RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	NEBL	O76041	1014 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	TM7SF2	O76062	418 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	UBTFL1	P0CB47	393 aa	Predicted RBP	2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	ZSCAN5DP	P0CG00	497 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	TRIM49	P0CI25	452 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	TRIM49C	P0CI26	452 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	NPIPA8	P0DM63	369 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	HSD17B1	P14061	328 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	SPR	P35270	261 aa	Predicted RBP	2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	AIF1	P55008	147 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	ATP5I	P56385	69 aa	Predicted RBP	2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	NTHL1	P78549	312 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	CALCOCO2	Q13137	446 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	GANAB	Q14697	944 aa	Known RBP	2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	RAB35	Q15286	201 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	UBE2V2	Q15819	145 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	SYPL1	Q16563	259 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	PMF1	Q6P1K2	205 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	SCYL2	Q6P3W7	929 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	ZNF530	Q6P9A1	599 aa	Predicted RBP	2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	METTL7B	Q6UX53	244 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	APOOL	Q6UXV4	268 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	ZNF841	Q6ZN19	808 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267		Q6ZPB1	254 aa	Predicted RBP	2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	EFL1	Q7Z2Z2	1120 aa	Known RBP	2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	LRRTM1	Q86UE6	522 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	LRRC75A-AS1	Q8N1F1	130 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	ARL14	Q8N4G2	192 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	C11orf45	Q8TAV5	145 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	FNDC8	Q8TC99	324 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	LRRC15	Q8TF66	581 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	FAM3C	Q92520	227 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	GTF3A	Q92664	365 aa	Known RBP	2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	TPD52L3	Q96J77	140 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	ATF6B	Q99941	703 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	RPP25	Q9BUL9	199 aa	Known RBP	2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	CAPS2	Q9BXY5	557 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	FGFBP2	Q9BYJ0	223 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	OCR1	Q9BZK8	76 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	TRIM9	Q9C026	710 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	GFRA4	Q9GZZ7	299 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	ELOVL3	Q9HB03	270 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	IL1RL2	Q9HB29	575 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	TM9SF3	Q9HD45	589 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	ESM1	Q9NQ30	184 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	PIPOX	Q9P0Z9	390 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	THAP10	Q9P2Z0	257 aa	Predicted RBP	2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	CACNG5	Q9UF02	275 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	MLX	Q9UH92	298 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	CRLS1	Q9UJA2	301 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	NPIPA1	Q9UND3	350 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	DLG5	Q8TDM6	1919 aa		2.8	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	FMN2	Q9NZ56	1722 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	RIMS1	Q86UR5	1692 aa	Known RBP	2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	NRK	Q7Z2Y5	1582 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	SLIT1	O75093	1534 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	ARHGAP23	Q9P227	1491 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	CRB1	P82279	1406 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	MSH6	P52701	1360 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	IGLV4-3	A0A075B6K6	122 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	TRAV26-1	A0A087WT03	109 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	IGKV3D-20	A0A0C4DH25	116 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267		A0A1B0GU03	582 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	NDUFAF8	A1L188	74 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	ERI2	A8K979	691 aa	Known RBP	2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	C11orf98	E9PRG8	122 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	PDHX	O00330	501 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	CASK	O14936	926 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	PPIH	O43447	177 aa	Known RBP	2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	LCMT2	O60294	686 aa	Known RBP	2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	B4GALT2	O60909	372 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	TRIM3	O75382	744 aa	Predicted RBP	2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	B3GAT3	O94766	335 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	SORBS2	O94875	1100 aa	Known RBP	2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	IL1B	P01584	269 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	IGF1	P05019	195 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	H2BFM	P0C1H6	154 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	PGC	P20142	388 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	UGT1A4	P22310	534 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	IGFBP5	P24593	272 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	GRIA1	P42261	906 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	SLC1A4	P43007	532 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	RPL23A	P62750	156 aa	Known RBP	2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	RPS6	P62753	249 aa	Known RBP	2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	TNFRSF17	Q02223	184 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	MAP2K1	Q02750	393 aa	Predicted RBP	2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	LY6D	Q14210	128 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	CAMK4	Q16566	473 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	VWA2	Q5GFL6	755 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	REP15	Q6BDI9	236 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	FAM71F2	Q6NXP2	309 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	PNCK	Q6P2M8	343 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	NLRP9	Q7RTR0	991 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	TAS2R42	Q7RTR8	314 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	HSD11B1L	Q7Z5J1	315 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	TRPV1	Q8NER1	839 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	PRSS33	Q8NF86	280 aa		2.79	□□□□□ -1.96
CALCOCO2-223	ENST00000514267	FLVCR1-AS1	Q8TAF5	88 aa		2.79	□□□□□ -1.96

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms