALNACT1-204ENST00000517494 CFAP157Q5JU67 520 aa13.52□□□□□ -0.25
CSGALNACT1-204ENST00000517494 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.52□□□□□ -0.25
CSGALNACT1-204ENST00000517494 LCA5Q86VQ0 697 aa13.52□□□□□ -0.25
CSGALNACT1-204ENST00000517494 CLHC1Q8NHS4 586 aa13.52□□□□□ -0.25
CSGALNACT1-204ENST00000517494 FBXO27Q8NI29 283 aa13.52□□□□□ -0.25
CSGALNACT1-204ENST00000517494 PIWIL2Q8TC59 973 aaKnown RBP13.52□□□□□ -0.25
CSGALNACT1-204ENST00000517494 TSSK3Q96PN8 268 aa13.52□□□□□ -0.25
CSGALNACT1-204ENST00000517494 RHNO1Q9BSD3 238 aa13.52□□□□□ -0.25
CSGALNACT1-204ENST00000517494 TRAF4Q9BUZ4 470 aaPredicted RBP13.52□□□□□ -0.25
CSGALNACT1-204ENST00000517494 TRIM2Q9C040 744 aa13.52□□□□□ -0.25
CSGALNACT1-204ENST00000517494 LRTM1Q9HBL6 345 aa13.52□□□□□ -0.25
CSGALNACT1-204ENST00000517494 FIS1Q9Y3D6 152 aa13.52□□□□□ -0.25
CSGALNACT1-204ENST00000517494 PTGDR2Q9Y5Y4 395 aa13.52□□□□□ -0.25
CSGALNACT1-204ENST00000517494 PCNX3Q9H6A9 2034 aa13.52□□□□□ -0.25
CSGALNACT1-204ENST00000517494 PRR14LQ5THK1 2151 aa13.51□□□□□ -0.25
CSGALNACT1-204ENST00000517494 IGHV4-30-2A0A087WSY4 118 aa13.51□□□□□ -0.25
CSGALNACT1-204ENST00000517494 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.51□□□□□ -0.25
CSGALNACT1-204ENST00000517494 NPIPA5A0A0B4J1W7 369 aa13.51□□□□□ -0.25
CSGALNACT1-204ENST00000517494 GJE1A6NN92 205 aa13.51□□□□□ -0.25
CSGALNACT1-204ENST00000517494 C9JVG2 144 aa13.51□□□□□ -0.25
CSGALNACT1-204ENST00000517494 NPIPA7E9PJI5 369 aa13.51□□□□□ -0.25
CSGALNACT1-204ENST00000517494 ZNF195O14628 629 aa13.51□□□□□ -0.25
CSGALNACT1-204ENST00000517494 PHF1O43189 567 aaPredicted RBP13.51□□□□□ -0.25
CSGALNACT1-204ENST00000517494 YES1P07947 543 aa13.51□□□□□ -0.25
CSGALNACT1-204ENST00000517494 IFI6P09912 130 aa13.51□□□□□ -0.25
CSGALNACT1-204ENST00000517494 NPIPA8P0DM63 369 aa13.51□□□□□ -0.25
CSGALNACT1-204ENST00000517494 PYGBP11216 843 aa13.51□□□□□ -0.25
CSGALNACT1-204ENST00000517494 ATP6V1C1P21283 382 aa13.51□□□□□ -0.25
CSGALNACT1-204ENST00000517494 ENPP1P22413 925 aa13.51□□□□□ -0.25
CSGALNACT1-204ENST00000517494 ELK4P28324 431 aa13.51□□□□□ -0.25
CSGALNACT1-204ENST00000517494 SLC7A1P30825 629 aa13.51□□□□□ -0.25
CSGALNACT1-204ENST00000517494 SERPINB4P48594 390 aa13.51□□□□□ -0.25
CSGALNACT1-204ENST00000517494 POU6F2P78424 691 aaPredicted RBP13.51□□□□□ -0.25
CSGALNACT1-204ENST00000517494 P2RY6Q15077 328 aa13.51□□□□□ -0.25
CSGALNACT1-204ENST00000517494 PPA1Q15181 289 aa13.51□□□□□ -0.25
CSGALNACT1-204ENST00000517494 CLEC6AQ6EIG7 209 aa13.51□□□□□ -0.25
CSGALNACT1-204ENST00000517494 TRIM46Q7Z4K8 759 aa13.51□□□□□ -0.25
CSGALNACT1-204ENST00000517494 TMCO5AQ8N6Q1 288 aa13.51□□□□□ -0.25
CSGALNACT1-204ENST00000517494 ZNF614Q8N883 585 aa13.51□□□□□ -0.25
CSGALNACT1-204ENST00000517494 RFWD2Q8NHY2 731 aa13.51□□□□□ -0.25
CSGALNACT1-204ENST00000517494 ZFP90Q8TF47 636 aa13.51□□□□□ -0.25
CSGALNACT1-204ENST00000517494 ZNF775Q96BV0 537 aaPredicted RBP13.51□□□□□ -0.25
CSGALNACT1-204ENST00000517494 GIMAP5Q96F15 307 aa13.51□□□□□ -0.25
CSGALNACT1-204ENST00000517494 PRSS50Q9UI38 385 aa13.51□□□□□ -0.25
CSGALNACT1-204ENST00000517494 ABCA1O95477 2261 aa13.5□□□□□ -0.25
CSGALNACT1-204ENST00000517494 A0A1W2PNR3 127 aa13.5□□□□□ -0.25
CSGALNACT1-204ENST00000517494 FAM234BA2RU67 622 aa13.5□□□□□ -0.25
CSGALNACT1-204ENST00000517494 ZNF814B7Z6K7 855 aa13.5□□□□□ -0.25
CSGALNACT1-204ENST00000517494 ABCD4O14678 606 aa13.5□□□□□ -0.25
CSGALNACT1-204ENST00000517494 OIP5O43482 229 aa13.5□□□□□ -0.25
CSGALNACT1-204ENST00000517494 URI1O94763 535 aaPredicted RBP13.5□□□□□ -0.25
CSGALNACT1-204ENST00000517494 GCAP28676 217 aa13.5□□□□□ -0.25
CSGALNACT1-204ENST00000517494 ECHS1P30084 290 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms