RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 MFFQ9GZY8 342 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 TREM1Q9NP99 234 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 CYSLTR2Q9NS75 346 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 FAM86C1Q9NVL1 165 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 CBLCQ9ULV8 474 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 HS3ST2Q9Y278 367 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 HMGN4O00479 90 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 GOSR2O14653 212 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 PRAMEF2O60811 474 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 ZNF432O94892 652 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 PAK4O96013 591 aaPredicted RBP6.24□□□□□ -1.41
CPNE3-203ENST00000517490 STATHP02808 62 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 PROS1P07225 676 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 RAB40ALP0C0E4 278 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 SNRPBP14678 240 aaKnown RBP6.24□□□□□ -1.41
CPNE3-203ENST00000517490 NAA10P41227 235 aaPredicted RBP6.24□□□□□ -1.41
CPNE3-203ENST00000517490 SRP9P49458 86 aaKnown RBP6.24□□□□□ -1.41
CPNE3-203ENST00000517490 CCR9P51686 369 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 RAE1P78406 368 aaKnown RBP6.24□□□□□ -1.41
CPNE3-203ENST00000517490 TAF13Q15543 124 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 CCSMST1Q4G0I0 132 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 PRAMEF8Q5VWM4 474 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 PRAMEF7Q5VXH5 474 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 GSG1LQ6UXU4 331 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 PRSS42Q7Z5A4 293 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 OR4K14Q8NGD5 310 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 ZCCHC10Q8TBK6 192 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 TMEM239Q8WW34 195 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 LCN9Q8WX39 176 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 RAB40AQ8WXH6 277 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 ST8SIA4Q92187 359 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 MVB12BQ9H7P6 319 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 NANSQ9NR45 359 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 MAFFQ9ULX9 164 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 TMEM88BA6NKF7 163 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 ELOA3DA6NLF2 546 aaPredicted RBP6.24□□□□□ -1.41
CPNE3-203ENST00000517490 XKRYO14609 159 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 CHP2O43745 196 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 CLEC3AO75596 197 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 CSF1P09603 554 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 GIPP09681 153 aaPredicted RBP6.24□□□□□ -1.41
CPNE3-203ENST00000517490 GKN3PP0CG01 181 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 GJA1P17302 382 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 HLA-FP30511 346 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 S100A11P31949 105 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 DNASE1L1P49184 302 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 PCBP3P57721 371 aaKnown RBP6.24□□□□□ -1.41
CPNE3-203ENST00000517490 DYRK1AQ13627 763 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 ELOA3BQ3SY89 546 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 TP53I3Q53FA7 332 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 EIF5AL1Q6IS14 154 aaKnown RBP6.24□□□□□ -1.41
CPNE3-203ENST00000517490 CD300LGQ6UXG3 332 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 APOOLQ6UXV4 268 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 ZNF627Q7L945 461 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 PRICKLE2Q7Z3G6 844 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 RD3Q7Z3Z2 195 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 SLC38A6Q8IZM9 456 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 C9orf62Q8N4C0 152 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 ELOA3Q8NG57 546 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 RNF31Q96EP0 1072 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 SFXN2Q96NB2 322 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 SIGLEC11Q96RL6 698 aa6.24□□□□□ -1.41
CPNE3-203ENST00000517490 SLC5A10A0PJK1 596 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 SOCS6O14544 535 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 SPDEFO95238 335 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 AK1P00568 194 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 RENP00797 406 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 PVALBP20472 110 aaPredicted RBP6.23□□□□□ -1.41
CPNE3-203ENST00000517490 MAP3K8P41279 467 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 HTR4Q13639 388 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 SWI5Q1ZZU3 235 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 MTFR2Q6P444 385 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 ALKAL2Q6UX46 152 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 LYPD8Q6UX82 237 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 CD300LDQ6UXZ3 194 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 TMPRSS12Q86WS5 348 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 VRK2Q86Y07 508 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 LRRC25Q8N386 305 aaPredicted RBP6.23□□□□□ -1.41
CPNE3-203ENST00000517490 ZNF527Q8NB42 609 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 KREMEN2Q8NCW0 462 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 ZDHHC1Q8WTX9 485 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 HAVCR1Q96D42 359 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 OTUB2Q96DC9 234 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 CASD1Q96PB1 797 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 OR7D2Q96RA2 312 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 ZNF559Q9BR84 538 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 MS4A8Q9BY19 250 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 TRIM2Q9C040 744 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 KCND3Q9UK17 655 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 ICKQ9UPZ9 632 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 COL4A5P29400 1685 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 A0A087WUU8 490 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 TBC1D3KA0A087X1G2 549 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 EDDM13A0A1B0GTR0 161 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 TBC1D3FA6NER0 549 aaPredicted RBP6.23□□□□□ -1.41
CPNE3-203ENST00000517490 ANTXRLA6NF34 631 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 KDM4EB2RXH2 506 aaPredicted RBP6.23□□□□□ -1.41
CPNE3-203ENST00000517490 GPR171O14626 319 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 GPRIN2O60269 458 aa6.23□□□□□ -1.41
CPNE3-203ENST00000517490 HRGP04196 525 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms