RNA–Protein interactions for RNA: ENST00000513438.1

POLR2J3-217, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3 BASIC

Gene POLR2J3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-217ENST00000513438 HMGN2P05204 90 aaKnown RBP11.94□□□□□ -0.5
POLR2J3-217ENST00000513438 TUBBP07437 444 aa11.94□□□□□ -0.5
POLR2J3-217ENST00000513438 LINGO3P0C6S8 592 aa11.94□□□□□ -0.5
POLR2J3-217ENST00000513438 NEFHP12036 1026 aa11.94□□□□□ -0.5
POLR2J3-217ENST00000513438 BCKDHAP12694 445 aa11.94□□□□□ -0.5
POLR2J3-217ENST00000513438 PSMB1P20618 241 aaKnown RBP11.94□□□□□ -0.5
POLR2J3-217ENST00000513438 SHC1P29353 583 aa11.94□□□□□ -0.5
POLR2J3-217ENST00000513438 AGTR1P30556 359 aa11.94□□□□□ -0.5
POLR2J3-217ENST00000513438 SFTPDP35247 375 aa11.94□□□□□ -0.5
POLR2J3-217ENST00000513438 ASMTP46597 345 aa11.94□□□□□ -0.5
POLR2J3-217ENST00000513438 NR1H2P55055 460 aa11.94□□□□□ -0.5
POLR2J3-217ENST00000513438 KANK2Q63ZY3 851 aa11.94□□□□□ -0.5
POLR2J3-217ENST00000513438 RNF165Q6ZSG1 346 aa11.94□□□□□ -0.5
POLR2J3-217ENST00000513438 R3HCC1LQ7Z5L2 792 aaKnown RBP11.94□□□□□ -0.5
POLR2J3-217ENST00000513438 TDRPQ86YL5 185 aa11.94□□□□□ -0.5
POLR2J3-217ENST00000513438 C4orf33Q8N1A6 199 aa11.94□□□□□ -0.5
POLR2J3-217ENST00000513438 ZNF611Q8N823 705 aa11.94□□□□□ -0.5
POLR2J3-217ENST00000513438 PHOSPHO1Q8TCT1 267 aa11.94□□□□□ -0.5
POLR2J3-217ENST00000513438 CDS1Q92903 461 aa11.94□□□□□ -0.5
POLR2J3-217ENST00000513438 REXO5Q96IC2 774 aaKnown RBP11.94□□□□□ -0.5
POLR2J3-217ENST00000513438 TMEM204Q9BSN7 226 aa11.94□□□□□ -0.5
POLR2J3-217ENST00000513438 OR10A4Q9H209 315 aa11.94□□□□□ -0.5
POLR2J3-217ENST00000513438 SIRT3Q9NTG7 399 aaPredicted RBP11.94□□□□□ -0.5
POLR2J3-217ENST00000513438 ZCCHC3Q9NUD5 404 aaKnown RBP11.94□□□□□ -0.5
POLR2J3-217ENST00000513438 GIN1Q9NXP7 522 aa11.94□□□□□ -0.5
POLR2J3-217ENST00000513438 TMED5Q9Y3A6 229 aa11.94□□□□□ -0.5
POLR2J3-217ENST00000513438 ZANQ9Y493 2812 aa11.94□□□□□ -0.5
POLR2J3-217ENST00000513438 HIVEP2P31629 2446 aa11.94□□□□□ -0.5
POLR2J3-217ENST00000513438 NUP214P35658 2090 aaPredicted RBP11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 INAFM1C9JVW0 142 aa11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 ZNF195O14628 629 aa11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 HS3ST1O14792 307 aa11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 OIP5O43482 229 aa11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 HSPA4LO95757 839 aa11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 NUDT14O95848 222 aa11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 FGF4P08620 206 aa11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 PABPC4LP0CB38 370 aaKnown RBP11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 PAX1P15863 534 aa11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 EIF1P41567 113 aaKnown RBP11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 RNF144AP50876 292 aaPredicted RBP11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 ZNF117Q03924 483 aa11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 LASP1Q14847 261 aaKnown RBP11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 PCLAFQ15004 111 aa11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 MLC1Q15049 377 aa11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 TSC22D1Q15714 1073 aa11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 UGT3A2Q3SY77 523 aa11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 TMEM201Q5SNT2 666 aa11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 CBLN3Q6UW01 205 aa11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 NUFIP2Q7Z417 695 aaKnown RBP11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 TUSC5Q8IXB3 177 aa11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 DDIASQ8IXT1 998 aa11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 STEAP2Q8NFT2 490 aa11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 OR7A2PQ8NGA2 310 aa11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 FBXO27Q8NI29 283 aa11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 ABHD3Q8WU67 409 aa11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 AKAP1Q92667 903 aaKnown RBP eCLIP11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 STACQ99469 402 aa11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 TRMOQ9BU70 441 aa11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 HDHD5Q9BXW7 423 aa11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 PIGUQ9H490 435 aa11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 CXorf56Q9H5V9 222 aa11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 TIGARQ9NQ88 270 aa11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 DUSP22Q9NRW4 184 aa11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 ZNF701Q9NV72 531 aaPredicted RBP11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 ATP6V1HQ9UI12 483 aa11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 MID2Q9UJV3 735 aa11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 TRAF6Q9Y4K3 522 aa11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 SNX8Q9Y5X2 465 aa11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 KCNE3Q9Y6H6 103 aa11.93□□□□□ -0.5
POLR2J3-217ENST00000513438 FREM1Q5H8C1 2179 aa11.92□□□□□ -0.5
POLR2J3-217ENST00000513438 NPIPA5A0A0B4J1W7 369 aa11.92□□□□□ -0.5
POLR2J3-217ENST00000513438 TMEM233B4DJY2 109 aa11.92□□□□□ -0.5
POLR2J3-217ENST00000513438 NPIPA7E9PJI5 369 aa11.92□□□□□ -0.5
POLR2J3-217ENST00000513438 PIP5K1BO14986 540 aa11.92□□□□□ -0.5
POLR2J3-217ENST00000513438 GCM2O75603 506 aaPredicted RBP11.92□□□□□ -0.5
POLR2J3-217ENST00000513438 CHRNGP07510 517 aa11.92□□□□□ -0.5
POLR2J3-217ENST00000513438 NPIPA8P0DM63 369 aa11.92□□□□□ -0.5
POLR2J3-217ENST00000513438 LAMP1P11279 417 aa11.92□□□□□ -0.5
POLR2J3-217ENST00000513438 NID1P14543 1247 aa11.92□□□□□ -0.5
POLR2J3-217ENST00000513438 ATP6V1C1P21283 382 aa11.92□□□□□ -0.5
POLR2J3-217ENST00000513438 ADH6P28332 368 aa11.92□□□□□ -0.5
POLR2J3-217ENST00000513438 CCT3P49368 545 aaKnown RBP11.92□□□□□ -0.5
POLR2J3-217ENST00000513438 P2RX1P51575 399 aa11.92□□□□□ -0.5
POLR2J3-217ENST00000513438 ATP5J2P56134 94 aa11.92□□□□□ -0.5
POLR2J3-217ENST00000513438 FOXF1Q12946 379 aa11.92□□□□□ -0.5
POLR2J3-217ENST00000513438 TOMM34Q15785 309 aaPredicted RBP11.92□□□□□ -0.5
POLR2J3-217ENST00000513438 ZNF239Q16600 458 aaKnown RBP11.92□□□□□ -0.5
POLR2J3-217ENST00000513438 TMEM176BQ3YBM2 270 aaPredicted RBP11.92□□□□□ -0.5
POLR2J3-217ENST00000513438 KLHL26Q53HC5 615 aa11.92□□□□□ -0.5
POLR2J3-217ENST00000513438 CDC73Q6P1J9 531 aa11.92□□□□□ -0.5
POLR2J3-217ENST00000513438 CXXC5Q7LFL8 322 aaKnown RBP11.92□□□□□ -0.5
POLR2J3-217ENST00000513438 MTERF4Q7Z6M4 381 aaKnown RBP11.92□□□□□ -0.5
POLR2J3-217ENST00000513438 ATP6V1C2Q8NEY4 427 aa11.92□□□□□ -0.5
POLR2J3-217ENST00000513438 LILRB1Q8NHL6 650 aaPredicted RBP11.92□□□□□ -0.5
POLR2J3-217ENST00000513438 SPATA3Q8NHX4 192 aa11.92□□□□□ -0.5
POLR2J3-217ENST00000513438 RAB3IL1Q8TBN0 382 aa11.92□□□□□ -0.5
POLR2J3-217ENST00000513438 ADAMTS15Q8TE58 950 aa11.92□□□□□ -0.5
POLR2J3-217ENST00000513438 EPS8L3Q8TE67 593 aaKnown RBP11.92□□□□□ -0.5
POLR2J3-217ENST00000513438 TWIST2Q8WVJ9 160 aa11.92□□□□□ -0.5
POLR2J3-217ENST00000513438 CPNE4Q96A23 557 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms