RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 SAMD3Q8N6K7 520 aa-1.16□□□□□ -2.6
SNORA40.13-201ENST00000516379 LRRC75AQ8NAA5 344 aa-1.16□□□□□ -2.6
SNORA40.13-201ENST00000516379 APPL2Q8NEU8 664 aa-1.16□□□□□ -2.6
SNORA40.13-201ENST00000516379 OR52J3Q8NH60 311 aa-1.16□□□□□ -2.6
SNORA40.13-201ENST00000516379 SETD6Q8TBK2 473 aa-1.16□□□□□ -2.6
SNORA40.13-201ENST00000516379 DTX3LQ8TDB6 740 aa-1.16□□□□□ -2.6
SNORA40.13-201ENST00000516379 RAD54LQ92698 747 aa-1.16□□□□□ -2.6
SNORA40.13-201ENST00000516379 LHX4Q969G2 390 aa-1.16□□□□□ -2.6
SNORA40.13-201ENST00000516379 AGPAT1Q99943 283 aa-1.16□□□□□ -2.6
SNORA40.13-201ENST00000516379 SRXN1Q9BYN0 137 aa-1.16□□□□□ -2.6
SNORA40.13-201ENST00000516379 CAB39LQ9H9S4 337 aa-1.16□□□□□ -2.6
SNORA40.13-201ENST00000516379 GIMAP4Q9NUV9 329 aa-1.16□□□□□ -2.6
SNORA40.13-201ENST00000516379 ZNF639Q9UID6 485 aa-1.16□□□□□ -2.6
SNORA40.13-201ENST00000516379 MRPS33Q9Y291 106 aaKnown RBP-1.16□□□□□ -2.6
SNORA40.13-201ENST00000516379 TTC21BQ7Z4L5 1316 aa-1.16□□□□□ -2.6
SNORA40.13-201ENST00000516379 ESYT2A0FGR8 921 aa-1.17□□□□□ -2.6
SNORA40.13-201ENST00000516379 TMEM223A0PJW6 202 aa-1.17□□□□□ -2.6
SNORA40.13-201ENST00000516379 IDSB3KWA1 339 aa-1.17□□□□□ -2.6
SNORA40.13-201ENST00000516379 NPIPA2E9PIF3 369 aa-1.17□□□□□ -2.6
SNORA40.13-201ENST00000516379 EI24O14681 340 aa-1.17□□□□□ -2.6
SNORA40.13-201ENST00000516379 PGLSO95336 258 aa-1.17□□□□□ -2.6
SNORA40.13-201ENST00000516379 ANKRD34CP0C6C1 535 aa-1.17□□□□□ -2.6
SNORA40.13-201ENST00000516379 P0DMU3 169 aa-1.17□□□□□ -2.6
SNORA40.13-201ENST00000516379 FAM231AP0DMU4 169 aa-1.17□□□□□ -2.6
SNORA40.13-201ENST00000516379 FAM231CP0DMU5 169 aa-1.17□□□□□ -2.6
SNORA40.13-201ENST00000516379 ALPPL2P10696 532 aa-1.17□□□□□ -2.6
SNORA40.13-201ENST00000516379 CCNA2P20248 432 aa-1.17□□□□□ -2.6
SNORA40.13-201ENST00000516379 ASMTP46597 345 aa-1.17□□□□□ -2.6
SNORA40.13-201ENST00000516379 CTAG1AP78358 180 aa-1.17□□□□□ -2.6
SNORA40.13-201ENST00000516379 WASHC5Q12768 1159 aa-1.17□□□□□ -2.6
SNORA40.13-201ENST00000516379 LRRC73Q5JTD7 316 aa-1.17□□□□□ -2.6
SNORA40.13-201ENST00000516379 SHEQ5VZ18 495 aa-1.17□□□□□ -2.6
SNORA40.13-201ENST00000516379 ZNF620Q6ZNG0 422 aa-1.17□□□□□ -2.6
SNORA40.13-201ENST00000516379 PHLDB2Q86SQ0 1253 aa-1.17□□□□□ -2.6
SNORA40.13-201ENST00000516379 SERPINA9Q86WD7 417 aa-1.17□□□□□ -2.6
SNORA40.13-201ENST00000516379 GID4Q8IVV7 300 aa-1.17□□□□□ -2.6
SNORA40.13-201ENST00000516379 PRPF31Q8WWY3 499 aaKnown RBP-1.17□□□□□ -2.6
SNORA40.13-201ENST00000516379 CSPG4P5Q96PW8 444 aa-1.17□□□□□ -2.6
SNORA40.13-201ENST00000516379 S1PR3Q99500 378 aa-1.17□□□□□ -2.6
SNORA40.13-201ENST00000516379 TEX12Q9BXU0 123 aa-1.17□□□□□ -2.6
SNORA40.13-201ENST00000516379 ZFP14Q9HCL3 533 aa-1.17□□□□□ -2.6
SNORA40.13-201ENST00000516379 ORC3Q9UBD5 711 aaPredicted RBP-1.17□□□□□ -2.6
SNORA40.13-201ENST00000516379 METP08581 1390 aa-1.18□□□□□ -2.6
SNORA40.13-201ENST00000516379 PLAC8L1A1L4L8 177 aa-1.18□□□□□ -2.6
SNORA40.13-201ENST00000516379 AGAP14A8MT82 685 aa-1.18□□□□□ -2.6
SNORA40.13-201ENST00000516379 EZRP15311 586 aaKnown RBP-1.18□□□□□ -2.6
SNORA40.13-201ENST00000516379 GCH1P30793 250 aa-1.18□□□□□ -2.6
SNORA40.13-201ENST00000516379 UQCRFS1P47985 274 aa-1.18□□□□□ -2.6
SNORA40.13-201ENST00000516379 GALK2Q01415 458 aa-1.18□□□□□ -2.6
SNORA40.13-201ENST00000516379 HSPA14Q0VDF9 509 aa-1.18□□□□□ -2.6
SNORA40.13-201ENST00000516379 ST3GAL3Q11203 375 aa-1.18□□□□□ -2.6
SNORA40.13-201ENST00000516379 KLF5Q13887 457 aaPredicted RBP-1.18□□□□□ -2.6
SNORA40.13-201ENST00000516379 FAM53BQ14153 422 aa-1.18□□□□□ -2.6
SNORA40.13-201ENST00000516379 MARCH8Q5T0T0 291 aa-1.18□□□□□ -2.6
SNORA40.13-201ENST00000516379 C1orf146Q5VVC0 180 aa-1.18□□□□□ -2.6
SNORA40.13-201ENST00000516379 TCF24Q7RTU0 167 aa-1.18□□□□□ -2.6
SNORA40.13-201ENST00000516379 TSEN54Q7Z6J9 526 aaKnown RBP-1.18□□□□□ -2.6
SNORA40.13-201ENST00000516379 SFRP1Q8N474 314 aa-1.18□□□□□ -2.6
SNORA40.13-201ENST00000516379 APCDD1LQ8NCL9 501 aa-1.18□□□□□ -2.6
SNORA40.13-201ENST00000516379 LY6G5BQ8NDX9 201 aa-1.18□□□□□ -2.6
SNORA40.13-201ENST00000516379 FAM110BQ8TC76 370 aa-1.18□□□□□ -2.6
SNORA40.13-201ENST00000516379 EXT2Q93063 718 aa-1.18□□□□□ -2.6
SNORA40.13-201ENST00000516379 FAM46BQ96A09 425 aa-1.18□□□□□ -2.6
SNORA40.13-201ENST00000516379 MPHOSPH6Q99547 160 aaKnown RBP-1.18□□□□□ -2.6
SNORA40.13-201ENST00000516379 CCDC106Q9BWC9 280 aa-1.18□□□□□ -2.6
SNORA40.13-201ENST00000516379 PLGRKTQ9HBL7 147 aa-1.18□□□□□ -2.6
SNORA40.13-201ENST00000516379 POLD4Q9HCU8 107 aa-1.18□□□□□ -2.6
SNORA40.13-201ENST00000516379 MRPL17Q9NRX2 175 aaKnown RBP-1.18□□□□□ -2.6
SNORA40.13-201ENST00000516379 MIS18AQ9NYP9 233 aa-1.18□□□□□ -2.6
SNORA40.13-201ENST00000516379 SAMD4AQ9UPU9 718 aaKnown RBP-1.18□□□□□ -2.6
SNORA40.13-201ENST00000516379 ASF1AQ9Y294 204 aa-1.18□□□□□ -2.6
SNORA40.13-201ENST00000516379 MAB21L2Q9Y586 359 aa-1.18□□□□□ -2.6
SNORA40.13-201ENST00000516379 MAD1L1Q9Y6D9 718 aa-1.18□□□□□ -2.6
SNORA40.13-201ENST00000516379 STAB1Q9NY15 2570 aa-1.18□□□□□ -2.6
SNORA40.13-201ENST00000516379 ABCA4P78363 2273 aa-1.19□□□□□ -2.6
SNORA40.13-201ENST00000516379 TCRBV21S2A2A0A5A6 115 aa-1.19□□□□□ -2.6
SNORA40.13-201ENST00000516379 GLOD5A6NK44 160 aa-1.19□□□□□ -2.6
SNORA40.13-201ENST00000516379 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP-1.19□□□□□ -2.6
SNORA40.13-201ENST00000516379 NUPL2O15504 423 aaKnown RBP-1.19□□□□□ -2.6
SNORA40.13-201ENST00000516379 CCDC22O60826 627 aa-1.19□□□□□ -2.6
SNORA40.13-201ENST00000516379 FCGR3BO75015 233 aa-1.19□□□□□ -2.6
SNORA40.13-201ENST00000516379 GLSO94925 669 aaPredicted RBP-1.19□□□□□ -2.6
SNORA40.13-201ENST00000516379 PSMB4P28070 264 aa-1.19□□□□□ -2.6
SNORA40.13-201ENST00000516379 MAT2AP31153 395 aaKnown RBP-1.19□□□□□ -2.6
SNORA40.13-201ENST00000516379 CCT5P48643 541 aa-1.19□□□□□ -2.6
SNORA40.13-201ENST00000516379 SLC11A1P49279 550 aa-1.19□□□□□ -2.6
SNORA40.13-201ENST00000516379 DHPSP49366 369 aaPredicted RBP-1.19□□□□□ -2.6
SNORA40.13-201ENST00000516379 TAS2R19P59542 299 aa-1.19□□□□□ -2.6
SNORA40.13-201ENST00000516379 RPS4XP62701 263 aaKnown RBP-1.19□□□□□ -2.6
SNORA40.13-201ENST00000516379 LOXL1Q08397 574 aaPredicted RBP-1.19□□□□□ -2.6
SNORA40.13-201ENST00000516379 RFX4Q33E94 735 aa-1.19□□□□□ -2.6
SNORA40.13-201ENST00000516379 TEX44Q53QW1 395 aa-1.19□□□□□ -2.6
SNORA40.13-201ENST00000516379 RAET1GQ6H3X3 334 aa-1.19□□□□□ -2.6
SNORA40.13-201ENST00000516379 CASP12Q6UXS9 341 aa-1.19□□□□□ -2.6
SNORA40.13-201ENST00000516379 TOM1L2Q6ZVM7 507 aa-1.19□□□□□ -2.6
SNORA40.13-201ENST00000516379 SIDT2Q8NBJ9 832 aaKnown RBP-1.19□□□□□ -2.6
SNORA40.13-201ENST00000516379 FBXL13Q8NEE6 735 aa-1.19□□□□□ -2.6
SNORA40.13-201ENST00000516379 SPATA18Q8TC71 538 aa-1.19□□□□□ -2.6
SNORA40.13-201ENST00000516379 CACNG8Q8WXS5 425 aa-1.19□□□□□ -2.6
SNORA40.13-201ENST00000516379 COG3Q96JB2 828 aa-1.19□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms