RNA–Protein interactions for RNA: ENST00000517026.1

SCARNA21-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 139 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21-201ENST00000517026 GPX2P18283 190 aa13.22□□□□□ -0.29
SCARNA21-201ENST00000517026 PPIBP23284 216 aaKnown RBP13.22□□□□□ -0.29
SCARNA21-201ENST00000517026 CASP6P55212 293 aa13.22□□□□□ -0.29
SCARNA21-201ENST00000517026 GFRA1P56159 465 aa13.22□□□□□ -0.29
SCARNA21-201ENST00000517026 CRYZQ08257 329 aaKnown RBP13.22□□□□□ -0.29
SCARNA21-201ENST00000517026 FADDQ13158 208 aa13.22□□□□□ -0.29
SCARNA21-201ENST00000517026 ZNF630Q2M218 657 aaPredicted RBP13.22□□□□□ -0.29
SCARNA21-201ENST00000517026 TRMT5Q32P41 509 aaKnown RBP13.22□□□□□ -0.29
SCARNA21-201ENST00000517026 VASNQ6EMK4 673 aa13.22□□□□□ -0.29
SCARNA21-201ENST00000517026 ZNF585AQ6P3V2 769 aa13.22□□□□□ -0.29
SCARNA21-201ENST00000517026 MTERF4Q7Z6M4 381 aaKnown RBP13.22□□□□□ -0.29
SCARNA21-201ENST00000517026 FAM26EQ8N5C1 309 aa13.22□□□□□ -0.29
SCARNA21-201ENST00000517026 ABTB1Q969K4 478 aaPredicted RBP13.22□□□□□ -0.29
SCARNA21-201ENST00000517026 SARAFQ96BY9 339 aa13.22□□□□□ -0.29
SCARNA21-201ENST00000517026 ZNF524Q96C55 264 aa13.22□□□□□ -0.29
SCARNA21-201ENST00000517026 RCN3Q96D15 328 aa13.22□□□□□ -0.29
SCARNA21-201ENST00000517026 SFXN2Q96NB2 322 aa13.22□□□□□ -0.29
SCARNA21-201ENST00000517026 NPAS1Q99742 590 aa13.22□□□□□ -0.29
SCARNA21-201ENST00000517026 THUMPD3Q9BV44 507 aaKnown RBP13.22□□□□□ -0.29
SCARNA21-201ENST00000517026 MTHFD2LQ9H903 347 aaPredicted RBP13.22□□□□□ -0.29
SCARNA21-201ENST00000517026 A4GALTQ9NPC4 353 aa13.22□□□□□ -0.29
SCARNA21-201ENST00000517026 THUMPD1Q9NXG2 353 aaKnown RBP13.22□□□□□ -0.29
SCARNA21-201ENST00000517026 VDAC3Q9Y277 283 aa13.22□□□□□ -0.29
SCARNA21-201ENST00000517026 MRPS18CQ9Y3D5 142 aaKnown RBP13.22□□□□□ -0.29
SCARNA21-201ENST00000517026 L3MBTL1Q9Y468 752 aa13.22□□□□□ -0.29
SCARNA21-201ENST00000517026 ZNF407Q9C0G0 2248 aa13.22□□□□□ -0.29
SCARNA21-201ENST00000517026 A0A1B0GUH1 482 aa13.21□□□□□ -0.29
SCARNA21-201ENST00000517026 AGAP5A6NIR3 686 aa13.21□□□□□ -0.29
SCARNA21-201ENST00000517026 BBIP1A8MTZ0 92 aa13.21□□□□□ -0.29
SCARNA21-201ENST00000517026 FXYD1O00168 92 aa13.21□□□□□ -0.29
SCARNA21-201ENST00000517026 CSTAP01040 98 aa13.21□□□□□ -0.29
SCARNA21-201ENST00000517026 UBTFL6P0CB48 400 aaPredicted RBP13.21□□□□□ -0.29
SCARNA21-201ENST00000517026 UBL4AP11441 157 aa13.21□□□□□ -0.29
SCARNA21-201ENST00000517026 COX4I1P13073 169 aa13.21□□□□□ -0.29
SCARNA21-201ENST00000517026 MSX1P28360 303 aa13.21□□□□□ -0.29
SCARNA21-201ENST00000517026 CRISP3P54108 245 aa13.21□□□□□ -0.29
SCARNA21-201ENST00000517026 PLAURQ03405 335 aa13.21□□□□□ -0.29
SCARNA21-201ENST00000517026 TOMM34Q15785 309 aaPredicted RBP13.21□□□□□ -0.29
SCARNA21-201ENST00000517026 ADRM1Q16186 407 aa13.21□□□□□ -0.29
SCARNA21-201ENST00000517026 COQ5Q5HYK3 327 aa13.21□□□□□ -0.29
SCARNA21-201ENST00000517026 NHSL2Q5HYW2 709 aa13.21□□□□□ -0.29
SCARNA21-201ENST00000517026 WLSQ5T9L3 541 aa13.21□□□□□ -0.29
SCARNA21-201ENST00000517026 RAET1LQ5VY80 246 aa13.21□□□□□ -0.29
SCARNA21-201ENST00000517026 IFNEQ86WN2 208 aa13.21□□□□□ -0.29
SCARNA21-201ENST00000517026 RPRMLQ8N4K4 120 aa13.21□□□□□ -0.29
SCARNA21-201ENST00000517026 NFKBIDQ8NI38 313 aa13.21□□□□□ -0.29
SCARNA21-201ENST00000517026 LRRC58Q96CX6 371 aa13.21□□□□□ -0.29
SCARNA21-201ENST00000517026 TREX2Q9BQ50 279 aaPredicted RBP13.21□□□□□ -0.29
SCARNA21-201ENST00000517026 MED17Q9NVC6 651 aa13.21□□□□□ -0.29
SCARNA21-201ENST00000517026 ADAM21Q9UKJ8 722 aa13.21□□□□□ -0.29
SCARNA21-201ENST00000517026 ICAM5Q9UMF0 924 aa13.21□□□□□ -0.29
SCARNA21-201ENST00000517026 ARL2BPQ9Y2Y0 163 aa13.21□□□□□ -0.29
SCARNA21-201ENST00000517026 ABCA12Q86UK0 2595 aa13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 NCKAP5O14513 1909 aa13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 OR2M5A3KFT3 312 aa13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 TMEM247A6NEH6 219 aa13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 ZNF264O43296 627 aa13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 EIF4E2O60573 245 aaKnown RBP13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 ARAFP10398 606 aa13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 RPS4Y1P22090 263 aaKnown RBP13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 PGM1P36871 562 aa13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 P2RX1P51575 399 aa13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 CCR4P51679 360 aa13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 KCNJ10P78508 379 aa13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 SRYQ05066 204 aa13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 SKP2Q13309 424 aa13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 FGFBP1Q14512 234 aa13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 GANABQ14697 944 aaKnown RBP13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 RABL3Q5HYI8 236 aa13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 NANOGP8Q6NSW7 305 aa13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 EIF3MQ7L2H7 374 aaKnown RBP13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 VRK2Q86Y07 508 aa13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 MARVELD2Q8N4S9 558 aa13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 TMCO5AQ8N6Q1 288 aa13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 OR5W2Q8NH69 310 aa13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 RP9Q8TA86 221 aaKnown RBP13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 GPR119Q8TDV5 335 aa13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 CNOT9Q92600 299 aaKnown RBP13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 DTNBP1Q96EV8 351 aa13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 WDYHV1Q96HA8 205 aa13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 LAT2Q9GZY6 243 aa13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 NANOGQ9H9S0 305 aa13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 HHATLQ9HCP6 504 aa13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 CALML5Q9NZT1 146 aa13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 SUCOQ9UBS9 1254 aaKnown RBP13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 CORO2BQ9UQ03 480 aa13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 CAMK2AQ9UQM7 478 aa13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 MEMO1Q9Y316 297 aa13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 ZNF337Q9Y3M9 751 aa13.2□□□□□ -0.3
SCARNA21-201ENST00000517026 DSPPQ9NZW4 1301 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 HIVEP3Q5T1R4 2406 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 A0A087WZY1 265 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 A0A0G2JPF8 293 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 KDM4EB2RXH2 506 aaPredicted RBP13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 HNRNPCL2B2RXH8 293 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 HNRNPCL3B7ZW38 293 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 C5orf58C9J3I9 102 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 AIM2O14862 343 aa13.19□□□□□ -0.3
SCARNA21-201ENST00000517026 HNRNPCL1O60812 293 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 260.8 ms